RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ABCA6Q8N139 1617 aa10.31□□□□□ -0.76
CXCR4-202ENST00000409817 MS4A4AQ96JQ5 239 aa10.3□□□□□ -0.76
CXCR4-202ENST00000409817 MADDQ8WXG6 1647 aa10.3□□□□□ -0.76
CXCR4-202ENST00000409817 PPRC1Q5VV67 1664 aaKnown RBP10.3□□□□□ -0.76
CXCR4-202ENST00000409817 ST20-MTHFSA0A0A6YYL1 179 aa10.3□□□□□ -0.76
CXCR4-202ENST00000409817 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
CXCR4-202ENST00000409817 KIAA1210Q9ULL0 1709 aa10.29□□□□□ -0.76
CXCR4-202ENST00000409817 DIP2BQ9P265 1576 aa10.29□□□□□ -0.76
CXCR4-202ENST00000409817 DIP2CQ9Y2E4 1556 aa10.29□□□□□ -0.76
CXCR4-202ENST00000409817 MYOM2P54296 1465 aa10.29□□□□□ -0.76
CXCR4-202ENST00000409817 KIF1BO60333 1816 aa10.29□□□□□ -0.76
CXCR4-202ENST00000409817 ZMYM4Q5VZL5 1548 aa10.28□□□□□ -0.76
CXCR4-202ENST00000409817 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
CXCR4-202ENST00000409817 ZC3H13Q5T200 1668 aaKnown RBP10.27□□□□□ -0.76
CXCR4-202ENST00000409817 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
CXCR4-202ENST00000409817 ABCC3O15438 1527 aa10.27□□□□□ -0.77
CXCR4-202ENST00000409817 NCKAP5LQ9HCH0 1330 aa10.26□□□□□ -0.77
CXCR4-202ENST00000409817 ARHGAP31Q2M1Z3 1444 aa10.26□□□□□ -0.77
CXCR4-202ENST00000409817 COL17A1Q9UMD9 1497 aaPredicted RBP10.26□□□□□ -0.77
CXCR4-202ENST00000409817 RAPGEF3O95398 923 aa10.25□□□□□ -0.77
CXCR4-202ENST00000409817 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
CXCR4-202ENST00000409817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
CXCR4-202ENST00000409817 NPATQ14207 1427 aa10.25□□□□□ -0.77
CXCR4-202ENST00000409817 SCAF11Q99590 1463 aaKnown RBP10.25□□□□□ -0.77
CXCR4-202ENST00000409817 ADGRB3O60242 1522 aa10.24□□□□□ -0.77
CXCR4-202ENST00000409817 REREQ9P2R6 1566 aa10.24□□□□□ -0.77
CXCR4-202ENST00000409817 CAMSAP1Q5T5Y3 1602 aa10.24□□□□□ -0.77
CXCR4-202ENST00000409817 IQGAP1P46940 1657 aa10.24□□□□□ -0.77
CXCR4-202ENST00000409817 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
CXCR4-202ENST00000409817 WASHC2CQ9Y4E1 1318 aa10.24□□□□□ -0.77
CXCR4-202ENST00000409817 EIF3AQ14152 1382 aaKnown RBP10.24□□□□□ -0.77
CXCR4-202ENST00000409817 IFT172Q9UG01 1749 aa10.24□□□□□ -0.77
CXCR4-202ENST00000409817 TMF1P82094 1093 aa10.23□□□□□ -0.77
CXCR4-202ENST00000409817 RPGRIP1LQ68CZ1 1315 aa10.23□□□□□ -0.77
CXCR4-202ENST00000409817 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
CXCR4-202ENST00000409817 NOS1P29475 1434 aa10.23□□□□□ -0.77
CXCR4-202ENST00000409817 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
CXCR4-202ENST00000409817 GGT6Q6P531 493 aa10.23□□□□□ -0.77
CXCR4-202ENST00000409817 TESK2Q96S53 571 aa10.23□□□□□ -0.77
CXCR4-202ENST00000409817 LMOD2Q6P5Q4 547 aa10.22□□□□□ -0.77
CXCR4-202ENST00000409817 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
CXCR4-202ENST00000409817 RALBP1Q15311 655 aa10.21□□□□□ -0.77
CXCR4-202ENST00000409817 E2F4Q16254 413 aa10.21□□□□□ -0.77
CXCR4-202ENST00000409817 MS4A3Q96HJ5 214 aa10.21□□□□□ -0.77
CXCR4-202ENST00000409817 POLR3GLQ9BT43 218 aa10.21□□□□□ -0.77
CXCR4-202ENST00000409817 MRS2Q9HD23 443 aa10.21□□□□□ -0.77
CXCR4-202ENST00000409817 AGLP35573 1532 aa10.21□□□□□ -0.77
CXCR4-202ENST00000409817 TMEM106CQ9BVX2 250 aa10.21□□□□□ -0.78
CXCR4-202ENST00000409817 UGGT1Q9NYU2 1555 aa10.21□□□□□ -0.78
CXCR4-202ENST00000409817 YEATS2Q9ULM3 1422 aa10.2□□□□□ -0.78
CXCR4-202ENST00000409817 PIK3C2BO00750 1634 aa10.2□□□□□ -0.78
CXCR4-202ENST00000409817 SETBP1Q9Y6X0 1596 aa10.2□□□□□ -0.78
CXCR4-202ENST00000409817 MROH2AA6NES4 1674 aa10.2□□□□□ -0.78
CXCR4-202ENST00000409817 CRISPLD2Q9H0B8 497 aa10.19□□□□□ -0.78
CXCR4-202ENST00000409817 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
CXCR4-202ENST00000409817 PPLO60437 1756 aa10.18□□□□□ -0.78
CXCR4-202ENST00000409817 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
CXCR4-202ENST00000409817 HNRNPUQ00839 825 aaKnown RBP eCLIP10.18□□□□□ -0.78
CXCR4-202ENST00000409817 BRD4O60885 1362 aaPredicted RBP10.18□□□□□ -0.78
CXCR4-202ENST00000409817 DISP3Q9P2K9 1392 aa10.18□□□□□ -0.78
CXCR4-202ENST00000409817 MFSD10Q14728 455 aa10.17□□□□□ -0.78
CXCR4-202ENST00000409817 SBNO2Q9Y2G9 1366 aa10.17□□□□□ -0.78
CXCR4-202ENST00000409817 MYBBP1AQ9BQG0 1328 aaKnown RBP10.17□□□□□ -0.78
CXCR4-202ENST00000409817 PIK3C2GO75747 1445 aa10.17□□□□□ -0.78
CXCR4-202ENST00000409817 SYNMO15061 1565 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 SEMA3EO15041 775 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 PER1O15534 1290 aaPredicted RBP10.16□□□□□ -0.78
CXCR4-202ENST00000409817 LARP6Q9BRS8 491 aaKnown RBP10.16□□□□□ -0.78
CXCR4-202ENST00000409817 TSPOAP1O95153 1857 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 MYO3AQ8NEV4 1616 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 PARD3Q8TEW0 1356 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 ZBED9Q6R2W3 1325 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 ADGRF5Q8IZF2 1346 aa10.16□□□□□ -0.78
CXCR4-202ENST00000409817 ZFYVE9O95405 1425 aa10.15□□□□□ -0.78
CXCR4-202ENST00000409817 CCDC184Q52MB2 194 aa10.15□□□□□ -0.78
CXCR4-202ENST00000409817 ILDR1Q86SU0 546 aaPredicted RBP10.15□□□□□ -0.78
CXCR4-202ENST00000409817 KIF13AQ9H1H9 1805 aa10.15□□□□□ -0.78
CXCR4-202ENST00000409817 C14orf93Q9H972 538 aaKnown RBP10.15□□□□□ -0.79
CXCR4-202ENST00000409817 PREX1Q8TCU6 1659 aa10.14□□□□□ -0.79
CXCR4-202ENST00000409817 TESPA1A2RU30 521 aaPredicted RBP10.14□□□□□ -0.79
CXCR4-202ENST00000409817 CFAP70Q5T0N1 1121 aa10.14□□□□□ -0.79
CXCR4-202ENST00000409817 FAM9BQ8IZU0 186 aa10.14□□□□□ -0.79
CXCR4-202ENST00000409817 CFAP65Q6ZU64 1925 aaKnown RBP10.14□□□□□ -0.79
CXCR4-202ENST00000409817 ARHGEF40Q8TER5 1519 aa10.14□□□□□ -0.79
CXCR4-202ENST00000409817 NLRP13Q86W25 1043 aa10.13□□□□□ -0.79
CXCR4-202ENST00000409817 TMC1Q8TDI8 760 aa10.13□□□□□ -0.79
CXCR4-202ENST00000409817 KDM5AP29375 1690 aaKnown RBP10.13□□□□□ -0.79
CXCR4-202ENST00000409817 INSRP06213 1382 aa10.13□□□□□ -0.79
CXCR4-202ENST00000409817 NEXMIFQ5QGS0 1516 aa10.13□□□□□ -0.79
CXCR4-202ENST00000409817 NEFLP07196 543 aa10.13□□□□□ -0.79
CXCR4-202ENST00000409817 PDE4AP27815 886 aa10.13□□□□□ -0.79
CXCR4-202ENST00000409817 SUPT16HQ9Y5B9 1047 aaKnown RBP10.13□□□□□ -0.79
CXCR4-202ENST00000409817 NPC1L1Q9UHC9 1359 aa10.12□□□□□ -0.79
CXCR4-202ENST00000409817 PANK3Q9H999 370 aa10.12□□□□□ -0.79
CXCR4-202ENST00000409817 ADGRB1O14514 1584 aa10.12□□□□□ -0.79
CXCR4-202ENST00000409817 TTLL13PA6NNM8 815 aa10.11□□□□□ -0.79
CXCR4-202ENST00000409817 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
CXCR4-202ENST00000409817 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
CXCR4-202ENST00000409817 ERVK-7P63135 1459 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms