RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 SETD1AO15047 1707 aaKnown RBP12.73□□□□□ -0.37
PDE4D-207ENST00000405755 PPP2R1AP30153 589 aa12.73□□□□□ -0.37
PDE4D-207ENST00000405755 SUPT16HQ9Y5B9 1047 aaKnown RBP12.73□□□□□ -0.37
PDE4D-207ENST00000405755 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
PDE4D-207ENST00000405755 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
PDE4D-207ENST00000405755 ADAMTSL3P82987 1691 aa12.72□□□□□ -0.37
PDE4D-207ENST00000405755 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
PDE4D-207ENST00000405755 FKBP8Q14318 412 aa12.7□□□□□ -0.38
PDE4D-207ENST00000405755 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
PDE4D-207ENST00000405755 METP08581 1390 aa12.69□□□□□ -0.38
PDE4D-207ENST00000405755 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
PDE4D-207ENST00000405755 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
PDE4D-207ENST00000405755 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
PDE4D-207ENST00000405755 EID1Q9Y6B2 187 aa12.68□□□□□ -0.38
PDE4D-207ENST00000405755 ABCC11Q96J66 1382 aa12.68□□□□□ -0.38
PDE4D-207ENST00000405755 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
PDE4D-207ENST00000405755 WDR43Q15061 677 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDE4D-207ENST00000405755 TXNDC2Q86VQ3 553 aa12.68□□□□□ -0.38
PDE4D-207ENST00000405755 NINLQ9Y2I6 1382 aa12.68□□□□□ -0.38
PDE4D-207ENST00000405755 MYT1Q01538 1121 aa12.67□□□□□ -0.38
PDE4D-207ENST00000405755 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
PDE4D-207ENST00000405755 LTKP29376 864 aa12.67□□□□□ -0.38
PDE4D-207ENST00000405755 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
PDE4D-207ENST00000405755 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
PDE4D-207ENST00000405755 SALL2Q9Y467 1007 aaPredicted RBP12.67□□□□□ -0.38
PDE4D-207ENST00000405755 RIMS1Q86UR5 1692 aaKnown RBP12.66□□□□□ -0.38
PDE4D-207ENST00000405755 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
PDE4D-207ENST00000405755 TNNT2P45379 298 aaPredicted RBP12.65□□□□□ -0.38
PDE4D-207ENST00000405755 A0A1W2PP64 1363 aa12.65□□□□□ -0.38
PDE4D-207ENST00000405755 PLEKHG1Q9ULL1 1385 aa12.65□□□□□ -0.38
PDE4D-207ENST00000405755 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
PDE4D-207ENST00000405755 THEMISQ8N1K5 641 aaPredicted RBP12.65□□□□□ -0.38
PDE4D-207ENST00000405755 TERF2IPQ9NYB0 399 aa12.65□□□□□ -0.38
PDE4D-207ENST00000405755 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
PDE4D-207ENST00000405755 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
PDE4D-207ENST00000405755 ADAMTS8Q9UP79 889 aa12.64□□□□□ -0.39
PDE4D-207ENST00000405755 ADAMTS13Q76LX8 1427 aa12.64□□□□□ -0.39
PDE4D-207ENST00000405755 SLIT1O75093 1534 aa12.63□□□□□ -0.39
PDE4D-207ENST00000405755 CPS1P31327 1500 aa12.63□□□□□ -0.39
PDE4D-207ENST00000405755 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
PDE4D-207ENST00000405755 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
PDE4D-207ENST00000405755 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
PDE4D-207ENST00000405755 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
PDE4D-207ENST00000405755 NSD2O96028 1365 aa12.62□□□□□ -0.39
PDE4D-207ENST00000405755 INSRP06213 1382 aa12.62□□□□□ -0.39
PDE4D-207ENST00000405755 TECPR2O15040 1411 aa12.62□□□□□ -0.39
PDE4D-207ENST00000405755 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
PDE4D-207ENST00000405755 CABP1Q9NZU7 370 aa12.62□□□□□ -0.39
PDE4D-207ENST00000405755 ARHGAP23Q9P227 1491 aa12.62□□□□□ -0.39
PDE4D-207ENST00000405755 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
PDE4D-207ENST00000405755 WASLO00401 505 aaPredicted RBP12.6□□□□□ -0.39
PDE4D-207ENST00000405755 IRX6P78412 446 aaPredicted RBP12.6□□□□□ -0.39
PDE4D-207ENST00000405755 CD163L1Q9NR16 1453 aa12.6□□□□□ -0.39
PDE4D-207ENST00000405755 FBXO41Q8TF61 875 aa12.59□□□□□ -0.39
PDE4D-207ENST00000405755 SIRT1Q96EB6 747 aa12.59□□□□□ -0.39
PDE4D-207ENST00000405755 ROBO2Q9HCK4 1378 aa12.59□□□□□ -0.39
PDE4D-207ENST00000405755 GGNBP2Q9H3C7 697 aa12.58□□□□□ -0.4
PDE4D-207ENST00000405755 POLR3AO14802 1390 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-207ENST00000405755 PPIP5K1Q6PFW1 1433 aa12.58□□□□□ -0.4
PDE4D-207ENST00000405755 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
PDE4D-207ENST00000405755 MED14O60244 1454 aa12.57□□□□□ -0.4
PDE4D-207ENST00000405755 ATP7BP35670 1465 aa12.57□□□□□ -0.4
PDE4D-207ENST00000405755 PDE3BQ13370 1112 aa12.57□□□□□ -0.4
PDE4D-207ENST00000405755 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
PDE4D-207ENST00000405755 MTHFSP49914 203 aa12.57□□□□□ -0.4
PDE4D-207ENST00000405755 CCDC146Q8IYE0 955 aa12.57□□□□□ -0.4
PDE4D-207ENST00000405755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDE4D-207ENST00000405755 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
PDE4D-207ENST00000405755 AMOTL2Q9Y2J4 779 aa12.56□□□□□ -0.4
PDE4D-207ENST00000405755 TBX22Q9Y458 520 aa12.56□□□□□ -0.4
PDE4D-207ENST00000405755 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
PDE4D-207ENST00000405755 PTPRUQ92729 1446 aa12.56□□□□□ -0.4
PDE4D-207ENST00000405755 FYB1O15117 783 aa12.55□□□□□ -0.4
PDE4D-207ENST00000405755 ANKRD26Q9UPS8 1709 aa12.55□□□□□ -0.4
PDE4D-207ENST00000405755 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
PDE4D-207ENST00000405755 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
PDE4D-207ENST00000405755 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
PDE4D-207ENST00000405755 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
PDE4D-207ENST00000405755 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
PDE4D-207ENST00000405755 ZNF142P52746 1687 aaPredicted RBP12.53□□□□□ -0.4
PDE4D-207ENST00000405755 SHPRHQ149N8 1683 aa12.53□□□□□ -0.4
PDE4D-207ENST00000405755 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
PDE4D-207ENST00000405755 ADGRB2O60241 1585 aa12.53□□□□□ -0.4
PDE4D-207ENST00000405755 ANKLE2Q86XL3 938 aa12.53□□□□□ -0.4
PDE4D-207ENST00000405755 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.41
PDE4D-207ENST00000405755 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
PDE4D-207ENST00000405755 APAF1O14727 1248 aa12.51□□□□□ -0.41
PDE4D-207ENST00000405755 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
PDE4D-207ENST00000405755 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
PDE4D-207ENST00000405755 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
PDE4D-207ENST00000405755 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
PDE4D-207ENST00000405755 HSPA2P54652 639 aa12.5□□□□□ -0.41
PDE4D-207ENST00000405755 SETD1BQ9UPS6 1966 aaKnown RBP12.49□□□□□ -0.41
PDE4D-207ENST00000405755 RCAN3Q9UKA8 241 aa12.49□□□□□ -0.41
PDE4D-207ENST00000405755 XRN1Q8IZH2 1706 aaKnown RBP12.49□□□□□ -0.41
PDE4D-207ENST00000405755 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
PDE4D-207ENST00000405755 ERICH6BQ5W0A0 696 aa12.49□□□□□ -0.41
PDE4D-207ENST00000405755 MON2Q7Z3U7 1717 aa12.49□□□□□ -0.41
PDE4D-207ENST00000405755 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
PDE4D-207ENST00000405755 KCNA6P17658 529 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms