RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 PRAM1Q96QH2 718 aa26.39■■□□□ 1.82
LIMS2-207ENST00000409808 LTKP29376 864 aa26.38■■□□□ 1.81
LIMS2-207ENST00000409808 ERICH6Q7L0X2 663 aa26.37■■□□□ 1.81
LIMS2-207ENST00000409808 HDGFP51858 240 aaKnown RBP26.37■■□□□ 1.81
LIMS2-207ENST00000409808 TULP4Q9NRJ4 1543 aa26.36■■□□□ 1.81
LIMS2-207ENST00000409808 POGKQ9P215 609 aa26.36■■□□□ 1.81
LIMS2-207ENST00000409808 KNSTRNQ9Y448 316 aa26.36■■□□□ 1.81
LIMS2-207ENST00000409808 PARD3Q8TEW0 1356 aa26.36■■□□□ 1.81
LIMS2-207ENST00000409808 METP08581 1390 aa26.36■■□□□ 1.81
LIMS2-207ENST00000409808 MINK1Q8N4C8 1332 aaPredicted RBP26.35■■□□□ 1.81
LIMS2-207ENST00000409808 NLRP13Q86W25 1043 aa26.33■■□□□ 1.81
LIMS2-207ENST00000409808 SLC12A5Q9H2X9 1139 aa26.33■■□□□ 1.81
LIMS2-207ENST00000409808 CABP2Q9NPB3 220 aa26.33■■□□□ 1.81
LIMS2-207ENST00000409808 EVC2Q86UK5 1308 aa26.33■■□□□ 1.81
LIMS2-207ENST00000409808 WAPLQ7Z5K2 1190 aa26.32■■□□□ 1.8
LIMS2-207ENST00000409808 TXNDC2Q86VQ3 553 aa26.32■■□□□ 1.8
LIMS2-207ENST00000409808 CCDC136Q96JN2 1154 aa26.32■■□□□ 1.8
LIMS2-207ENST00000409808 INSRP06213 1382 aa26.32■■□□□ 1.8
LIMS2-207ENST00000409808 PDE3BQ13370 1112 aa26.31■■□□□ 1.8
LIMS2-207ENST00000409808 AMER1Q5JTC6 1135 aaPredicted RBP26.31■■□□□ 1.8
LIMS2-207ENST00000409808 CARD14Q9BXL6 1004 aa26.31■■□□□ 1.8
LIMS2-207ENST00000409808 ADAMTSL3P82987 1691 aa26.3■■□□□ 1.8
LIMS2-207ENST00000409808 PLEKHH1Q9ULM0 1364 aa26.29■■□□□ 1.8
LIMS2-207ENST00000409808 ADAMTS13Q76LX8 1427 aa26.26■■□□□ 1.79
LIMS2-207ENST00000409808 SRPK2P78362 688 aaKnown RBP26.26■■□□□ 1.79
LIMS2-207ENST00000409808 EID1Q9Y6B2 187 aa26.26■■□□□ 1.79
LIMS2-207ENST00000409808 ABCC11Q96J66 1382 aa26.25■■□□□ 1.79
LIMS2-207ENST00000409808 THEMISQ8N1K5 641 aaPredicted RBP26.25■■□□□ 1.79
LIMS2-207ENST00000409808 SLC26A8Q96RN1 970 aa26.25■■□□□ 1.79
LIMS2-207ENST00000409808 PLEKHG1Q9ULL1 1385 aa26.24■■□□□ 1.79
LIMS2-207ENST00000409808 SLIT1O75093 1534 aa26.24■■□□□ 1.79
LIMS2-207ENST00000409808 ARHGAP23Q9P227 1491 aa26.24■■□□□ 1.79
LIMS2-207ENST00000409808 DLC1Q96QB1 1528 aa26.23■■□□□ 1.79
LIMS2-207ENST00000409808 CEP170BQ9Y4F5 1589 aaPredicted RBP26.21■■□□□ 1.79
LIMS2-207ENST00000409808 PUS7Q96PZ0 661 aaKnown RBP26.2■■□□□ 1.79
LIMS2-207ENST00000409808 CDK19Q9BWU1 502 aa26.2■■□□□ 1.79
LIMS2-207ENST00000409808 NSD3Q9BZ95 1437 aa26.19■■□□□ 1.78
LIMS2-207ENST00000409808 SENP3-EIF4A1A0A087X0R7 540 aa26.19■■□□□ 1.78
LIMS2-207ENST00000409808 RRP1P56182 461 aaKnown RBP26.19■■□□□ 1.78
LIMS2-207ENST00000409808 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
LIMS2-207ENST00000409808 RCAN3Q9UKA8 241 aa26.16■■□□□ 1.78
LIMS2-207ENST00000409808 NPC1L1Q9UHC9 1359 aa26.15■■□□□ 1.78
LIMS2-207ENST00000409808 MED14O60244 1454 aa26.15■■□□□ 1.78
LIMS2-207ENST00000409808 KNDC1Q76NI1 1749 aa26.15■■□□□ 1.78
LIMS2-207ENST00000409808 ROBO2Q9HCK4 1378 aa26.13■■□□□ 1.77
LIMS2-207ENST00000409808 TECPR2O15040 1411 aa26.13■■□□□ 1.77
LIMS2-207ENST00000409808 PTPRUQ92729 1446 aa26.13■■□□□ 1.77
LIMS2-207ENST00000409808 ANKRD36BQ8N2N9 1353 aa26.12■■□□□ 1.77
LIMS2-207ENST00000409808 CPS1P31327 1500 aa26.12■■□□□ 1.77
LIMS2-207ENST00000409808 BLMP54132 1417 aaPredicted RBP26.11■■□□□ 1.77
LIMS2-207ENST00000409808 ATAD2Q6PL18 1390 aa26.11■■□□□ 1.77
LIMS2-207ENST00000409808 SETD1BQ9UPS6 1966 aaKnown RBP26.1■■□□□ 1.77
LIMS2-207ENST00000409808 FAM135BQ49AJ0 1406 aa26.1■■□□□ 1.77
LIMS2-207ENST00000409808 NOP58Q9Y2X3 529 aaKnown RBP26.09■■□□□ 1.77
LIMS2-207ENST00000409808 A0A1W2PP64 1363 aa26.09■■□□□ 1.77
LIMS2-207ENST00000409808 CABP1Q9NZU7 370 aa26.09■■□□□ 1.77
LIMS2-207ENST00000409808 SIRT1Q96EB6 747 aa26.08■■□□□ 1.77
LIMS2-207ENST00000409808 TBX22Q9Y458 520 aa26.08■■□□□ 1.77
LIMS2-207ENST00000409808 ZNF142P52746 1687 aaPredicted RBP26.07■■□□□ 1.76
LIMS2-207ENST00000409808 WASLO00401 505 aaPredicted RBP26.07■■□□□ 1.76
LIMS2-207ENST00000409808 ANP32AP39687 249 aaKnown RBP26.06■■□□□ 1.76
LIMS2-207ENST00000409808 AMOTL2Q9Y2J4 779 aa26.06■■□□□ 1.76
LIMS2-207ENST00000409808 CD163L1Q9NR16 1453 aa26.06■■□□□ 1.76
LIMS2-207ENST00000409808 TNNT2P45379 298 aaPredicted RBP26.05■■□□□ 1.76
LIMS2-207ENST00000409808 NINLQ9Y2I6 1382 aa26.05■■□□□ 1.76
LIMS2-207ENST00000409808 TCERG1O14776 1098 aaKnown RBP26.04■■□□□ 1.76
LIMS2-207ENST00000409808 CGNL1Q0VF96 1302 aa26.04■■□□□ 1.76
LIMS2-207ENST00000409808 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.03■■□□□ 1.76
LIMS2-207ENST00000409808 MORC1Q86VD1 984 aa26.03■■□□□ 1.76
LIMS2-207ENST00000409808 NCKAP5LQ9HCH0 1330 aa26.03■■□□□ 1.76
LIMS2-207ENST00000409808 USP32Q8NFA0 1604 aa26.02■■□□□ 1.76
LIMS2-207ENST00000409808 ANKLE2Q86XL3 938 aa26.02■■□□□ 1.76
LIMS2-207ENST00000409808 EXOC6Q8TAG9 804 aa26.02■■□□□ 1.76
LIMS2-207ENST00000409808 TERF2IPQ9NYB0 399 aa26.02■■□□□ 1.76
LIMS2-207ENST00000409808 IPO9Q96P70 1041 aaKnown RBP26.01■■□□□ 1.75
LIMS2-207ENST00000409808 DIP2AQ14689 1571 aa25.99■■□□□ 1.75
LIMS2-207ENST00000409808 NUDT16Q96DE0 195 aaKnown RBP25.98■■□□□ 1.75
LIMS2-207ENST00000409808 HDGFL2Q7Z4V5 671 aaPredicted RBP25.97■■□□□ 1.75
LIMS2-207ENST00000409808 NUTM2FA1L443 756 aa25.97■■□□□ 1.75
LIMS2-207ENST00000409808 MS4A1P11836 297 aa25.97■■□□□ 1.75
LIMS2-207ENST00000409808 ADAMTS8Q9UP79 889 aa25.97■■□□□ 1.75
LIMS2-207ENST00000409808 GGNBP2Q9H3C7 697 aa25.96■■□□□ 1.75
LIMS2-207ENST00000409808 SALL2Q9Y467 1007 aaPredicted RBP25.96■■□□□ 1.75
LIMS2-207ENST00000409808 PPIP5K1Q6PFW1 1433 aa25.96■■□□□ 1.75
LIMS2-207ENST00000409808 PRR36Q9H6K5 1346 aa25.95■■□□□ 1.75
LIMS2-207ENST00000409808 KCNA6P17658 529 aa25.94■■□□□ 1.74
LIMS2-207ENST00000409808 BCL11AQ9H165 835 aa25.94■■□□□ 1.74
LIMS2-207ENST00000409808 CDCA7LQ96GN5 454 aa25.93■■□□□ 1.74
LIMS2-207ENST00000409808 FYB1O15117 783 aa25.93■■□□□ 1.74
LIMS2-207ENST00000409808 XRN1Q8IZH2 1706 aaKnown RBP25.92■■□□□ 1.74
LIMS2-207ENST00000409808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.92■■□□□ 1.74
LIMS2-207ENST00000409808 WDR43Q15061 677 aaKnown RBP eCLIP25.91■■□□□ 1.74
LIMS2-207ENST00000409808 CCDC61Q9Y6R9 512 aa25.91■■□□□ 1.74
LIMS2-207ENST00000409808 PTCH1Q13635 1447 aa25.91■■□□□ 1.74
LIMS2-207ENST00000409808 ZBTB47Q9UFB7 747 aaPredicted RBP25.91■■□□□ 1.74
LIMS2-207ENST00000409808 ATP7BP35670 1465 aa25.91■■□□□ 1.74
LIMS2-207ENST00000409808 ADGRB2O60241 1585 aa25.9■■□□□ 1.74
LIMS2-207ENST00000409808 NSD2O96028 1365 aa25.9■■□□□ 1.74
LIMS2-207ENST00000409808 MTHFSP49914 203 aa25.87■■□□□ 1.73
LIMS2-207ENST00000409808 CPSF1Q10570 1443 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms