RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
COL4A3BP-204ENST00000405807 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
COL4A3BP-204ENST00000405807 VIRMAQ69YN4 1812 aaKnown RBP20.49■□□□□ 0.87
COL4A3BP-204ENST00000405807 SEC24BO95487 1268 aa20.49■□□□□ 0.87
COL4A3BP-204ENST00000405807 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
COL4A3BP-204ENST00000405807 COG6Q9Y2V7 657 aa20.48■□□□□ 0.87
COL4A3BP-204ENST00000405807 POGKQ9P215 609 aa20.47■□□□□ 0.87
COL4A3BP-204ENST00000405807 PPP4R3BQ5MIZ7 849 aa20.46■□□□□ 0.87
COL4A3BP-204ENST00000405807 PMFBP1Q8TBY8 1022 aa20.46■□□□□ 0.87
COL4A3BP-204ENST00000405807 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
COL4A3BP-204ENST00000405807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■■■■ 42.9
COL4A3BP-204ENST00000405807 TTC37Q6PGP7 1564 aa20.46■□□□□ 0.87
COL4A3BP-204ENST00000405807 PANK1Q8TE04 598 aa20.46■□□□□ 0.87
COL4A3BP-204ENST00000405807 WWC1Q8IX03 1113 aa20.45■□□□□ 0.86
COL4A3BP-204ENST00000405807 SLKQ9H2G2 1235 aaPredicted RBP20.45■□□□□ 0.86
COL4A3BP-204ENST00000405807 PRDM10Q9NQV6 1147 aa20.44■□□□□ 0.86
COL4A3BP-204ENST00000405807 MYOM1P52179 1685 aa20.43■□□□□ 0.86
COL4A3BP-204ENST00000405807 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
COL4A3BP-204ENST00000405807 ZMYM3Q14202 1370 aa20.43■□□□□ 0.86
COL4A3BP-204ENST00000405807 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
COL4A3BP-204ENST00000405807 MAP7D2Q96T17 732 aa20.41■□□□□ 0.86
COL4A3BP-204ENST00000405807 SPHKAPQ2M3C7 1700 aa20.41■□□□□ 0.86
COL4A3BP-204ENST00000405807 KDM5AP29375 1690 aaKnown RBP20.41■□□□□ 0.86
COL4A3BP-204ENST00000405807 ANP32BQ92688 251 aaKnown RBP20.41■□□□□ 0.86
COL4A3BP-204ENST00000405807 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
COL4A3BP-204ENST00000405807 TRPM2O94759 1503 aa20.41■□□□□ 0.86
COL4A3BP-204ENST00000405807 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
COL4A3BP-204ENST00000405807 DMTNQ08495 405 aa20.4■□□□□ 0.86
COL4A3BP-204ENST00000405807 TBC1D32Q96NH3 1257 aa20.4■□□□□ 0.86
COL4A3BP-204ENST00000405807 BCCIPQ9P287 314 aaKnown RBP eCLIP20.39■□□□□ 0.85
COL4A3BP-204ENST00000405807 PTPRTO14522 1441 aa20.39■□□□□ 0.85
COL4A3BP-204ENST00000405807 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.85
COL4A3BP-204ENST00000405807 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
COL4A3BP-204ENST00000405807 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
COL4A3BP-204ENST00000405807 TBC1D2Q9BYX2 928 aa20.36■□□□□ 0.85
COL4A3BP-204ENST00000405807 RWDD1Q9H446 243 aaPredicted RBP20.36■□□□□ 0.85
COL4A3BP-204ENST00000405807 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
COL4A3BP-204ENST00000405807 CEP152O94986 1710 aa20.36■□□□□ 0.85
COL4A3BP-204ENST00000405807 PDZRN3Q9UPQ7 1066 aa20.35■□□□□ 0.85
COL4A3BP-204ENST00000405807 PCDHB15Q9Y5E8 787 aa20.35■□□□□ 0.85
COL4A3BP-204ENST00000405807 ESPNB1AK53 854 aa20.35■□□□□ 0.85
COL4A3BP-204ENST00000405807 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
COL4A3BP-204ENST00000405807 RUNDC1Q96C34 613 aa20.35■□□□□ 0.85
COL4A3BP-204ENST00000405807 ERVK-7P63135 1459 aa20.35■□□□□ 0.85
COL4A3BP-204ENST00000405807 PLCH2O75038 1416 aa20.34■□□□□ 0.85
COL4A3BP-204ENST00000405807 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
COL4A3BP-204ENST00000405807 RNF216Q9NWF9 866 aaPredicted RBP20.34■□□□□ 0.85
COL4A3BP-204ENST00000405807 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
COL4A3BP-204ENST00000405807 FAM13BQ9NYF5 915 aa20.34■□□□□ 0.85
COL4A3BP-204ENST00000405807 TNNT2P45379 298 aaPredicted RBP20.33■□□□□ 0.85
COL4A3BP-204ENST00000405807 NEUROD2Q15784 382 aa20.32■□□□□ 0.84
COL4A3BP-204ENST00000405807 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
COL4A3BP-204ENST00000405807 RGS22Q8NE09 1264 aa20.31■□□□□ 0.84
COL4A3BP-204ENST00000405807 CFAP70Q5T0N1 1121 aa20.31■□□□□ 0.84
COL4A3BP-204ENST00000405807 PANK2Q9BZ23 570 aa20.31■□□□□ 0.84
COL4A3BP-204ENST00000405807 GOLGA6L3A6NEY3 463 aa20.31■□□□□ 0.84
COL4A3BP-204ENST00000405807 RLBP1P12271 317 aa20.31■□□□□ 0.84
COL4A3BP-204ENST00000405807 SPAG9O60271 1321 aaKnown RBP20.3■□□□□ 0.84
COL4A3BP-204ENST00000405807 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
COL4A3BP-204ENST00000405807 TCP11L2Q8N4U5 519 aa20.3■□□□□ 0.84
COL4A3BP-204ENST00000405807 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
COL4A3BP-204ENST00000405807 RIPK4P57078 832 aa20.3■□□□□ 0.84
COL4A3BP-204ENST00000405807 ARID3AQ99856 593 aa20.3■□□□□ 0.84
COL4A3BP-204ENST00000405807 TRAPPC8Q9Y2L5 1435 aa20.3■□□□□ 0.84
COL4A3BP-204ENST00000405807 MCM4P33991 863 aa20.29■□□□□ 0.84
COL4A3BP-204ENST00000405807 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
COL4A3BP-204ENST00000405807 RTEL1-TNFRSF6BF6WH68 1400 aa20.28■□□□□ 0.84
COL4A3BP-204ENST00000405807 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
COL4A3BP-204ENST00000405807 CCDC27Q2M243 656 aa20.27■□□□□ 0.84
COL4A3BP-204ENST00000405807 CNPY4Q8N129 248 aa20.27■□□□□ 0.84
COL4A3BP-204ENST00000405807 KANK1Q14678 1352 aa20.27■□□□□ 0.84
COL4A3BP-204ENST00000405807 ABCC1P33527 1531 aa20.27■□□□□ 0.83
COL4A3BP-204ENST00000405807 FSD2A1L4K1 749 aa20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 ZSCAN20P17040 1043 aaPredicted RBP20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 CDK11BP21127 795 aaKnown RBP20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 NEURL4Q96JN8 1562 aa20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 IRX3P78415 501 aaPredicted RBP20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 MYH16Q9H6N6 1097 aa20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 SBNO2Q9Y2G9 1366 aa20.26■□□□□ 0.83
COL4A3BP-204ENST00000405807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.25■□□□□ 0.83
COL4A3BP-204ENST00000405807 KCNG1Q9UIX4 513 aa20.25■□□□□ 0.83
COL4A3BP-204ENST00000405807 MYOM2P54296 1465 aa20.25■□□□□ 0.83
COL4A3BP-204ENST00000405807 MVPQ14764 893 aaKnown RBP20.25■□□□□ 0.83
COL4A3BP-204ENST00000405807 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
COL4A3BP-204ENST00000405807 KIF20AO95235 890 aa20.24■□□□□ 0.83
COL4A3BP-204ENST00000405807 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
COL4A3BP-204ENST00000405807 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
COL4A3BP-204ENST00000405807 TET3O43151 1660 aa20.24■□□□□ 0.83
COL4A3BP-204ENST00000405807 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
COL4A3BP-204ENST00000405807 ADGRF5Q8IZF2 1346 aa20.23■□□□□ 0.83
COL4A3BP-204ENST00000405807 SPRYD3Q8NCJ5 442 aa20.23■□□□□ 0.83
COL4A3BP-204ENST00000405807 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
COL4A3BP-204ENST00000405807 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
COL4A3BP-204ENST00000405807 DNTTIP2Q5QJE6 756 aaKnown RBP20.22■□□□□ 0.83
COL4A3BP-204ENST00000405807 C14orf37Q86TY3 774 aa20.22■□□□□ 0.83
COL4A3BP-204ENST00000405807 MAP3K4Q9Y6R4 1608 aa20.22■□□□□ 0.83
COL4A3BP-204ENST00000405807 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
COL4A3BP-204ENST00000405807 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms