RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CCDC66A2RUB6 948 aa17.31■□□□□ 0.36
DUSP28-202ENST00000405954 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
DUSP28-202ENST00000405954 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
DUSP28-202ENST00000405954 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
DUSP28-202ENST00000405954 PLEKHD1A6NEE1 506 aa17.3■□□□□ 0.36
DUSP28-202ENST00000405954 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
DUSP28-202ENST00000405954 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
DUSP28-202ENST00000405954 APPP05067 770 aa17.29■□□□□ 0.36
DUSP28-202ENST00000405954 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
DUSP28-202ENST00000405954 DUSP27Q5VZP5 1158 aa17.29■□□□□ 0.36
DUSP28-202ENST00000405954 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
DUSP28-202ENST00000405954 PPP1R9BQ96SB3 815 aa17.29■□□□□ 0.36
DUSP28-202ENST00000405954 TMEM51Q9NW97 253 aa17.28■□□□□ 0.36
DUSP28-202ENST00000405954 GPATCH8Q9UKJ3 1502 aaKnown RBP17.28■□□□□ 0.36
DUSP28-202ENST00000405954 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.36
DUSP28-202ENST00000405954 ROCK1Q13464 1354 aa17.27■□□□□ 0.36
DUSP28-202ENST00000405954 ANKRD30AQ9BXX3 1397 aa17.27■□□□□ 0.36
DUSP28-202ENST00000405954 U2AF2P26368 475 aaKnown RBP eCLIP17.26■□□□□ 0.35
DUSP28-202ENST00000405954 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
DUSP28-202ENST00000405954 SYCE3A1L190 88 aa17.25■□□□□ 0.35
DUSP28-202ENST00000405954 ZNF500O60304 480 aaPredicted RBP17.24■□□□□ 0.35
DUSP28-202ENST00000405954 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
DUSP28-202ENST00000405954 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
DUSP28-202ENST00000405954 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
DUSP28-202ENST00000405954 TROQ12816 1431 aaPredicted RBP17.24■□□□□ 0.35
DUSP28-202ENST00000405954 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
DUSP28-202ENST00000405954 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
DUSP28-202ENST00000405954 RBSNQ9H1K0 784 aa17.23■□□□□ 0.35
DUSP28-202ENST00000405954 ZSCAN23Q3MJ62 389 aa17.23■□□□□ 0.35
DUSP28-202ENST00000405954 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
DUSP28-202ENST00000405954 KIAA0586Q9BVV6 1533 aa17.22■□□□□ 0.35
DUSP28-202ENST00000405954 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
DUSP28-202ENST00000405954 ATP2B3Q16720 1220 aa17.22■□□□□ 0.35
DUSP28-202ENST00000405954 MCM5P33992 734 aa17.21■□□□□ 0.35
DUSP28-202ENST00000405954 MYRIPQ8NFW9 859 aa17.21■□□□□ 0.35
DUSP28-202ENST00000405954 KDM5CP41229 1560 aa17.21■□□□□ 0.35
DUSP28-202ENST00000405954 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.35
DUSP28-202ENST00000405954 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
DUSP28-202ENST00000405954 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
DUSP28-202ENST00000405954 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
DUSP28-202ENST00000405954 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
DUSP28-202ENST00000405954 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
DUSP28-202ENST00000405954 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
DUSP28-202ENST00000405954 EIF4G3O43432 1585 aaKnown RBP17.2■□□□□ 0.34
DUSP28-202ENST00000405954 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
DUSP28-202ENST00000405954 DISP3Q9P2K9 1392 aa17.19■□□□□ 0.34
DUSP28-202ENST00000405954 PDE3AQ14432 1141 aa17.19■□□□□ 0.34
DUSP28-202ENST00000405954 C17orf53Q8N3J3 647 aaPredicted RBP17.19■□□□□ 0.34
DUSP28-202ENST00000405954 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
DUSP28-202ENST00000405954 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
DUSP28-202ENST00000405954 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
DUSP28-202ENST00000405954 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
DUSP28-202ENST00000405954 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
DUSP28-202ENST00000405954 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
DUSP28-202ENST00000405954 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
DUSP28-202ENST00000405954 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
DUSP28-202ENST00000405954 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
DUSP28-202ENST00000405954 ZNF592Q92610 1267 aa17.17■□□□□ 0.34
DUSP28-202ENST00000405954 ZBTB9Q96C00 473 aa17.17■□□□□ 0.34
DUSP28-202ENST00000405954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.17■□□□□ 0.34
DUSP28-202ENST00000405954 DRC7Q8IY82 874 aa17.17■□□□□ 0.34
DUSP28-202ENST00000405954 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
DUSP28-202ENST00000405954 NOLC1Q14978 699 aaKnown RBP eCLIP17.16■□□□□ 0.34
DUSP28-202ENST00000405954 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
DUSP28-202ENST00000405954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
DUSP28-202ENST00000405954 NUCB2P80303 420 aa17.16■□□□□ 0.34
DUSP28-202ENST00000405954 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
DUSP28-202ENST00000405954 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
DUSP28-202ENST00000405954 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
DUSP28-202ENST00000405954 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
DUSP28-202ENST00000405954 TMF1P82094 1093 aa17.14■□□□□ 0.33
DUSP28-202ENST00000405954 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
DUSP28-202ENST00000405954 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
DUSP28-202ENST00000405954 TSPY26PQ9H489 355 aa17.12■□□□□ 0.33
DUSP28-202ENST00000405954 NPHP1O15259 732 aa17.11■□□□□ 0.33
DUSP28-202ENST00000405954 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
DUSP28-202ENST00000405954 USP25Q9UHP3 1055 aa17.11■□□□□ 0.33
DUSP28-202ENST00000405954 CCDC144AA2RUR9 1427 aa17.11■□□□□ 0.33
DUSP28-202ENST00000405954 POLR1AO95602 1720 aaPredicted RBP17.11■□□□□ 0.33
DUSP28-202ENST00000405954 SMC5Q8IY18 1101 aa17.11■□□□□ 0.33
DUSP28-202ENST00000405954 CALCOCO1Q9P1Z2 691 aa17.11■□□□□ 0.33
DUSP28-202ENST00000405954 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
DUSP28-202ENST00000405954 DHX37Q8IY37 1157 aaKnown RBP17.1■□□□□ 0.33
DUSP28-202ENST00000405954 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
DUSP28-202ENST00000405954 PLEKHH1Q9ULM0 1364 aa17.1■□□□□ 0.33
DUSP28-202ENST00000405954 CEP170Q5SW79 1584 aa17.1■□□□□ 0.33
DUSP28-202ENST00000405954 PER1O15534 1290 aaPredicted RBP17.1■□□□□ 0.33
DUSP28-202ENST00000405954 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
DUSP28-202ENST00000405954 GAS2L2Q8NHY3 880 aa17.09■□□□□ 0.33
DUSP28-202ENST00000405954 ANKRD45Q5TZF3 282 aa17.08■□□□□ 0.33
DUSP28-202ENST00000405954 KIF16BQ96L93 1317 aa17.08■□□□□ 0.32
DUSP28-202ENST00000405954 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
DUSP28-202ENST00000405954 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
DUSP28-202ENST00000405954 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
DUSP28-202ENST00000405954 PHF14O94880 888 aa17.07■□□□□ 0.32
DUSP28-202ENST00000405954 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
DUSP28-202ENST00000405954 ATP10BO94823 1461 aa17.07■□□□□ 0.32
DUSP28-202ENST00000405954 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
DUSP28-202ENST00000405954 ZNF445P59923 1031 aa17.06■□□□□ 0.32
DUSP28-202ENST00000405954 LRSAM1Q6UWE0 723 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms