RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NCBP3Q53F19 620 aaKnown RBP23.38■■□□□ 1.33
HLA-DQB1-204ENST00000399084 STAG3Q9UJ98 1225 aa23.38■■□□□ 1.33
HLA-DQB1-204ENST00000399084 YTHDC2Q9H6S0 1430 aaKnown RBP23.37■■□□□ 1.33
HLA-DQB1-204ENST00000399084 FBXO31Q5XUX0 539 aaPredicted RBP23.36■■□□□ 1.33
HLA-DQB1-204ENST00000399084 SALL2Q9Y467 1007 aaPredicted RBP23.36■■□□□ 1.33
HLA-DQB1-204ENST00000399084 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
HLA-DQB1-204ENST00000399084 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
HLA-DQB1-204ENST00000399084 PTPRMP28827 1452 aa23.35■■□□□ 1.33
HLA-DQB1-204ENST00000399084 KIF13AQ9H1H9 1805 aa23.35■■□□□ 1.33
HLA-DQB1-204ENST00000399084 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
HLA-DQB1-204ENST00000399084 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
HLA-DQB1-204ENST00000399084 ALKQ9UM73 1620 aa23.35■■□□□ 1.33
HLA-DQB1-204ENST00000399084 DLC1Q96QB1 1528 aa23.34■■□□□ 1.33
HLA-DQB1-204ENST00000399084 A2ML1A8K2U0 1454 aa23.34■■□□□ 1.33
HLA-DQB1-204ENST00000399084 CFAP53Q96M91 514 aa23.33■■□□□ 1.32
HLA-DQB1-204ENST00000399084 NUTM2DQ5VT03 806 aaPredicted RBP23.32■■□□□ 1.32
HLA-DQB1-204ENST00000399084 TRMT2AQ8IZ69 625 aaKnown RBP23.31■■□□□ 1.32
HLA-DQB1-204ENST00000399084 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
HLA-DQB1-204ENST00000399084 TERF2IPQ9NYB0 399 aa23.31■■□□□ 1.32
HLA-DQB1-204ENST00000399084 PLEKHH1Q9ULM0 1364 aa23.31■■□□□ 1.32
HLA-DQB1-204ENST00000399084 DUSP27Q5VZP5 1158 aa23.3■■□□□ 1.32
HLA-DQB1-204ENST00000399084 MED14O60244 1454 aa23.29■■□□□ 1.32
HLA-DQB1-204ENST00000399084 SLFN5Q08AF3 891 aa23.29■■□□□ 1.32
HLA-DQB1-204ENST00000399084 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.29■■□□□ 1.32
HLA-DQB1-204ENST00000399084 POGKQ9P215 609 aa23.29■■□□□ 1.32
HLA-DQB1-204ENST00000399084 MYT1Q01538 1121 aa23.28■■□□□ 1.32
HLA-DQB1-204ENST00000399084 ABCC11Q96J66 1382 aa23.28■■□□□ 1.32
HLA-DQB1-204ENST00000399084 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
HLA-DQB1-204ENST00000399084 SENP3-EIF4A1A0A087X0R7 540 aa23.28■■□□□ 1.32
HLA-DQB1-204ENST00000399084 E9PSI1 815 aa23.28■■□□□ 1.32
HLA-DQB1-204ENST00000399084 SIRT1Q96EB6 747 aa23.27■■□□□ 1.32
HLA-DQB1-204ENST00000399084 FANCIQ9NVI1 1328 aa23.26■■□□□ 1.31
HLA-DQB1-204ENST00000399084 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
HLA-DQB1-204ENST00000399084 SRPK2P78362 688 aaKnown RBP23.25■■□□□ 1.31
HLA-DQB1-204ENST00000399084 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
HLA-DQB1-204ENST00000399084 STK26Q9P289 416 aa23.25■■□□□ 1.31
HLA-DQB1-204ENST00000399084 APAF1O14727 1248 aa23.25■■□□□ 1.31
HLA-DQB1-204ENST00000399084 CABP2Q9NPB3 220 aa23.25■■□□□ 1.31
HLA-DQB1-204ENST00000399084 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
HLA-DQB1-204ENST00000399084 HDGFL2Q7Z4V5 671 aaPredicted RBP23.21■■□□□ 1.31
HLA-DQB1-204ENST00000399084 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
HLA-DQB1-204ENST00000399084 SHPRHQ149N8 1683 aa23.2■■□□□ 1.3
HLA-DQB1-204ENST00000399084 MTHFSP49914 203 aa23.2■■□□□ 1.3
HLA-DQB1-204ENST00000399084 CCDC27Q2M243 656 aa23.2■■□□□ 1.3
HLA-DQB1-204ENST00000399084 EXOC6Q8TAG9 804 aa23.2■■□□□ 1.3
HLA-DQB1-204ENST00000399084 A0A1W2PP64 1363 aa23.2■■□□□ 1.3
HLA-DQB1-204ENST00000399084 CCDC146Q8IYE0 955 aa23.18■■□□□ 1.3
HLA-DQB1-204ENST00000399084 SETD1AO15047 1707 aaKnown RBP23.17■■□□□ 1.3
HLA-DQB1-204ENST00000399084 WDR63Q8IWG1 891 aa23.17■■□□□ 1.3
HLA-DQB1-204ENST00000399084 CDK19Q9BWU1 502 aa23.17■■□□□ 1.3
HLA-DQB1-204ENST00000399084 MINK1Q8N4C8 1332 aaPredicted RBP23.17■■□□□ 1.3
HLA-DQB1-204ENST00000399084 ANKRD26Q9UPS8 1709 aa23.16■■□□□ 1.3
HLA-DQB1-204ENST00000399084 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
HLA-DQB1-204ENST00000399084 TNRQ92752 1358 aa23.16■■□□□ 1.3
HLA-DQB1-204ENST00000399084 PHF23Q9BUL5 403 aaPredicted RBP23.16■■□□□ 1.3
HLA-DQB1-204ENST00000399084 ATP7BP35670 1465 aa23.15■■□□□ 1.3
HLA-DQB1-204ENST00000399084 SAFB2Q14151 953 aaKnown RBP eCLIP23.15■■□□□ 1.3
HLA-DQB1-204ENST00000399084 MLECQ14165 292 aa23.15■■□□□ 1.3
HLA-DQB1-204ENST00000399084 WWC1Q8IX03 1113 aa23.14■■□□□ 1.3
HLA-DQB1-204ENST00000399084 TECPR2O15040 1411 aa23.14■■□□□ 1.29
HLA-DQB1-204ENST00000399084 CD163L1Q9NR16 1453 aa23.13■■□□□ 1.29
HLA-DQB1-204ENST00000399084 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
HLA-DQB1-204ENST00000399084 PNNQ9H307 717 aaKnown RBP23.13■■□□□ 1.29
HLA-DQB1-204ENST00000399084 IQSEC2Q5JU85 1478 aa23.12■■□□□ 1.29
HLA-DQB1-204ENST00000399084 FYB1O15117 783 aa23.11■■□□□ 1.29
HLA-DQB1-204ENST00000399084 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
HLA-DQB1-204ENST00000399084 TNNT2P45379 298 aaPredicted RBP23.1■■□□□ 1.29
HLA-DQB1-204ENST00000399084 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
HLA-DQB1-204ENST00000399084 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
HLA-DQB1-204ENST00000399084 MS4A1P11836 297 aa23.09■■□□□ 1.29
HLA-DQB1-204ENST00000399084 TCP11L2Q8N4U5 519 aa23.09■■□□□ 1.29
HLA-DQB1-204ENST00000399084 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
HLA-DQB1-204ENST00000399084 CRBNQ96SW2 442 aa23.08■■□□□ 1.28
HLA-DQB1-204ENST00000399084 PNPLA6Q8IY17 1366 aa23.06■■□□□ 1.28
HLA-DQB1-204ENST00000399084 PLIN1O60240 522 aa23.06■■□□□ 1.28
HLA-DQB1-204ENST00000399084 AAMPQ13685 434 aa23.06■■□□□ 1.28
HLA-DQB1-204ENST00000399084 CABP1Q9NZU7 370 aa23.06■■□□□ 1.28
HLA-DQB1-204ENST00000399084 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
HLA-DQB1-204ENST00000399084 PDE3AQ14432 1141 aa23.05■■□□□ 1.28
HLA-DQB1-204ENST00000399084 CPS1P31327 1500 aa23.04■■□□□ 1.28
HLA-DQB1-204ENST00000399084 CT47B1P0C2W7 299 aaPredicted RBP23.04■■□□□ 1.28
HLA-DQB1-204ENST00000399084 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
HLA-DQB1-204ENST00000399084 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
HLA-DQB1-204ENST00000399084 UBR1Q8IWV7 1749 aa23.04■■□□□ 1.28
HLA-DQB1-204ENST00000399084 GGNBP2Q9H3C7 697 aa23.03■■□□□ 1.28
HLA-DQB1-204ENST00000399084 MYH16Q9H6N6 1097 aa23.03■■□□□ 1.28
HLA-DQB1-204ENST00000399084 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
HLA-DQB1-204ENST00000399084 KIF20BQ96Q89 1820 aa23.03■■□□□ 1.28
HLA-DQB1-204ENST00000399084 ADGRB2O60241 1585 aa23.03■■□□□ 1.28
HLA-DQB1-204ENST00000399084 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
HLA-DQB1-204ENST00000399084 METP08581 1390 aa23.02■■□□□ 1.28
HLA-DQB1-204ENST00000399084 EDC4Q6P2E9 1401 aaKnown RBP23.02■■□□□ 1.28
HLA-DQB1-204ENST00000399084 COL3A1P02461 1466 aaPredicted RBP23.02■■□□□ 1.28
HLA-DQB1-204ENST00000399084 CENPQQ7L2Z9 268 aaPredicted RBP23.01■■□□□ 1.27
HLA-DQB1-204ENST00000399084 WAPLQ7Z5K2 1190 aa23.01■■□□□ 1.27
HLA-DQB1-204ENST00000399084 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
HLA-DQB1-204ENST00000399084 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
HLA-DQB1-204ENST00000399084 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
HLA-DQB1-204ENST00000399084 CDC42BPGQ6DT37 1551 aa22.99■■□□□ 1.27
HLA-DQB1-204ENST00000399084 IL16Q14005 1332 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms