RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 DIP2AQ14689 1571 aa23.31■■□□□ 1.32
CSNK2A1-203ENST00000400217 PLEKHH1Q9ULM0 1364 aa23.31■■□□□ 1.32
CSNK2A1-203ENST00000400217 RALBP1Q15311 655 aa23.3■■□□□ 1.32
CSNK2A1-203ENST00000400217 KNSTRNQ9Y448 316 aa23.3■■□□□ 1.32
CSNK2A1-203ENST00000400217 CPS1P31327 1500 aa23.3■■□□□ 1.32
CSNK2A1-203ENST00000400217 CABP2Q9NPB3 220 aa23.3■■□□□ 1.32
CSNK2A1-203ENST00000400217 SRPK2P78362 688 aaKnown RBP23.28■■□□□ 1.32
CSNK2A1-203ENST00000400217 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
CSNK2A1-203ENST00000400217 PTPRUQ92729 1446 aa23.26■■□□□ 1.31
CSNK2A1-203ENST00000400217 CDK19Q9BWU1 502 aa23.26■■□□□ 1.31
CSNK2A1-203ENST00000400217 SLC12A5Q9H2X9 1139 aa23.26■■□□□ 1.31
CSNK2A1-203ENST00000400217 ROBO2Q9HCK4 1378 aa23.25■■□□□ 1.31
CSNK2A1-203ENST00000400217 AMOTL2Q9Y2J4 779 aa23.25■■□□□ 1.31
CSNK2A1-203ENST00000400217 ATAD2Q6PL18 1390 aa23.24■■□□□ 1.31
CSNK2A1-203ENST00000400217 PARD3Q8TEW0 1356 aa23.24■■□□□ 1.31
CSNK2A1-203ENST00000400217 PIK3R4Q99570 1358 aa23.24■■□□□ 1.31
CSNK2A1-203ENST00000400217 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
CSNK2A1-203ENST00000400217 CC2D1BQ5T0F9 858 aaKnown RBP23.24■■□□□ 1.31
CSNK2A1-203ENST00000400217 NINLQ9Y2I6 1382 aa23.23■■□□□ 1.31
CSNK2A1-203ENST00000400217 KDM4FA0A1W2PPD8 638 aa23.23■■□□□ 1.31
CSNK2A1-203ENST00000400217 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
CSNK2A1-203ENST00000400217 AMER1Q5JTC6 1135 aaPredicted RBP23.23■■□□□ 1.31
CSNK2A1-203ENST00000400217 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
CSNK2A1-203ENST00000400217 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
CSNK2A1-203ENST00000400217 CARD14Q9BXL6 1004 aa23.22■■□□□ 1.31
CSNK2A1-203ENST00000400217 NPC1L1Q9UHC9 1359 aa23.21■■□□□ 1.31
CSNK2A1-203ENST00000400217 WASLO00401 505 aaPredicted RBP23.2■■□□□ 1.3
CSNK2A1-203ENST00000400217 NPHP4O75161 1426 aaPredicted RBP23.18■■□□□ 1.3
CSNK2A1-203ENST00000400217 PTCH1Q13635 1447 aa23.18■■□□□ 1.3
CSNK2A1-203ENST00000400217 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
CSNK2A1-203ENST00000400217 NCKAP5LQ9HCH0 1330 aa23.16■■□□□ 1.3
CSNK2A1-203ENST00000400217 XRN1Q8IZH2 1706 aaKnown RBP23.15■■□□□ 1.3
CSNK2A1-203ENST00000400217 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
CSNK2A1-203ENST00000400217 NSD3Q9BZ95 1437 aa23.14■■□□□ 1.29
CSNK2A1-203ENST00000400217 NLRP13Q86W25 1043 aa23.14■■□□□ 1.29
CSNK2A1-203ENST00000400217 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
CSNK2A1-203ENST00000400217 TERF2IPQ9NYB0 399 aa23.13■■□□□ 1.29
CSNK2A1-203ENST00000400217 KCNA6P17658 529 aa23.12■■□□□ 1.29
CSNK2A1-203ENST00000400217 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
CSNK2A1-203ENST00000400217 CABP1Q9NZU7 370 aa23.11■■□□□ 1.29
CSNK2A1-203ENST00000400217 CHD2O14647 1828 aaKnown RBP23.11■■□□□ 1.29
CSNK2A1-203ENST00000400217 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
CSNK2A1-203ENST00000400217 HDGFL2Q7Z4V5 671 aaPredicted RBP23.1■■□□□ 1.29
CSNK2A1-203ENST00000400217 NUDT16Q96DE0 195 aaKnown RBP23.1■■□□□ 1.29
CSNK2A1-203ENST00000400217 CGNL1Q0VF96 1302 aa23.09■■□□□ 1.29
CSNK2A1-203ENST00000400217 FAM9BQ8IZU0 186 aa23.09■■□□□ 1.29
CSNK2A1-203ENST00000400217 USP32Q8NFA0 1604 aa23.08■■□□□ 1.29
CSNK2A1-203ENST00000400217 CD163L1Q9NR16 1453 aa23.07■■□□□ 1.28
CSNK2A1-203ENST00000400217 CCDC61Q9Y6R9 512 aa23.07■■□□□ 1.28
CSNK2A1-203ENST00000400217 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
CSNK2A1-203ENST00000400217 PNISRQ8TF01 805 aaKnown RBP23.05■■□□□ 1.28
CSNK2A1-203ENST00000400217 ATP7BP35670 1465 aa23.05■■□□□ 1.28
CSNK2A1-203ENST00000400217 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
CSNK2A1-203ENST00000400217 PRR36Q9H6K5 1346 aa23.03■■□□□ 1.28
CSNK2A1-203ENST00000400217 NSD2O96028 1365 aa23.03■■□□□ 1.28
CSNK2A1-203ENST00000400217 HSPA2P54652 639 aa23.02■■□□□ 1.28
CSNK2A1-203ENST00000400217 MORC1Q86VD1 984 aa23.02■■□□□ 1.28
CSNK2A1-203ENST00000400217 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
CSNK2A1-203ENST00000400217 LMTK3Q96Q04 1460 aa22.99■■□□□ 1.27
CSNK2A1-203ENST00000400217 HNRNPUQ00839 825 aaKnown RBP eCLIP22.98■■□□□ 1.27
CSNK2A1-203ENST00000400217 CDC42BPGQ6DT37 1551 aa22.97■■□□□ 1.27
CSNK2A1-203ENST00000400217 PLEKHG3A1L390 1219 aa22.97■■□□□ 1.27
CSNK2A1-203ENST00000400217 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
CSNK2A1-203ENST00000400217 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
CSNK2A1-203ENST00000400217 NUTM2FA1L443 756 aa22.96■■□□□ 1.27
CSNK2A1-203ENST00000400217 FYB1O15117 783 aa22.96■■□□□ 1.27
CSNK2A1-203ENST00000400217 TOPAZ1Q8N9V7 1692 aa22.95■■□□□ 1.26
CSNK2A1-203ENST00000400217 EDC4Q6P2E9 1401 aaKnown RBP22.94■■□□□ 1.26
CSNK2A1-203ENST00000400217 GGNBP2Q9H3C7 697 aa22.93■■□□□ 1.26
CSNK2A1-203ENST00000400217 ANKARQ7Z5J8 1434 aa22.92■■□□□ 1.26
CSNK2A1-203ENST00000400217 TNNT2P45379 298 aaPredicted RBP22.92■■□□□ 1.26
CSNK2A1-203ENST00000400217 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 NALCNQ8IZF0 1738 aa22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 ADGRL3Q9HAR2 1447 aa22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 ACEP12821 1306 aa22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 PROSER2Q86WR7 435 aaPredicted RBP22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 RBM33Q96EV2 1170 aaKnown RBP22.91■■□□□ 1.26
CSNK2A1-203ENST00000400217 MON2Q7Z3U7 1717 aa22.9■■□□□ 1.26
CSNK2A1-203ENST00000400217 FMN2Q9NZ56 1722 aa22.9■■□□□ 1.26
CSNK2A1-203ENST00000400217 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.26
CSNK2A1-203ENST00000400217 KIF20BQ96Q89 1820 aa22.89■■□□□ 1.25
CSNK2A1-203ENST00000400217 ANKRD26Q9UPS8 1709 aa22.89■■□□□ 1.25
CSNK2A1-203ENST00000400217 C14orf37Q86TY3 774 aa22.87■■□□□ 1.25
CSNK2A1-203ENST00000400217 STRCQ7RTU9 1775 aa22.87■■□□□ 1.25
CSNK2A1-203ENST00000400217 POLR3AO14802 1390 aaPredicted RBP22.87■■□□□ 1.25
CSNK2A1-203ENST00000400217 INSRP06213 1382 aa22.87■■□□□ 1.25
CSNK2A1-203ENST00000400217 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
CSNK2A1-203ENST00000400217 PMFBP1Q8TBY8 1022 aa22.85■■□□□ 1.25
CSNK2A1-203ENST00000400217 WDR43Q15061 677 aaKnown RBP eCLIP22.85■■□□□ 1.25
CSNK2A1-203ENST00000400217 MTHFSP49914 203 aa22.84■■□□□ 1.25
CSNK2A1-203ENST00000400217 NGDNQ8NEJ9 315 aaKnown RBP22.84■■□□□ 1.25
CSNK2A1-203ENST00000400217 ZBED9Q6R2W3 1325 aa22.83■■□□□ 1.25
CSNK2A1-203ENST00000400217 TTC21BQ7Z4L5 1316 aa22.83■■□□□ 1.25
CSNK2A1-203ENST00000400217 USP6P35125 1406 aa22.83■■□□□ 1.25
CSNK2A1-203ENST00000400217 NME9Q86XW9 330 aa22.83■■□□□ 1.25
CSNK2A1-203ENST00000400217 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
CSNK2A1-203ENST00000400217 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
CSNK2A1-203ENST00000400217 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms