RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 AGLP35573 1532 aa33.36■■■□□ 2.93
COL13A1-203ENST00000398969 PPLO60437 1756 aa33.36■■■□□ 2.93
COL13A1-203ENST00000398969 RPGRIP1LQ68CZ1 1315 aa33.35■■■□□ 2.93
COL13A1-203ENST00000398969 SETBP1Q9Y6X0 1596 aa33.33■■■□□ 2.93
COL13A1-203ENST00000398969 E9PSI1 815 aa33.32■■■□□ 2.93
COL13A1-203ENST00000398969 NGEFQ8N5V2 710 aa33.31■■■□□ 2.92
COL13A1-203ENST00000398969 DDRGK1Q96HY6 314 aa33.31■■■□□ 2.92
COL13A1-203ENST00000398969 POLR3AO14802 1390 aaPredicted RBP33.3■■■□□ 2.92
COL13A1-203ENST00000398969 SLC52A1Q9NWF4 448 aa33.3■■■□□ 2.92
COL13A1-203ENST00000398969 CENPJQ9HC77 1338 aaPredicted RBP33.29■■■□□ 2.92
COL13A1-203ENST00000398969 IDI1Q13907 227 aa33.29■■■□□ 2.92
COL13A1-203ENST00000398969 PPP6R1Q9UPN7 881 aa33.29■■■□□ 2.92
COL13A1-203ENST00000398969 LAS1LQ9Y4W2 734 aaKnown RBP33.28■■■□□ 2.92
COL13A1-203ENST00000398969 PREX1Q8TCU6 1659 aa33.28■■■□□ 2.92
COL13A1-203ENST00000398969 DMRT2Q9Y5R5 561 aa33.27■■■□□ 2.92
COL13A1-203ENST00000398969 BCAR3O75815 825 aa33.26■■■□□ 2.91
COL13A1-203ENST00000398969 ARHGEF40Q8TER5 1519 aa33.25■■■□□ 2.91
COL13A1-203ENST00000398969 FAM161AQ3B820 660 aa33.23■■■□□ 2.91
COL13A1-203ENST00000398969 C14orf93Q9H972 538 aaKnown RBP33.23■■■□□ 2.91
COL13A1-203ENST00000398969 NSD3Q9BZ95 1437 aa33.22■■■□□ 2.91
COL13A1-203ENST00000398969 C8orf34Q49A92 452 aa33.21■■■□□ 2.91
COL13A1-203ENST00000398969 USP35Q9P2H5 1018 aa33.21■■■□□ 2.91
COL13A1-203ENST00000398969 NEXMIFQ5QGS0 1516 aa33.21■■■□□ 2.91
COL13A1-203ENST00000398969 SHPRHQ149N8 1683 aa33.21■■■□□ 2.91
COL13A1-203ENST00000398969 PPM1GO15355 546 aaPredicted RBP33.21■■■□□ 2.91
COL13A1-203ENST00000398969 QRICH2Q9H0J4 1663 aa33.2■■■□□ 2.91
COL13A1-203ENST00000398969 NEFMP07197 916 aa33.2■■■□□ 2.91
COL13A1-203ENST00000398969 FBXO31Q5XUX0 539 aaPredicted RBP33.2■■■□□ 2.91
COL13A1-203ENST00000398969 ADGRB1O14514 1584 aa33.19■■■□□ 2.9
COL13A1-203ENST00000398969 TRAK1Q9UPV9 953 aa33.19■■■□□ 2.9
COL13A1-203ENST00000398969 VGFO15240 615 aaPredicted RBP33.18■■■□□ 2.9
COL13A1-203ENST00000398969 WWC1Q8IX03 1113 aa33.17■■■□□ 2.9
COL13A1-203ENST00000398969 MORC1Q86VD1 984 aa33.16■■■□□ 2.9
COL13A1-203ENST00000398969 CLTCQ00610 1675 aaKnown RBP33.16■■■□□ 2.9
COL13A1-203ENST00000398969 NUTM2DQ5VT03 806 aaPredicted RBP33.14■■■□□ 2.9
COL13A1-203ENST00000398969 TMEM131LA2VDJ0 1609 aa33.14■■■□□ 2.9
COL13A1-203ENST00000398969 MLECQ14165 292 aa33.14■■■□□ 2.9
COL13A1-203ENST00000398969 SLC12A5Q9H2X9 1139 aa33.14■■■□□ 2.9
COL13A1-203ENST00000398969 RGS3P49796 1198 aa33.13■■■□□ 2.89
COL13A1-203ENST00000398969 PDE3AQ14432 1141 aa33.13■■■□□ 2.89
COL13A1-203ENST00000398969 NINLQ9Y2I6 1382 aa33.12■■■□□ 2.89
COL13A1-203ENST00000398969 MYO5BQ9ULV0 1848 aa33.12■■■□□ 2.89
COL13A1-203ENST00000398969 USP32Q8NFA0 1604 aa33.12■■■□□ 2.89
COL13A1-203ENST00000398969 CGNL1Q0VF96 1302 aa33.11■■■□□ 2.89
COL13A1-203ENST00000398969 ZFYVE9O95405 1425 aa33.11■■■□□ 2.89
COL13A1-203ENST00000398969 TMEM132EQ6IEE7 984 aa33.09■■■□□ 2.89
COL13A1-203ENST00000398969 IQSEC2Q5JU85 1478 aa33.09■■■□□ 2.89
COL13A1-203ENST00000398969 RUNDC1Q96C34 613 aa33.08■■■□□ 2.89
COL13A1-203ENST00000398969 TNNT2P45379 298 aaPredicted RBP33.08■■■□□ 2.89
COL13A1-203ENST00000398969 IGHDP01880 384 aa33.06■■■□□ 2.88
COL13A1-203ENST00000398969 SPATA31D1Q6ZQQ2 1576 aa33.04■■■□□ 2.88
COL13A1-203ENST00000398969 PHF23Q9BUL5 403 aaPredicted RBP33.03■■■□□ 2.88
COL13A1-203ENST00000398969 CANXP27824 592 aaKnown RBP33.02■■■□□ 2.88
COL13A1-203ENST00000398969 SLC4A3P48751 1232 aa33.02■■■□□ 2.88
COL13A1-203ENST00000398969 TCP11L2Q8N4U5 519 aa33.02■■■□□ 2.88
COL13A1-203ENST00000398969 CLUAP1Q96AJ1 413 aa33.02■■■□□ 2.88
COL13A1-203ENST00000398969 NEUROD2Q15784 382 aa33.02■■■□□ 2.88
COL13A1-203ENST00000398969 PANK1Q8TE04 598 aa33.02■■■□□ 2.88
COL13A1-203ENST00000398969 RRP7AQ9Y3A4 280 aaKnown RBP33.02■■■□□ 2.88
COL13A1-203ENST00000398969 COG6Q9Y2V7 657 aa33■■■□□ 2.87
COL13A1-203ENST00000398969 DAXXQ9UER7 740 aaPredicted RBP32.99■■■□□ 2.87
COL13A1-203ENST00000398969 MTHFSP49914 203 aa32.99■■■□□ 2.87
COL13A1-203ENST00000398969 ESF1Q9H501 851 aaKnown RBP32.98■■■□□ 2.87
COL13A1-203ENST00000398969 STAG3Q9UJ98 1225 aa32.98■■■□□ 2.87
COL13A1-203ENST00000398969 VIRMAQ69YN4 1812 aaKnown RBP32.97■■■□□ 2.87
COL13A1-203ENST00000398969 WDR63Q8IWG1 891 aa32.97■■■□□ 2.87
COL13A1-203ENST00000398969 PUS7Q96PZ0 661 aaKnown RBP32.97■■■□□ 2.87
COL13A1-203ENST00000398969 TULP4Q9NRJ4 1543 aa32.97■■■□□ 2.87
COL13A1-203ENST00000398969 RARSP54136 660 aaKnown RBP32.97■■■□□ 2.87
COL13A1-203ENST00000398969 ARHGEF28Q8N1W1 1705 aaKnown RBP32.97■■■□□ 2.87
COL13A1-203ENST00000398969 ZMYM3Q14202 1370 aa32.96■■■□□ 2.87
COL13A1-203ENST00000398969 CFAP53Q96M91 514 aa32.95■■■□□ 2.87
COL13A1-203ENST00000398969 FRAT1Q92837 279 aaPredicted RBP32.94■■■□□ 2.86
COL13A1-203ENST00000398969 EVC2Q86UK5 1308 aa32.94■■■□□ 2.86
COL13A1-203ENST00000398969 ANKRD36BQ8N2N9 1353 aa32.94■■■□□ 2.86
COL13A1-203ENST00000398969 CCDC27Q2M243 656 aa32.94■■■□□ 2.86
COL13A1-203ENST00000398969 NSD2O96028 1365 aa32.92■■■□□ 2.86
COL13A1-203ENST00000398969 MAPK8IP3Q9UPT6 1336 aa32.91■■■□□ 2.86
COL13A1-203ENST00000398969 NFKBIBQ15653 356 aa32.91■■■□□ 2.86
COL13A1-203ENST00000398969 A2ML1A8K2U0 1454 aa32.91■■■□□ 2.86
COL13A1-203ENST00000398969 SENP3Q9H4L4 574 aaPredicted RBP32.88■■■□□ 2.85
COL13A1-203ENST00000398969 AAMPQ13685 434 aa32.88■■■□□ 2.85
COL13A1-203ENST00000398969 NCBP3Q53F19 620 aaKnown RBP32.87■■■□□ 2.85
COL13A1-203ENST00000398969 RLBP1P12271 317 aa32.84■■■□□ 2.85
COL13A1-203ENST00000398969 ADGRB2O60241 1585 aa32.84■■■□□ 2.85
COL13A1-203ENST00000398969 USP19O94966 1318 aa32.84■■■□□ 2.85
COL13A1-203ENST00000398969 PMFBP1Q8TBY8 1022 aa32.83■■■□□ 2.85
COL13A1-203ENST00000398969 CABP2Q9NPB3 220 aa32.83■■■□□ 2.85
COL13A1-203ENST00000398969 TNNQ9UQP3 1299 aa32.82■■■□□ 2.85
COL13A1-203ENST00000398969 MYH16Q9H6N6 1097 aa32.82■■■□□ 2.84
COL13A1-203ENST00000398969 U2AF1L5P0DN76 240 aaPredicted RBP32.81■■■□□ 2.84
COL13A1-203ENST00000398969 U2AF1Q01081 240 aaKnown RBP eCLIP32.81■■■□□ 2.84
COL13A1-203ENST00000398969 ALKQ9UM73 1620 aa32.81■■■□□ 2.84
COL13A1-203ENST00000398969 BCL2L13Q9BXK5 485 aa32.81■■■□□ 2.84
COL13A1-203ENST00000398969 RIMS2Q9UQ26 1411 aa32.8■■■□□ 2.84
COL13A1-203ENST00000398969 STK26Q9P289 416 aa32.8■■■□□ 2.84
COL13A1-203ENST00000398969 TRHP20396 242 aaPredicted RBP32.8■■■□□ 2.84
COL13A1-203ENST00000398969 PCDHB15Q9Y5E8 787 aa32.8■■■□□ 2.84
COL13A1-203ENST00000398969 YTHDC2Q9H6S0 1430 aaKnown RBP32.77■■■□□ 2.84
COL13A1-203ENST00000398969 ABCC11Q96J66 1382 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms