RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 SUPT6HQ7KZ85 1726 aaKnown RBP10.76□□□□□ -0.69
RETREG1-202ENST00000399793 ANKRD7Q92527 254 aa10.76□□□□□ -0.69
RETREG1-202ENST00000399793 MCTP1Q6DN14 999 aa10.75□□□□□ -0.69
RETREG1-202ENST00000399793 RALGAPBQ86X10 1494 aa10.75□□□□□ -0.69
RETREG1-202ENST00000399793 NINLQ9Y2I6 1382 aa10.75□□□□□ -0.69
RETREG1-202ENST00000399793 TULP2O00295 520 aa10.75□□□□□ -0.69
RETREG1-202ENST00000399793 PIBF1Q8WXW3 757 aa10.75□□□□□ -0.69
RETREG1-202ENST00000399793 RBM27Q9P2N5 1060 aaKnown RBP10.75□□□□□ -0.69
RETREG1-202ENST00000399793 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
RETREG1-202ENST00000399793 LMBRD1Q9NUN5 540 aa10.74□□□□□ -0.69
RETREG1-202ENST00000399793 ARHGAP31Q2M1Z3 1444 aa10.74□□□□□ -0.69
RETREG1-202ENST00000399793 CD2BP2O95400 341 aaKnown RBP10.74□□□□□ -0.69
RETREG1-202ENST00000399793 TCOF1Q13428 1488 aaKnown RBP10.74□□□□□ -0.69
RETREG1-202ENST00000399793 C17orf53Q8N3J3 647 aaPredicted RBP10.73□□□□□ -0.69
RETREG1-202ENST00000399793 MPNDQ8N594 471 aa10.73□□□□□ -0.69
RETREG1-202ENST00000399793 CHMP4CQ96CF2 233 aa10.73□□□□□ -0.69
RETREG1-202ENST00000399793 LRSAM1Q6UWE0 723 aa10.73□□□□□ -0.69
RETREG1-202ENST00000399793 RNF214Q8ND24 703 aa10.73□□□□□ -0.69
RETREG1-202ENST00000399793 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
RETREG1-202ENST00000399793 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
RETREG1-202ENST00000399793 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
RETREG1-202ENST00000399793 LRRIQ1Q96JM4 1722 aa10.73□□□□□ -0.69
RETREG1-202ENST00000399793 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
RETREG1-202ENST00000399793 MMP14P50281 582 aa10.72□□□□□ -0.69
RETREG1-202ENST00000399793 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
RETREG1-202ENST00000399793 SNAPC4Q5SXM2 1469 aa10.72□□□□□ -0.69
RETREG1-202ENST00000399793 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
RETREG1-202ENST00000399793 NGEFQ8N5V2 710 aa10.72□□□□□ -0.69
RETREG1-202ENST00000399793 UGGT2Q9NYU1 1516 aa10.72□□□□□ -0.69
RETREG1-202ENST00000399793 SYCE3A1L190 88 aa10.71□□□□□ -0.69
RETREG1-202ENST00000399793 K7ELQ4 463 aaPredicted RBP10.71□□□□□ -0.69
RETREG1-202ENST00000399793 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
RETREG1-202ENST00000399793 TERF2Q15554 542 aa10.71□□□□□ -0.69
RETREG1-202ENST00000399793 UHRF1BP1Q6BDS2 1440 aa10.71□□□□□ -0.69
RETREG1-202ENST00000399793 KIAA1107Q9UPP5 1409 aa10.71□□□□□ -0.69
RETREG1-202ENST00000399793 SOX12O15370 315 aa10.71□□□□□ -0.69
RETREG1-202ENST00000399793 SLC52A1Q9NWF4 448 aa10.71□□□□□ -0.69
RETREG1-202ENST00000399793 CALCOCO1Q9P1Z2 691 aa10.71□□□□□ -0.69
RETREG1-202ENST00000399793 GPT2Q8TD30 523 aa10.71□□□□□ -0.7
RETREG1-202ENST00000399793 HDAC5Q9UQL6 1122 aa10.71□□□□□ -0.7
RETREG1-202ENST00000399793 PRDM2Q13029 1718 aa10.71□□□□□ -0.7
RETREG1-202ENST00000399793 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
RETREG1-202ENST00000399793 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
RETREG1-202ENST00000399793 KIF2CQ99661 725 aa10.7□□□□□ -0.7
RETREG1-202ENST00000399793 CTNNA3Q9UI47 895 aa10.7□□□□□ -0.7
RETREG1-202ENST00000399793 ANKRD30AQ9BXX3 1397 aa10.7□□□□□ -0.7
RETREG1-202ENST00000399793 CCDC146Q8IYE0 955 aa10.7□□□□□ -0.7
RETREG1-202ENST00000399793 TRERF1Q96PN7 1200 aa10.7□□□□□ -0.7
RETREG1-202ENST00000399793 ERICH4A6NGS2 130 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 CTIFO43310 598 aaKnown RBP10.69□□□□□ -0.7
RETREG1-202ENST00000399793 PRPF40AO75400 957 aaKnown RBP10.69□□□□□ -0.7
RETREG1-202ENST00000399793 TSPYL1Q9H0U9 437 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 SPTLC3Q9NUV7 552 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 TMEM63CQ9P1W3 806 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 PSEN1P49768 467 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 TTC12Q9H892 705 aaPredicted RBP10.69□□□□□ -0.7
RETREG1-202ENST00000399793 DIAPH3Q9NSV4 1193 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 DDX41Q9UJV9 622 aaKnown RBP10.69□□□□□ -0.7
RETREG1-202ENST00000399793 TNNQ9UQP3 1299 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 EHBP1L1Q8N3D4 1523 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 CAMSAP2Q08AD1 1489 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 RLBP1P12271 317 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 DMRT2Q9Y5R5 561 aa10.69□□□□□ -0.7
RETREG1-202ENST00000399793 YY1AP1Q9H869 796 aa10.68□□□□□ -0.7
RETREG1-202ENST00000399793 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
RETREG1-202ENST00000399793 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
RETREG1-202ENST00000399793 FEZ2Q9UHY8 353 aaPredicted RBP10.68□□□□□ -0.7
RETREG1-202ENST00000399793 KCNG1Q9UIX4 513 aa10.68□□□□□ -0.7
RETREG1-202ENST00000399793 APAF1O14727 1248 aa10.67□□□□□ -0.7
RETREG1-202ENST00000399793 GEMIN8Q9NWZ8 242 aaKnown RBP10.67□□□□□ -0.7
RETREG1-202ENST00000399793 KDM2AQ9Y2K7 1162 aa10.67□□□□□ -0.7
RETREG1-202ENST00000399793 MORC2Q9Y6X9 1032 aaPredicted RBP10.67□□□□□ -0.7
RETREG1-202ENST00000399793 CHAF1AQ13111 956 aaPredicted RBP10.67□□□□□ -0.7
RETREG1-202ENST00000399793 PZPP20742 1482 aa10.67□□□□□ -0.7
RETREG1-202ENST00000399793 ATAD2BQ9ULI0 1458 aa10.67□□□□□ -0.7
RETREG1-202ENST00000399793 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
RETREG1-202ENST00000399793 NCBP1Q09161 790 aaKnown RBP10.67□□□□□ -0.7
RETREG1-202ENST00000399793 NPC1L1Q9UHC9 1359 aa10.66□□□□□ -0.7
RETREG1-202ENST00000399793 PPP2R1AP30153 589 aa10.66□□□□□ -0.7
RETREG1-202ENST00000399793 NSFL1CQ9UNZ2 370 aaKnown RBP10.66□□□□□ -0.7
RETREG1-202ENST00000399793 KIF16BQ96L93 1317 aa10.66□□□□□ -0.7
RETREG1-202ENST00000399793 FAM135AQ9P2D6 1515 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 CLGNO14967 610 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 NUCB2P80303 420 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 PKP1Q13835 747 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 EFCC1Q9HA90 598 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 UNC13AQ9UPW8 1703 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 APPP05067 770 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 CYP2E1P05181 493 aaPredicted RBP10.65□□□□□ -0.7
RETREG1-202ENST00000399793 MLECQ14165 292 aa10.65□□□□□ -0.7
RETREG1-202ENST00000399793 TNNT3P45378 269 aaPredicted RBP10.64□□□□□ -0.71
RETREG1-202ENST00000399793 TSPY26PQ9H489 355 aa10.64□□□□□ -0.71
RETREG1-202ENST00000399793 SHROOM2Q13796 1616 aa10.64□□□□□ -0.71
RETREG1-202ENST00000399793 LOC102724159A0A0B4J2E5 919 aa10.64□□□□□ -0.71
RETREG1-202ENST00000399793 PWP2Q15269 919 aaKnown RBP10.64□□□□□ -0.71
RETREG1-202ENST00000399793 MAGI3Q5TCQ9 1506 aa10.64□□□□□ -0.71
RETREG1-202ENST00000399793 ROCK1Q13464 1354 aa10.63□□□□□ -0.71
RETREG1-202ENST00000399793 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
RETREG1-202ENST00000399793 KIF18AQ8NI77 898 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms