RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
SNED1-205ENST00000405547 VPS37CA5D8V6 355 aaPredicted RBP16.16■□□□□ 0.18
SNED1-205ENST00000405547 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
SNED1-205ENST00000405547 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
SNED1-205ENST00000405547 CPLX1O14810 134 aa16.16■□□□□ 0.18
SNED1-205ENST00000405547 CCDC173Q0VFZ6 552 aa16.16■□□□□ 0.18
SNED1-205ENST00000405547 NAT10Q9H0A0 1025 aaKnown RBP16.16■□□□□ 0.18
SNED1-205ENST00000405547 NUTM2FA1L443 756 aa16.15■□□□□ 0.18
SNED1-205ENST00000405547 ARGLU1Q9NWB6 273 aaPredicted RBP16.15■□□□□ 0.18
SNED1-205ENST00000405547 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
SNED1-205ENST00000405547 KIAA1107Q9UPP5 1409 aa16.15■□□□□ 0.18
SNED1-205ENST00000405547 RABEP1Q15276 862 aa16.15■□□□□ 0.18
SNED1-205ENST00000405547 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
SNED1-205ENST00000405547 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNED1-205ENST00000405547 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
SNED1-205ENST00000405547 CT47B1P0C2W7 299 aaPredicted RBP16.14■□□□□ 0.17
SNED1-205ENST00000405547 CCDC73Q6ZRK6 1079 aa16.14■□□□□ 0.17
SNED1-205ENST00000405547 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
SNED1-205ENST00000405547 TRDNQ13061 729 aa16.13■□□□□ 0.17
SNED1-205ENST00000405547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNED1-205ENST00000405547 MTHFSP49914 203 aa16.13■□□□□ 0.17
SNED1-205ENST00000405547 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
SNED1-205ENST00000405547 CAVIN1Q6NZI2 390 aaKnown RBP16.13■□□□□ 0.17
SNED1-205ENST00000405547 ARHGAP5Q13017 1502 aa16.13■□□□□ 0.17
SNED1-205ENST00000405547 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
SNED1-205ENST00000405547 BRPF3Q9ULD4 1205 aa16.13■□□□□ 0.17
SNED1-205ENST00000405547 R3HCC1Q9Y3T6 440 aaKnown RBP16.13■□□□□ 0.17
SNED1-205ENST00000405547 PDCP20941 246 aa16.12■□□□□ 0.17
SNED1-205ENST00000405547 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNED1-205ENST00000405547 EIF2S2P20042 333 aaKnown RBP16.12■□□□□ 0.17
SNED1-205ENST00000405547 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
SNED1-205ENST00000405547 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
SNED1-205ENST00000405547 PSMA5P28066 241 aa16.11■□□□□ 0.17
SNED1-205ENST00000405547 MARCH6O60337 910 aa16.11■□□□□ 0.17
SNED1-205ENST00000405547 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
SNED1-205ENST00000405547 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
SNED1-205ENST00000405547 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
SNED1-205ENST00000405547 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
SNED1-205ENST00000405547 CCDC47Q96A33 483 aaKnown RBP16.09■□□□□ 0.17
SNED1-205ENST00000405547 ACBD3Q9H3P7 528 aa16.09■□□□□ 0.17
SNED1-205ENST00000405547 CCDC9Q9Y3X0 531 aaKnown RBP16.09■□□□□ 0.17
SNED1-205ENST00000405547 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.17
SNED1-205ENST00000405547 HMOX1P09601 288 aa16.08■□□□□ 0.16
SNED1-205ENST00000405547 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
SNED1-205ENST00000405547 TSPY26PQ9H489 355 aa16.08■□□□□ 0.16
SNED1-205ENST00000405547 WDR63Q8IWG1 891 aa16.08■□□□□ 0.16
SNED1-205ENST00000405547 GNAI3P08754 354 aa16.07■□□□□ 0.16
SNED1-205ENST00000405547 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
SNED1-205ENST00000405547 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
SNED1-205ENST00000405547 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
SNED1-205ENST00000405547 IL27Q8NEV9 243 aa16.07■□□□□ 0.16
SNED1-205ENST00000405547 NEK4P51957 841 aa16.06■□□□□ 0.16
SNED1-205ENST00000405547 NOM1Q5C9Z4 860 aaKnown RBP16.06■□□□□ 0.16
SNED1-205ENST00000405547 RNF214Q8ND24 703 aa16.06■□□□□ 0.16
SNED1-205ENST00000405547 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
SNED1-205ENST00000405547 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
SNED1-205ENST00000405547 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
SNED1-205ENST00000405547 NCAPD3P42695 1498 aa16.06■□□□□ 0.16
SNED1-205ENST00000405547 APPP05067 770 aa16.06■□□□□ 0.16
SNED1-205ENST00000405547 SAFBQ15424 915 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNED1-205ENST00000405547 PTPN23Q9H3S7 1636 aa16.05■□□□□ 0.16
SNED1-205ENST00000405547 HSP90B2PQ58FF3 399 aa16.05■□□□□ 0.16
SNED1-205ENST00000405547 SDF4Q9BRK5 362 aa16.05■□□□□ 0.16
SNED1-205ENST00000405547 GRPEL1Q9HAV7 217 aa16.05■□□□□ 0.16
SNED1-205ENST00000405547 HIP1O00291 1037 aa16.05■□□□□ 0.16
SNED1-205ENST00000405547 PRPF40AO75400 957 aaKnown RBP16.04■□□□□ 0.16
SNED1-205ENST00000405547 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
SNED1-205ENST00000405547 CLASRPQ8N2M8 674 aaKnown RBP16.04■□□□□ 0.16
SNED1-205ENST00000405547 TRIM5Q9C035 493 aa16.04■□□□□ 0.16
SNED1-205ENST00000405547 ERBINQ96RT1 1412 aa16.04■□□□□ 0.16
SNED1-205ENST00000405547 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
SNED1-205ENST00000405547 K7ELQ4 463 aaPredicted RBP16.04■□□□□ 0.16
SNED1-205ENST00000405547 PCMTD1Q96MG8 357 aaPredicted RBP16.04■□□□□ 0.16
SNED1-205ENST00000405547 RALYLQ86SE5 291 aaKnown RBP16.03■□□□□ 0.16
SNED1-205ENST00000405547 GGNBP2Q9H3C7 697 aa16.03■□□□□ 0.16
SNED1-205ENST00000405547 ERICH2A1L162 156 aa16.03■□□□□ 0.16
SNED1-205ENST00000405547 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
SNED1-205ENST00000405547 DHX8Q14562 1220 aaKnown RBP16.03■□□□□ 0.16
SNED1-205ENST00000405547 BCAR3O75815 825 aa16.03■□□□□ 0.16
SNED1-205ENST00000405547 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
SNED1-205ENST00000405547 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
SNED1-205ENST00000405547 CCDC30Q5VVM6 783 aa16.02■□□□□ 0.16
SNED1-205ENST00000405547 AK7Q96M32 723 aa16.02■□□□□ 0.16
SNED1-205ENST00000405547 GRIN2BQ13224 1484 aa16.02■□□□□ 0.16
SNED1-205ENST00000405547 CCDC66A2RUB6 948 aa16.02■□□□□ 0.16
SNED1-205ENST00000405547 CCP110O43303 1012 aa16.02■□□□□ 0.16
SNED1-205ENST00000405547 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.15
SNED1-205ENST00000405547 ATF7IPQ6VMQ6 1270 aa16.02■□□□□ 0.15
SNED1-205ENST00000405547 CUL7Q14999 1698 aa16.02■□□□□ 0.15
SNED1-205ENST00000405547 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.15
SNED1-205ENST00000405547 RUFY1Q96T51 708 aa16.01■□□□□ 0.15
SNED1-205ENST00000405547 NFXL1Q6ZNB6 911 aa16.01■□□□□ 0.15
SNED1-205ENST00000405547 MCM4P33991 863 aa16.01■□□□□ 0.15
SNED1-205ENST00000405547 CWC15Q9P013 229 aaKnown RBP16.01■□□□□ 0.15
SNED1-205ENST00000405547 G3V3G9 751 aa16.01■□□□□ 0.15
SNED1-205ENST00000405547 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
SNED1-205ENST00000405547 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
SNED1-205ENST00000405547 MAP3K1Q13233 1512 aa16.01■□□□□ 0.15
SNED1-205ENST00000405547 GNAI2P04899 355 aa16■□□□□ 0.15
SNED1-205ENST00000405547 VPS53Q5VIR6 699 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms