RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 DLC1Q96QB1 1528 aa21.63■■□□□ 1.05
CHRFAM7A-203ENST00000401522 KNDC1Q76NI1 1749 aa21.62■■□□□ 1.05
CHRFAM7A-203ENST00000401522 KCNA6P17658 529 aa21.62■■□□□ 1.05
CHRFAM7A-203ENST00000401522 XRN1Q8IZH2 1706 aaKnown RBP21.61■■□□□ 1.05
CHRFAM7A-203ENST00000401522 ST20-MTHFSA0A0A6YYL1 179 aa21.61■■□□□ 1.05
CHRFAM7A-203ENST00000401522 ARHGEF28Q8N1W1 1705 aaKnown RBP21.6■■□□□ 1.05
CHRFAM7A-203ENST00000401522 FAM9BQ8IZU0 186 aa21.6■■□□□ 1.05
CHRFAM7A-203ENST00000401522 CPS1P31327 1500 aa21.6■■□□□ 1.05
CHRFAM7A-203ENST00000401522 FAM135BQ49AJ0 1406 aa21.6■■□□□ 1.05
CHRFAM7A-203ENST00000401522 NWD1Q149M9 1564 aa21.59■■□□□ 1.05
CHRFAM7A-203ENST00000401522 PTCH1Q13635 1447 aa21.58■■□□□ 1.05
CHRFAM7A-203ENST00000401522 ROBO2Q9HCK4 1378 aa21.58■■□□□ 1.05
CHRFAM7A-203ENST00000401522 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
CHRFAM7A-203ENST00000401522 PRAM1Q96QH2 718 aa21.57■■□□□ 1.04
CHRFAM7A-203ENST00000401522 WAPLQ7Z5K2 1190 aa21.55■■□□□ 1.04
CHRFAM7A-203ENST00000401522 TESK2Q96S53 571 aa21.55■■□□□ 1.04
CHRFAM7A-203ENST00000401522 POGKQ9P215 609 aa21.55■■□□□ 1.04
CHRFAM7A-203ENST00000401522 SBNO2Q9Y2G9 1366 aa21.54■■□□□ 1.04
CHRFAM7A-203ENST00000401522 PLEKHH1Q9ULM0 1364 aa21.53■■□□□ 1.04
CHRFAM7A-203ENST00000401522 SLC24A1O60721 1099 aa21.53■■□□□ 1.04
CHRFAM7A-203ENST00000401522 RBM19Q9Y4C8 960 aaKnown RBP21.53■■□□□ 1.04
CHRFAM7A-203ENST00000401522 NKTRP30414 1462 aaKnown RBP21.53■■□□□ 1.04
CHRFAM7A-203ENST00000401522 STRCP1A6NGW2 1772 aa21.52■■□□□ 1.04
CHRFAM7A-203ENST00000401522 ZNF335Q9H4Z2 1342 aaPredicted RBP21.51■■□□□ 1.03
CHRFAM7A-203ENST00000401522 QRICH2Q9H0J4 1663 aa21.51■■□□□ 1.03
CHRFAM7A-203ENST00000401522 SAFB2Q14151 953 aaKnown RBP eCLIP21.51■■□□□ 1.03
CHRFAM7A-203ENST00000401522 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
CHRFAM7A-203ENST00000401522 IRX6P78412 446 aaPredicted RBP21.49■■□□□ 1.03
CHRFAM7A-203ENST00000401522 PROSER2Q86WR7 435 aaPredicted RBP21.47■■□□□ 1.03
CHRFAM7A-203ENST00000401522 ANP32EQ9BTT0 268 aa21.47■■□□□ 1.03
CHRFAM7A-203ENST00000401522 TMF1P82094 1093 aa21.46■■□□□ 1.03
CHRFAM7A-203ENST00000401522 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
CHRFAM7A-203ENST00000401522 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
CHRFAM7A-203ENST00000401522 MINK1Q8N4C8 1332 aaPredicted RBP21.45■■□□□ 1.02
CHRFAM7A-203ENST00000401522 SMG6Q86US8 1419 aaKnown RBP21.45■■□□□ 1.02
CHRFAM7A-203ENST00000401522 NCOA3Q9Y6Q9 1424 aa21.45■■□□□ 1.02
CHRFAM7A-203ENST00000401522 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
CHRFAM7A-203ENST00000401522 EVC2Q86UK5 1308 aa21.43■■□□□ 1.02
CHRFAM7A-203ENST00000401522 RBM33Q96EV2 1170 aaKnown RBP21.43■■□□□ 1.02
CHRFAM7A-203ENST00000401522 TMEM94Q12767 1356 aa21.42■■□□□ 1.02
CHRFAM7A-203ENST00000401522 DISP3Q9P2K9 1392 aa21.42■■□□□ 1.02
CHRFAM7A-203ENST00000401522 LRRC7Q96NW7 1537 aa21.42■■□□□ 1.02
CHRFAM7A-203ENST00000401522 ADGRB2O60241 1585 aa21.42■■□□□ 1.02
CHRFAM7A-203ENST00000401522 CDCA8Q53HL2 280 aa21.41■■□□□ 1.02
CHRFAM7A-203ENST00000401522 TULP4Q9NRJ4 1543 aa21.4■■□□□ 1.02
CHRFAM7A-203ENST00000401522 WASLO00401 505 aaPredicted RBP21.4■■□□□ 1.02
CHRFAM7A-203ENST00000401522 PUS7Q96PZ0 661 aaKnown RBP21.4■■□□□ 1.02
CHRFAM7A-203ENST00000401522 ADGRL3Q9HAR2 1447 aa21.4■■□□□ 1.02
CHRFAM7A-203ENST00000401522 LTBP4Q8N2S1 1624 aa21.4■■□□□ 1.02
CHRFAM7A-203ENST00000401522 CDK19Q9BWU1 502 aa21.39■■□□□ 1.01
CHRFAM7A-203ENST00000401522 NALCNQ8IZF0 1738 aa21.38■■□□□ 1.01
CHRFAM7A-203ENST00000401522 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
CHRFAM7A-203ENST00000401522 RALBP1Q15311 655 aa21.37■■□□□ 1.01
CHRFAM7A-203ENST00000401522 C14orf37Q86TY3 774 aa21.37■■□□□ 1.01
CHRFAM7A-203ENST00000401522 PNISRQ8TF01 805 aaKnown RBP21.37■■□□□ 1.01
CHRFAM7A-203ENST00000401522 XIRP1Q702N8 1843 aaKnown RBP21.36■■□□□ 1.01
CHRFAM7A-203ENST00000401522 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
CHRFAM7A-203ENST00000401522 NUDCQ9Y266 331 aa21.36■■□□□ 1.01
CHRFAM7A-203ENST00000401522 TMC1Q8TDI8 760 aa21.35■■□□□ 1.01
CHRFAM7A-203ENST00000401522 SRPK2P78362 688 aaKnown RBP21.35■■□□□ 1.01
CHRFAM7A-203ENST00000401522 CDC42BPGQ6DT37 1551 aa21.35■■□□□ 1.01
CHRFAM7A-203ENST00000401522 CABP2Q9NPB3 220 aa21.34■■□□□ 1.01
CHRFAM7A-203ENST00000401522 MYBBP1AQ9BQG0 1328 aaKnown RBP21.34■■□□□ 1.01
CHRFAM7A-203ENST00000401522 DCCP43146 1447 aa21.32■■□□□ 1
CHRFAM7A-203ENST00000401522 RNF123Q5XPI4 1314 aa21.32■■□□□ 1
CHRFAM7A-203ENST00000401522 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
CHRFAM7A-203ENST00000401522 MSH6P52701 1360 aa21.31■■□□□ 1
CHRFAM7A-203ENST00000401522 CNGB1Q14028 1251 aaPredicted RBP21.31■■□□□ 1
CHRFAM7A-203ENST00000401522 ATAD2Q6PL18 1390 aa21.3■■□□□ 1
CHRFAM7A-203ENST00000401522 FMN2Q9NZ56 1722 aa21.29■■□□□ 1
CHRFAM7A-203ENST00000401522 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
CHRFAM7A-203ENST00000401522 ATF3P18847 181 aa21.28■■□□□ 1
CHRFAM7A-203ENST00000401522 CADPS2Q86UW7 1296 aa21.28■■□□□ 1
CHRFAM7A-203ENST00000401522 ANKARQ7Z5J8 1434 aa21.28■■□□□ 1
CHRFAM7A-203ENST00000401522 PRR36Q9H6K5 1346 aa21.27■■□□□ 1
CHRFAM7A-203ENST00000401522 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
CHRFAM7A-203ENST00000401522 ATP7BP35670 1465 aa21.27■■□□□ 1
CHRFAM7A-203ENST00000401522 USP32Q8NFA0 1604 aa21.25■□□□□ 0.99
CHRFAM7A-203ENST00000401522 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
CHRFAM7A-203ENST00000401522 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
CHRFAM7A-203ENST00000401522 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
CHRFAM7A-203ENST00000401522 PARD3Q8TEW0 1356 aa21.24■□□□□ 0.99
CHRFAM7A-203ENST00000401522 MYOM1P52179 1685 aa21.23■□□□□ 0.99
CHRFAM7A-203ENST00000401522 SLC12A5Q9H2X9 1139 aa21.23■□□□□ 0.99
CHRFAM7A-203ENST00000401522 CABP1Q9NZU7 370 aa21.23■□□□□ 0.99
CHRFAM7A-203ENST00000401522 MST1RQ04912 1400 aa21.22■□□□□ 0.99
CHRFAM7A-203ENST00000401522 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
CHRFAM7A-203ENST00000401522 PPIP5K1Q6PFW1 1433 aa21.22■□□□□ 0.99
CHRFAM7A-203ENST00000401522 TOPAZ1Q8N9V7 1692 aa21.21■□□□□ 0.99
CHRFAM7A-203ENST00000401522 RGPD8O14715 1765 aaPredicted RBP21.21■□□□□ 0.99
CHRFAM7A-203ENST00000401522 PLEKHG3A1L390 1219 aa21.21■□□□□ 0.99
CHRFAM7A-203ENST00000401522 C1orf167Q5SNV9 1468 aa21.2■□□□□ 0.98
CHRFAM7A-203ENST00000401522 ITSN1Q15811 1721 aa21.2■□□□□ 0.98
CHRFAM7A-203ENST00000401522 IQSEC2Q5JU85 1478 aa21.19■□□□□ 0.98
CHRFAM7A-203ENST00000401522 SLAIN2Q9P270 581 aa21.19■□□□□ 0.98
CHRFAM7A-203ENST00000401522 PANK3Q9H999 370 aa21.17■□□□□ 0.98
CHRFAM7A-203ENST00000401522 INSRP06213 1382 aa21.17■□□□□ 0.98
CHRFAM7A-203ENST00000401522 PER1O15534 1290 aaPredicted RBP21.17■□□□□ 0.98
CHRFAM7A-203ENST00000401522 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
CHRFAM7A-203ENST00000401522 CERKQ8TCT0 537 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms