RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 SMC4Q9NTJ3 1288 aa15.38■□□□□ 0.05
CCBE1-201ENST00000398179 PRPF40AO75400 957 aaKnown RBP15.37■□□□□ 0.05
CCBE1-201ENST00000398179 KLHL10Q6JEL2 608 aa15.37■□□□□ 0.05
CCBE1-201ENST00000398179 ANKRD62A6NC57 917 aa15.37■□□□□ 0.05
CCBE1-201ENST00000398179 SLKQ9H2G2 1235 aaPredicted RBP15.37■□□□□ 0.05
CCBE1-201ENST00000398179 KIF3CO14782 793 aa15.36■□□□□ 0.05
CCBE1-201ENST00000398179 DYNC1I1O14576 645 aa15.36■□□□□ 0.05
CCBE1-201ENST00000398179 EFCC1Q9HA90 598 aa15.36■□□□□ 0.05
CCBE1-201ENST00000398179 LIMCH1Q9UPQ0 1083 aa15.36■□□□□ 0.05
CCBE1-201ENST00000398179 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
CCBE1-201ENST00000398179 WHAMMQ8TF30 809 aa15.35■□□□□ 0.05
CCBE1-201ENST00000398179 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
CCBE1-201ENST00000398179 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
CCBE1-201ENST00000398179 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
CCBE1-201ENST00000398179 CEP104O60308 925 aa15.34■□□□□ 0.05
CCBE1-201ENST00000398179 INF2Q27J81 1249 aa15.34■□□□□ 0.05
CCBE1-201ENST00000398179 MAP2K2P36507 400 aa15.33■□□□□ 0.05
CCBE1-201ENST00000398179 ANKRD18AQ8IVF6 992 aa15.33■□□□□ 0.04
CCBE1-201ENST00000398179 GNL2Q13823 731 aaKnown RBP15.33■□□□□ 0.04
CCBE1-201ENST00000398179 NUTM1Q86Y26 1132 aa15.33■□□□□ 0.04
CCBE1-201ENST00000398179 SPATS2LQ9NUQ6 558 aaKnown RBP15.33■□□□□ 0.04
CCBE1-201ENST00000398179 CCDC65Q8IXS2 484 aa15.33■□□□□ 0.04
CCBE1-201ENST00000398179 EXOC8Q8IYI6 725 aa15.33■□□□□ 0.04
CCBE1-201ENST00000398179 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCBE1-201ENST00000398179 SASS6Q6UVJ0 657 aa15.32■□□□□ 0.04
CCBE1-201ENST00000398179 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
CCBE1-201ENST00000398179 CT47B1P0C2W7 299 aaPredicted RBP15.32■□□□□ 0.04
CCBE1-201ENST00000398179 GBP6Q6ZN66 633 aa15.32■□□□□ 0.04
CCBE1-201ENST00000398179 PPFIBP2Q8ND30 876 aa15.32■□□□□ 0.04
CCBE1-201ENST00000398179 CCDC94Q9BW85 323 aaPredicted RBP15.32■□□□□ 0.04
CCBE1-201ENST00000398179 KIF3BO15066 747 aa15.32■□□□□ 0.04
CCBE1-201ENST00000398179 IGSF3O75054 1194 aa15.32■□□□□ 0.04
CCBE1-201ENST00000398179 STK10O94804 968 aaKnown RBP15.31■□□□□ 0.04
CCBE1-201ENST00000398179 MAP3K7CLP57077 242 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 RBM33Q96EV2 1170 aaKnown RBP15.31■□□□□ 0.04
CCBE1-201ENST00000398179 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 FAM177A1Q8N128 213 aaPredicted RBP15.31■□□□□ 0.04
CCBE1-201ENST00000398179 MPP4Q96JB8 637 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 SATB1Q01826 763 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 NUCB2P80303 420 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 BRMS1Q9HCU9 246 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 MYO15BQ96JP2 1530 aa15.31■□□□□ 0.04
CCBE1-201ENST00000398179 IVLP07476 585 aa15.3■□□□□ 0.04
CCBE1-201ENST00000398179 NBPF11Q86T75 865 aa15.3■□□□□ 0.04
CCBE1-201ENST00000398179 USP6NLQ92738 828 aa15.3■□□□□ 0.04
CCBE1-201ENST00000398179 CENPHQ9H3R5 247 aa15.3■□□□□ 0.04
CCBE1-201ENST00000398179 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
CCBE1-201ENST00000398179 UTP14CQ5TAP6 766 aaKnown RBP15.3■□□□□ 0.04
CCBE1-201ENST00000398179 NEBLO76041 1014 aa15.29■□□□□ 0.04
CCBE1-201ENST00000398179 NBPF9Q3BBW0 867 aa15.29■□□□□ 0.04
CCBE1-201ENST00000398179 MORC4Q8TE76 937 aa15.29■□□□□ 0.04
CCBE1-201ENST00000398179 NACADO15069 1562 aa15.29■□□□□ 0.04
CCBE1-201ENST00000398179 SH2D4BQ5SQS7 431 aa15.28■□□□□ 0.04
CCBE1-201ENST00000398179 ACRBPQ8NEB7 543 aa15.28■□□□□ 0.04
CCBE1-201ENST00000398179 VIMP08670 466 aaKnown RBP15.28■□□□□ 0.04
CCBE1-201ENST00000398179 PRPF38AQ8NAV1 312 aaKnown RBP15.28■□□□□ 0.04
CCBE1-201ENST00000398179 SPTY2D1Q68D10 685 aaPredicted RBP15.27■□□□□ 0.04
CCBE1-201ENST00000398179 MTMR7Q9Y216 660 aa15.27■□□□□ 0.04
CCBE1-201ENST00000398179 DHX16O60231 1041 aaKnown RBP15.27■□□□□ 0.04
CCBE1-201ENST00000398179 CCER2I3L3R5 266 aa15.27■□□□□ 0.03
CCBE1-201ENST00000398179 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.03
CCBE1-201ENST00000398179 KRI1Q8N9T8 703 aaKnown RBP15.27■□□□□ 0.03
CCBE1-201ENST00000398179 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.03
CCBE1-201ENST00000398179 ESPNB1AK53 854 aa15.27■□□□□ 0.03
CCBE1-201ENST00000398179 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCBE1-201ENST00000398179 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
CCBE1-201ENST00000398179 CLASRPQ8N2M8 674 aaKnown RBP15.26■□□□□ 0.03
CCBE1-201ENST00000398179 RRP7BPQ9NSQ0 103 aa15.26■□□□□ 0.03
CCBE1-201ENST00000398179 KIF4AO95239 1232 aa15.26■□□□□ 0.03
CCBE1-201ENST00000398179 PDCD7Q8N8D1 485 aaKnown RBP15.26■□□□□ 0.03
CCBE1-201ENST00000398179 FAM210AQ96ND0 272 aa15.26■□□□□ 0.03
CCBE1-201ENST00000398179 CHMP2AO43633 222 aa15.26■□□□□ 0.03
CCBE1-201ENST00000398179 EZRP15311 586 aaKnown RBP15.25■□□□□ 0.03
CCBE1-201ENST00000398179 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
CCBE1-201ENST00000398179 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
CCBE1-201ENST00000398179 ATP6V1E2Q96A05 226 aa15.24■□□□□ 0.03
CCBE1-201ENST00000398179 BIRC2Q13490 618 aa15.24■□□□□ 0.03
CCBE1-201ENST00000398179 CXorf38Q8TB03 319 aa15.24■□□□□ 0.03
CCBE1-201ENST00000398179 RSRC1Q96IZ7 334 aaKnown RBP15.24■□□□□ 0.03
CCBE1-201ENST00000398179 CEP83Q9Y592 693 aa15.24■□□□□ 0.03
CCBE1-201ENST00000398179 NBPF20Q3BBV1 942 aa15.24■□□□□ 0.03
CCBE1-201ENST00000398179 ZHX3Q9H4I2 956 aa15.24■□□□□ 0.03
CCBE1-201ENST00000398179 RABEP2Q9H5N1 569 aa15.24■□□□□ 0.03
CCBE1-201ENST00000398179 OFD1O75665 1012 aa15.23■□□□□ 0.03
CCBE1-201ENST00000398179 C10orf67Q8IYJ2 551 aa15.23■□□□□ 0.03
CCBE1-201ENST00000398179 AKAP17AQ02040 695 aaKnown RBP15.23■□□□□ 0.03
CCBE1-201ENST00000398179 WWC2Q6AWC2 1192 aa15.23■□□□□ 0.03
CCBE1-201ENST00000398179 RINLQ6ZS11 566 aa15.23■□□□□ 0.03
CCBE1-201ENST00000398179 ARMC9Q7Z3E5 817 aa15.23■□□□□ 0.03
CCBE1-201ENST00000398179 SREK1Q8WXA9 508 aaKnown RBP15.23■□□□□ 0.03
CCBE1-201ENST00000398179 NOL10Q9BSC4 688 aaKnown RBP15.23■□□□□ 0.03
CCBE1-201ENST00000398179 LUZP1Q86V48 1076 aa15.22■□□□□ 0.03
CCBE1-201ENST00000398179 ATICP31939 592 aa15.22■□□□□ 0.03
CCBE1-201ENST00000398179 CFAP57Q96MR6 1250 aa15.22■□□□□ 0.03
CCBE1-201ENST00000398179 CCDC172P0C7W6 258 aa15.22■□□□□ 0.03
CCBE1-201ENST00000398179 METTL14Q9HCE5 456 aaKnown RBP15.22■□□□□ 0.03
CCBE1-201ENST00000398179 NUCB1Q02818 461 aa15.22■□□□□ 0.03
CCBE1-201ENST00000398179 IKQ13123 557 aaPredicted RBP15.22■□□□□ 0.03
CCBE1-201ENST00000398179 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms