RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
CLIP4-203ENST00000401617 KNDC1Q76NI1 1749 aa16.46■□□□□ 0.23
CLIP4-203ENST00000401617 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
CLIP4-203ENST00000401617 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
CLIP4-203ENST00000401617 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
CLIP4-203ENST00000401617 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
CLIP4-203ENST00000401617 POGKQ9P215 609 aa16.44■□□□□ 0.22
CLIP4-203ENST00000401617 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.22
CLIP4-203ENST00000401617 TECPR2O15040 1411 aa16.43■□□□□ 0.22
CLIP4-203ENST00000401617 SIRT1Q96EB6 747 aa16.43■□□□□ 0.22
CLIP4-203ENST00000401617 NSD2O96028 1365 aa16.42■□□□□ 0.22
CLIP4-203ENST00000401617 METP08581 1390 aa16.42■□□□□ 0.22
CLIP4-203ENST00000401617 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
CLIP4-203ENST00000401617 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
CLIP4-203ENST00000401617 CGNL1Q0VF96 1302 aa16.4■□□□□ 0.22
CLIP4-203ENST00000401617 PDE3BQ13370 1112 aa16.4■□□□□ 0.22
CLIP4-203ENST00000401617 ERICH6BQ5W0A0 696 aa16.4■□□□□ 0.22
CLIP4-203ENST00000401617 FAM135BQ49AJ0 1406 aa16.4■□□□□ 0.22
CLIP4-203ENST00000401617 SLIT1O75093 1534 aa16.4■□□□□ 0.22
CLIP4-203ENST00000401617 CD163L1Q9NR16 1453 aa16.4■□□□□ 0.22
CLIP4-203ENST00000401617 ARHGAP23Q9P227 1491 aa16.4■□□□□ 0.22
CLIP4-203ENST00000401617 CEBPAP49715 358 aaPredicted RBP16.4■□□□□ 0.22
CLIP4-203ENST00000401617 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
CLIP4-203ENST00000401617 CPS1P31327 1500 aa16.39■□□□□ 0.21
CLIP4-203ENST00000401617 RNF123Q5XPI4 1314 aa16.39■□□□□ 0.21
CLIP4-203ENST00000401617 ADAMTS13Q76LX8 1427 aa16.39■□□□□ 0.21
CLIP4-203ENST00000401617 SRPK2P78362 688 aaKnown RBP16.39■□□□□ 0.21
CLIP4-203ENST00000401617 PLEKHG1Q9ULL1 1385 aa16.39■□□□□ 0.21
CLIP4-203ENST00000401617 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
CLIP4-203ENST00000401617 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
CLIP4-203ENST00000401617 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
CLIP4-203ENST00000401617 MED14O60244 1454 aa16.38■□□□□ 0.21
CLIP4-203ENST00000401617 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLIP4-203ENST00000401617 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
CLIP4-203ENST00000401617 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
CLIP4-203ENST00000401617 ANKRD26Q9UPS8 1709 aa16.37■□□□□ 0.21
CLIP4-203ENST00000401617 LTKP29376 864 aa16.36■□□□□ 0.21
CLIP4-203ENST00000401617 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
CLIP4-203ENST00000401617 SENP3-EIF4A1A0A087X0R7 540 aa16.35■□□□□ 0.21
CLIP4-203ENST00000401617 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
CLIP4-203ENST00000401617 BCANQ96GW7 911 aa16.34■□□□□ 0.21
CLIP4-203ENST00000401617 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
CLIP4-203ENST00000401617 ATP7BP35670 1465 aa16.33■□□□□ 0.2
CLIP4-203ENST00000401617 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
CLIP4-203ENST00000401617 WASLO00401 505 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-203ENST00000401617 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
CLIP4-203ENST00000401617 ZNF521Q96K83 1311 aa16.31■□□□□ 0.2
CLIP4-203ENST00000401617 ADGRB2O60241 1585 aa16.31■□□□□ 0.2
CLIP4-203ENST00000401617 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
CLIP4-203ENST00000401617 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
CLIP4-203ENST00000401617 HDGFL2Q7Z4V5 671 aaPredicted RBP16.3■□□□□ 0.2
CLIP4-203ENST00000401617 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
CLIP4-203ENST00000401617 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
CLIP4-203ENST00000401617 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
CLIP4-203ENST00000401617 RIMS1Q86UR5 1692 aaKnown RBP16.29■□□□□ 0.2
CLIP4-203ENST00000401617 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
CLIP4-203ENST00000401617 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
CLIP4-203ENST00000401617 IRX6P78412 446 aaPredicted RBP16.29■□□□□ 0.2
CLIP4-203ENST00000401617 FYB1O15117 783 aa16.28■□□□□ 0.2
CLIP4-203ENST00000401617 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
CLIP4-203ENST00000401617 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
CLIP4-203ENST00000401617 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
CLIP4-203ENST00000401617 CDCA7LQ96GN5 454 aa16.28■□□□□ 0.2
CLIP4-203ENST00000401617 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
CLIP4-203ENST00000401617 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
CLIP4-203ENST00000401617 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
CLIP4-203ENST00000401617 MTHFSP49914 203 aa16.27■□□□□ 0.2
CLIP4-203ENST00000401617 CEP170BQ9Y4F5 1589 aaPredicted RBP16.27■□□□□ 0.2
CLIP4-203ENST00000401617 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
CLIP4-203ENST00000401617 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
CLIP4-203ENST00000401617 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
CLIP4-203ENST00000401617 AKAP12Q02952 1782 aa16.25■□□□□ 0.19
CLIP4-203ENST00000401617 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
CLIP4-203ENST00000401617 CDC42BPGQ6DT37 1551 aa16.25■□□□□ 0.19
CLIP4-203ENST00000401617 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
CLIP4-203ENST00000401617 PPIP5K1Q6PFW1 1433 aa16.24■□□□□ 0.19
CLIP4-203ENST00000401617 NUDT16Q96DE0 195 aaKnown RBP16.24■□□□□ 0.19
CLIP4-203ENST00000401617 CFAP53Q96M91 514 aa16.24■□□□□ 0.19
CLIP4-203ENST00000401617 GGNBP2Q9H3C7 697 aa16.24■□□□□ 0.19
CLIP4-203ENST00000401617 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
CLIP4-203ENST00000401617 PTCH1Q13635 1447 aa16.23■□□□□ 0.19
CLIP4-203ENST00000401617 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
CLIP4-203ENST00000401617 EDC4Q6P2E9 1401 aaKnown RBP16.23■□□□□ 0.19
CLIP4-203ENST00000401617 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
CLIP4-203ENST00000401617 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
CLIP4-203ENST00000401617 TOPAZ1Q8N9V7 1692 aa16.22■□□□□ 0.19
CLIP4-203ENST00000401617 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
CLIP4-203ENST00000401617 APAF1O14727 1248 aa16.22■□□□□ 0.19
CLIP4-203ENST00000401617 SLC26A8Q96RN1 970 aa16.22■□□□□ 0.19
CLIP4-203ENST00000401617 TRMT2AQ8IZ69 625 aaKnown RBP16.21■□□□□ 0.19
CLIP4-203ENST00000401617 ITSN1Q15811 1721 aa16.21■□□□□ 0.19
CLIP4-203ENST00000401617 PRR36Q9H6K5 1346 aa16.21■□□□□ 0.18
CLIP4-203ENST00000401617 IQSEC2Q5JU85 1478 aa16.2■□□□□ 0.18
CLIP4-203ENST00000401617 PNPLA6Q8IY17 1366 aa16.2■□□□□ 0.18
CLIP4-203ENST00000401617 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
CLIP4-203ENST00000401617 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
CLIP4-203ENST00000401617 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
CLIP4-203ENST00000401617 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
CLIP4-203ENST00000401617 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
CLIP4-203ENST00000401617 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms