RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 TMEM2Q9UHN6 1383 aa9.95□□□□□ -0.82
RGPD1-201ENST00000398193 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
RGPD1-201ENST00000398193 CGNL1Q0VF96 1302 aa9.95□□□□□ -0.82
RGPD1-201ENST00000398193 KIF20BQ96Q89 1820 aa9.94□□□□□ -0.82
RGPD1-201ENST00000398193 NCBP3Q53F19 620 aaKnown RBP9.94□□□□□ -0.82
RGPD1-201ENST00000398193 ADAMTSL3P82987 1691 aa9.94□□□□□ -0.82
RGPD1-201ENST00000398193 FBXO31Q5XUX0 539 aaPredicted RBP9.94□□□□□ -0.82
RGPD1-201ENST00000398193 CCDC184Q52MB2 194 aa9.93□□□□□ -0.82
RGPD1-201ENST00000398193 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
RGPD1-201ENST00000398193 POLR3AO14802 1390 aaPredicted RBP9.93□□□□□ -0.82
RGPD1-201ENST00000398193 NEFLP07196 543 aa9.93□□□□□ -0.82
RGPD1-201ENST00000398193 TOPAZ1Q8N9V7 1692 aa9.92□□□□□ -0.82
RGPD1-201ENST00000398193 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
RGPD1-201ENST00000398193 CDC42BPGQ6DT37 1551 aa9.92□□□□□ -0.82
RGPD1-201ENST00000398193 FAM9BQ8IZU0 186 aa9.91□□□□□ -0.82
RGPD1-201ENST00000398193 PTCH1Q13635 1447 aa9.91□□□□□ -0.82
RGPD1-201ENST00000398193 NSD3Q9BZ95 1437 aa9.91□□□□□ -0.82
RGPD1-201ENST00000398193 TRAK1Q9UPV9 953 aa9.91□□□□□ -0.82
RGPD1-201ENST00000398193 SUPT16HQ9Y5B9 1047 aaKnown RBP9.91□□□□□ -0.82
RGPD1-201ENST00000398193 SHPRHQ149N8 1683 aa9.9□□□□□ -0.82
RGPD1-201ENST00000398193 AKAP12Q02952 1782 aa9.9□□□□□ -0.82
RGPD1-201ENST00000398193 PIK3R4Q99570 1358 aa9.9□□□□□ -0.82
RGPD1-201ENST00000398193 MON2Q7Z3U7 1717 aa9.9□□□□□ -0.82
RGPD1-201ENST00000398193 CEP170BQ9Y4F5 1589 aaPredicted RBP9.9□□□□□ -0.82
RGPD1-201ENST00000398193 NUDCQ9Y266 331 aa9.9□□□□□ -0.83
RGPD1-201ENST00000398193 XRN1Q8IZH2 1706 aaKnown RBP9.89□□□□□ -0.83
RGPD1-201ENST00000398193 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
RGPD1-201ENST00000398193 ADAMTS13Q76LX8 1427 aa9.89□□□□□ -0.83
RGPD1-201ENST00000398193 ITSN1Q15811 1721 aa9.88□□□□□ -0.83
RGPD1-201ENST00000398193 CD163L1Q9NR16 1453 aa9.88□□□□□ -0.83
RGPD1-201ENST00000398193 CC2D1BQ5T0F9 858 aaKnown RBP9.88□□□□□ -0.83
RGPD1-201ENST00000398193 LRRC7Q96NW7 1537 aa9.88□□□□□ -0.83
RGPD1-201ENST00000398193 TERF2IPQ9NYB0 399 aa9.88□□□□□ -0.83
RGPD1-201ENST00000398193 TMEM132EQ6IEE7 984 aa9.87□□□□□ -0.83
RGPD1-201ENST00000398193 CARD14Q9BXL6 1004 aa9.86□□□□□ -0.83
RGPD1-201ENST00000398193 NRKQ7Z2Y5 1582 aa9.86□□□□□ -0.83
RGPD1-201ENST00000398193 POGKQ9P215 609 aa9.86□□□□□ -0.83
RGPD1-201ENST00000398193 USP54Q70EL1 1684 aa9.86□□□□□ -0.83
RGPD1-201ENST00000398193 WDR43Q15061 677 aaKnown RBP eCLIP9.85□□□□□ -0.83
RGPD1-201ENST00000398193 PRAM1Q96QH2 718 aa9.85□□□□□ -0.83
RGPD1-201ENST00000398193 EID1Q9Y6B2 187 aa9.85□□□□□ -0.83
RGPD1-201ENST00000398193 CPSF1Q10570 1443 aaKnown RBP9.85□□□□□ -0.83
RGPD1-201ENST00000398193 EDC4Q6P2E9 1401 aaKnown RBP9.85□□□□□ -0.83
RGPD1-201ENST00000398193 MLECQ14165 292 aa9.85□□□□□ -0.83
RGPD1-201ENST00000398193 HDGFL2Q7Z4V5 671 aaPredicted RBP9.85□□□□□ -0.83
RGPD1-201ENST00000398193 THEMISQ8N1K5 641 aaPredicted RBP9.84□□□□□ -0.83
RGPD1-201ENST00000398193 A0A1W2PP64 1363 aa9.84□□□□□ -0.83
RGPD1-201ENST00000398193 IQSEC2Q5JU85 1478 aa9.84□□□□□ -0.83
RGPD1-201ENST00000398193 METP08581 1390 aa9.83□□□□□ -0.84
RGPD1-201ENST00000398193 TBX22Q9Y458 520 aa9.83□□□□□ -0.84
RGPD1-201ENST00000398193 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
RGPD1-201ENST00000398193 ANKARQ7Z5J8 1434 aa9.83□□□□□ -0.84
RGPD1-201ENST00000398193 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
RGPD1-201ENST00000398193 CFAP53Q96M91 514 aa9.83□□□□□ -0.84
RGPD1-201ENST00000398193 CDK19Q9BWU1 502 aa9.82□□□□□ -0.84
RGPD1-201ENST00000398193 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.82□□□□□ -0.84
RGPD1-201ENST00000398193 NWD1Q149M9 1564 aa9.82□□□□□ -0.84
RGPD1-201ENST00000398193 WASLO00401 505 aaPredicted RBP9.81□□□□□ -0.84
RGPD1-201ENST00000398193 DNAJC5Q9H3Z4 198 aa9.81□□□□□ -0.84
RGPD1-201ENST00000398193 AATKQ6ZMQ8 1374 aa9.81□□□□□ -0.84
RGPD1-201ENST00000398193 NALCNQ8IZF0 1738 aa9.81□□□□□ -0.84
RGPD1-201ENST00000398193 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
RGPD1-201ENST00000398193 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
RGPD1-201ENST00000398193 FKBP8Q14318 412 aa9.8□□□□□ -0.84
RGPD1-201ENST00000398193 ZNF521Q96K83 1311 aa9.8□□□□□ -0.84
RGPD1-201ENST00000398193 FMN2Q9NZ56 1722 aa9.8□□□□□ -0.84
RGPD1-201ENST00000398193 SLC12A5Q9H2X9 1139 aa9.8□□□□□ -0.84
RGPD1-201ENST00000398193 PPIP5K1Q6PFW1 1433 aa9.8□□□□□ -0.84
RGPD1-201ENST00000398193 PNPLA6Q8IY17 1366 aa9.8□□□□□ -0.84
RGPD1-201ENST00000398193 ZNF692Q9BU19 519 aaPredicted RBP9.8□□□□□ -0.84
RGPD1-201ENST00000398193 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
RGPD1-201ENST00000398193 PNNQ9H307 717 aaKnown RBP9.79□□□□□ -0.84
RGPD1-201ENST00000398193 CHD2O14647 1828 aaKnown RBP9.79□□□□□ -0.84
RGPD1-201ENST00000398193 CCDC27Q2M243 656 aa9.79□□□□□ -0.84
RGPD1-201ENST00000398193 STK26Q9P289 416 aa9.79□□□□□ -0.84
RGPD1-201ENST00000398193 TRHP20396 242 aaPredicted RBP9.78□□□□□ -0.84
RGPD1-201ENST00000398193 PPP4R2Q9NY27 417 aa9.78□□□□□ -0.84
RGPD1-201ENST00000398193 PLEKHH1Q9ULM0 1364 aa9.78□□□□□ -0.84
RGPD1-201ENST00000398193 PTPRUQ92729 1446 aa9.78□□□□□ -0.84
RGPD1-201ENST00000398193 CDK12Q9NYV4 1490 aaPredicted RBP9.78□□□□□ -0.84
RGPD1-201ENST00000398193 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
RGPD1-201ENST00000398193 MINK1Q8N4C8 1332 aaPredicted RBP9.78□□□□□ -0.84
RGPD1-201ENST00000398193 ROBO2Q9HCK4 1378 aa9.77□□□□□ -0.85
RGPD1-201ENST00000398193 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
RGPD1-201ENST00000398193 TRMT2AQ8IZ69 625 aaKnown RBP9.77□□□□□ -0.85
RGPD1-201ENST00000398193 RUNDC1Q96C34 613 aa9.76□□□□□ -0.85
RGPD1-201ENST00000398193 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
RGPD1-201ENST00000398193 LTKP29376 864 aa9.75□□□□□ -0.85
RGPD1-201ENST00000398193 E9PSI1 815 aa9.74□□□□□ -0.85
RGPD1-201ENST00000398193 NKTRP30414 1462 aaKnown RBP9.74□□□□□ -0.85
RGPD1-201ENST00000398193 TTC21AQ8NDW8 1320 aa9.74□□□□□ -0.85
RGPD1-201ENST00000398193 WDR63Q8IWG1 891 aa9.74□□□□□ -0.85
RGPD1-201ENST00000398193 CCDC61Q9Y6R9 512 aa9.74□□□□□ -0.85
RGPD1-201ENST00000398193 SSH2Q76I76 1423 aa9.74□□□□□ -0.85
RGPD1-201ENST00000398193 GOLGA2Q08379 1002 aa9.74□□□□□ -0.85
RGPD1-201ENST00000398193 NUDT16Q96DE0 195 aaKnown RBP9.73□□□□□ -0.85
RGPD1-201ENST00000398193 FYB1O15117 783 aa9.73□□□□□ -0.85
RGPD1-201ENST00000398193 PHF23Q9BUL5 403 aaPredicted RBP9.73□□□□□ -0.85
RGPD1-201ENST00000398193 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
RGPD1-201ENST00000398193 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms