RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 XBP1P17861 261 aa10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 GBP3Q9H0R5 595 aa10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 HOMEZQ8IX15 550 aa10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 CEP112Q8N8E3 955 aa10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 PABPN1LA6NDY0 278 aaKnown RBP10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 DNAAF4Q8WXU2 420 aa10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 EPB41L2O43491 1005 aaKnown RBP10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 CCDC158Q5M9N0 1113 aa10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 DDX12PQ92771 950 aa10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 PPP1R12BO60237 982 aaPredicted RBP10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
CACNA1C-220ENST00000399655 ZKSCAN1P17029 563 aaPredicted RBP10.21□□□□□ -0.77
CACNA1C-220ENST00000399655 SH3BGRP55822 239 aaPredicted RBP10.21□□□□□ -0.77
CACNA1C-220ENST00000399655 CEP135Q66GS9 1140 aa10.21□□□□□ -0.77
CACNA1C-220ENST00000399655 DNAJC21Q5F1R6 531 aaKnown RBP10.21□□□□□ -0.77
CACNA1C-220ENST00000399655 MIPOL1Q8TD10 442 aa10.21□□□□□ -0.78
CACNA1C-220ENST00000399655 ERICH2A1L162 156 aa10.21□□□□□ -0.78
CACNA1C-220ENST00000399655 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.78
CACNA1C-220ENST00000399655 BICD2Q8TD16 824 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 TRDNQ13061 729 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 SH2D4BQ5SQS7 431 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 REC8O95072 547 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 STIM1Q13586 685 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 TMCO3Q6UWJ1 677 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 CEP83Q9Y592 693 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 CHMP2AO43633 222 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 TMEM132AQ24JP5 1023 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 CNGA1P29973 690 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 ANAPC4Q9UJX5 808 aa10.2□□□□□ -0.78
CACNA1C-220ENST00000399655 NEUROD2Q15784 382 aa10.19□□□□□ -0.78
CACNA1C-220ENST00000399655 ZC4H2Q9NQZ6 224 aa10.19□□□□□ -0.78
CACNA1C-220ENST00000399655 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
CACNA1C-220ENST00000399655 SKIDA1Q1XH10 827 aa10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 CRACR2AQ9BSW2 395 aa10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 CCDC9Q9Y3X0 531 aaKnown RBP10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 HOOK3Q86VS8 718 aa10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 IRX3P78415 501 aaPredicted RBP10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 TIMELESSQ9UNS1 1208 aa10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 TACC1O75410 805 aa10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 TMF1P82094 1093 aa10.18□□□□□ -0.78
CACNA1C-220ENST00000399655 ZNF853P0CG23 659 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 PDILTQ8N807 584 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 POGKQ9P215 609 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 KIF2AO00139 706 aaPredicted RBP10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 KIF5CO60282 957 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 DYNC1I1O14576 645 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 ERC2O15083 957 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 SSX2IPQ9Y2D8 614 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 TAOK3Q9H2K8 898 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 KIF5AQ12840 1032 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 CTR9Q6PD62 1173 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 WDR63Q8IWG1 891 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 RPUSD2Q8IZ73 545 aaKnown RBP10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 NCAPGQ9BPX3 1015 aa10.17□□□□□ -0.78
CACNA1C-220ENST00000399655 ATP6V1E1P36543 226 aa10.16□□□□□ -0.78
CACNA1C-220ENST00000399655 DACH1Q9UI36 760 aa10.16□□□□□ -0.78
CACNA1C-220ENST00000399655 RBM19Q9Y4C8 960 aaKnown RBP10.16□□□□□ -0.78
CACNA1C-220ENST00000399655 PPM1FP49593 454 aaPredicted RBP10.16□□□□□ -0.78
CACNA1C-220ENST00000399655 CEP120Q8N960 986 aa10.16□□□□□ -0.78
CACNA1C-220ENST00000399655 DHX16O60231 1041 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 POLE3Q9NRF9 147 aa10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 MPHOSPH10O00566 681 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 TSNARE1Q96NA8 513 aa10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 FERMT1Q9BQL6 677 aa10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 B4GALNT3Q6L9W6 998 aa10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 VIMP08670 466 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 PRPF31Q8WWY3 499 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-220ENST00000399655 MGEA5O60502 916 aa10.15□□□□□ -0.79
CACNA1C-220ENST00000399655 IMMTQ16891 758 aaKnown RBP10.15□□□□□ -0.79
CACNA1C-220ENST00000399655 PHLDB1Q86UU1 1377 aa10.15□□□□□ -0.79
CACNA1C-220ENST00000399655 CCDC160A6NGH7 325 aa10.15□□□□□ -0.79
CACNA1C-220ENST00000399655 MAP4K4O95819 1239 aaPredicted RBP10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 CDK5RAP3Q96JB5 506 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 CCDC96Q2M329 555 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 WASHC2AQ641Q2 1341 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 CCDC110Q8TBZ0 833 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 GIMAP4Q9NUV9 329 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 LRRC45Q96CN5 670 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 APBB1O00213 710 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 PPFIBP1Q86W92 1011 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 C10orf67Q8IYJ2 551 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 ANKS4BQ8N8V4 417 aa10.14□□□□□ -0.79
CACNA1C-220ENST00000399655 GTF2E1P29083 439 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 RABGAP1Q9Y3P9 1069 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 KINO60870 393 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 COMMD10Q9Y6G5 202 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 GMNNO75496 209 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 GBP7Q8N8V2 638 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 IPO4Q8TEX9 1081 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms