RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
LSS-202ENST00000397728 SYCP2Q9BX26 1530 aa19.31■□□□□ 0.68
LSS-202ENST00000397728 SMG6Q86US8 1419 aaKnown RBP19.31■□□□□ 0.68
LSS-202ENST00000397728 CNTLNQ9NXG0 1405 aa19.31■□□□□ 0.68
LSS-202ENST00000397728 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
LSS-202ENST00000397728 TRIM6-TRIM34B2RNG4 842 aa19.3■□□□□ 0.68
LSS-202ENST00000397728 PHF8Q9UPP1 1060 aa19.3■□□□□ 0.68
LSS-202ENST00000397728 ADAMTS8Q9UP79 889 aa19.3■□□□□ 0.68
LSS-202ENST00000397728 GOLGA6L22H0YM25 854 aa19.3■□□□□ 0.68
LSS-202ENST00000397728 AIMP1Q12904 312 aaKnown RBP19.3■□□□□ 0.68
LSS-202ENST00000397728 RBM42Q9BTD8 480 aaKnown RBP19.3■□□□□ 0.68
LSS-202ENST00000397728 TULP1O00294 542 aaPredicted RBP19.29■□□□□ 0.68
LSS-202ENST00000397728 ADAMTS2O95450 1211 aa19.29■□□□□ 0.68
LSS-202ENST00000397728 PLIN1O60240 522 aa19.29■□□□□ 0.68
LSS-202ENST00000397728 NOS1P29475 1434 aa19.28■□□□□ 0.68
LSS-202ENST00000397728 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
LSS-202ENST00000397728 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
LSS-202ENST00000397728 HSP90AB1P08238 724 aaKnown RBP19.27■□□□□ 0.68
LSS-202ENST00000397728 SF3B2Q13435 895 aaKnown RBP19.27■□□□□ 0.68
LSS-202ENST00000397728 CEP170Q5SW79 1584 aa19.26■□□□□ 0.67
LSS-202ENST00000397728 DISP1Q96F81 1524 aa19.26■□□□□ 0.67
LSS-202ENST00000397728 ZNF530Q6P9A1 599 aaPredicted RBP19.26■□□□□ 0.67
LSS-202ENST00000397728 ABCC10Q5T3U5 1492 aa19.25■□□□□ 0.67
LSS-202ENST00000397728 CFAP44Q96MT7 982 aa19.25■□□□□ 0.67
LSS-202ENST00000397728 WASLO00401 505 aaPredicted RBP19.25■□□□□ 0.67
LSS-202ENST00000397728 COG6Q9Y2V7 657 aa19.25■□□□□ 0.67
LSS-202ENST00000397728 ZRSR1Q15695 479 aaKnown RBP19.24■□□□□ 0.67
LSS-202ENST00000397728 UHRF1BP1LA0JNW5 1464 aa19.24■□□□□ 0.67
LSS-202ENST00000397728 CADPS2Q86UW7 1296 aa19.24■□□□□ 0.67
LSS-202ENST00000397728 RIC3Q7Z5B4 369 aa19.24■□□□□ 0.67
LSS-202ENST00000397728 KCNH5Q8NCM2 988 aa19.23■□□□□ 0.67
LSS-202ENST00000397728 API5Q9BZZ5 524 aaKnown RBP19.23■□□□□ 0.67
LSS-202ENST00000397728 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
LSS-202ENST00000397728 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
LSS-202ENST00000397728 FAM135AQ9P2D6 1515 aa19.22■□□□□ 0.67
LSS-202ENST00000397728 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
LSS-202ENST00000397728 C14orf93Q9H972 538 aaKnown RBP19.21■□□□□ 0.67
LSS-202ENST00000397728 SPG7Q9UQ90 795 aa19.21■□□□□ 0.67
LSS-202ENST00000397728 NGLY1Q96IV0 654 aa19.2■□□□□ 0.66
LSS-202ENST00000397728 CABP4P57796 275 aa19.2■□□□□ 0.66
LSS-202ENST00000397728 ABCA5Q8WWZ7 1642 aa19.2■□□□□ 0.66
LSS-202ENST00000397728 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
LSS-202ENST00000397728 NME9Q86XW9 330 aa19.19■□□□□ 0.66
LSS-202ENST00000397728 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
LSS-202ENST00000397728 NSD3Q9BZ95 1437 aa19.18■□□□□ 0.66
LSS-202ENST00000397728 DUOX2Q9NRD8 1548 aa19.18■□□□□ 0.66
LSS-202ENST00000397728 KRT28Q7Z3Y7 464 aa19.18■□□□□ 0.66
LSS-202ENST00000397728 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
LSS-202ENST00000397728 TOMM22Q9NS69 142 aa19.17■□□□□ 0.66
LSS-202ENST00000397728 ZMYM3Q14202 1370 aa19.17■□□□□ 0.66
LSS-202ENST00000397728 DZIP1LQ8IYY4 767 aaKnown RBP19.17■□□□□ 0.66
LSS-202ENST00000397728 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
LSS-202ENST00000397728 TOM1O60784 492 aa19.16■□□□□ 0.66
LSS-202ENST00000397728 ANKRD45Q5TZF3 282 aa19.16■□□□□ 0.66
LSS-202ENST00000397728 ERICH6BQ5W0A0 696 aa19.16■□□□□ 0.66
LSS-202ENST00000397728 MSH6P52701 1360 aa19.15■□□□□ 0.66
LSS-202ENST00000397728 NCKAP5LQ9HCH0 1330 aa19.14■□□□□ 0.65
LSS-202ENST00000397728 CDK11BP21127 795 aaKnown RBP19.14■□□□□ 0.65
LSS-202ENST00000397728 VPS37DQ86XT2 251 aa19.14■□□□□ 0.65
LSS-202ENST00000397728 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.65
LSS-202ENST00000397728 DDX19BQ9UMR2 479 aa19.13■□□□□ 0.65
LSS-202ENST00000397728 SPRYD3Q8NCJ5 442 aa19.13■□□□□ 0.65
LSS-202ENST00000397728 PPP1R1BQ9UD71 204 aaPredicted RBP19.13■□□□□ 0.65
LSS-202ENST00000397728 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
LSS-202ENST00000397728 RRP1P56182 461 aaKnown RBP19.13■□□□□ 0.65
LSS-202ENST00000397728 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
LSS-202ENST00000397728 RILPL2Q969X0 211 aa19.12■□□□□ 0.65
LSS-202ENST00000397728 MFAP1P55081 439 aaKnown RBP19.11■□□□□ 0.65
LSS-202ENST00000397728 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
LSS-202ENST00000397728 FBXW7Q969H0 707 aa19.11■□□□□ 0.65
LSS-202ENST00000397728 CRBNQ96SW2 442 aa19.11■□□□□ 0.65
LSS-202ENST00000397728 GNL2Q13823 731 aaKnown RBP19.11■□□□□ 0.65
LSS-202ENST00000397728 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
LSS-202ENST00000397728 LRPPRCP42704 1394 aaKnown RBP19.1■□□□□ 0.65
LSS-202ENST00000397728 G3BP1Q13283 466 aaKnown RBP eCLIP19.1■□□□□ 0.65
LSS-202ENST00000397728 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.1■□□□□ 0.65
LSS-202ENST00000397728 HDGFL1Q5TGJ6 251 aa19.1■□□□□ 0.65
LSS-202ENST00000397728 EXOC6Q8TAG9 804 aa19.1■□□□□ 0.65
LSS-202ENST00000397728 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
LSS-202ENST00000397728 USHBP1Q8N6Y0 703 aa19.09■□□□□ 0.65
LSS-202ENST00000397728 EXOSC9Q06265 439 aaKnown RBP19.09■□□□□ 0.65
LSS-202ENST00000397728 GOLGA6L4A6NEF3 574 aa19.09■□□□□ 0.65
LSS-202ENST00000397728 KIF6Q6ZMV9 814 aa19.09■□□□□ 0.65
LSS-202ENST00000397728 TSR2Q969E8 191 aaKnown RBP19.08■□□□□ 0.65
LSS-202ENST00000397728 TWISTNBQ3B726 338 aaPredicted RBP19.08■□□□□ 0.65
LSS-202ENST00000397728 ACEP12821 1306 aa19.08■□□□□ 0.64
LSS-202ENST00000397728 EMILIN1Q9Y6C2 1016 aa19.07■□□□□ 0.64
LSS-202ENST00000397728 IFIT2P09913 472 aaKnown RBP19.07■□□□□ 0.64
LSS-202ENST00000397728 CDCA7LQ96GN5 454 aa19.07■□□□□ 0.64
LSS-202ENST00000397728 RPRD2Q5VT52 1461 aaKnown RBP19.07■□□□□ 0.64
LSS-202ENST00000397728 UBTFL1P0CB47 393 aaPredicted RBP19.06■□□□□ 0.64
LSS-202ENST00000397728 CHRNA2Q15822 529 aa19.06■□□□□ 0.64
LSS-202ENST00000397728 PNISRQ8TF01 805 aaKnown RBP19.06■□□□□ 0.64
LSS-202ENST00000397728 ATP10AO60312 1499 aa19.05■□□□□ 0.64
LSS-202ENST00000397728 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
LSS-202ENST00000397728 SCAF11Q99590 1463 aaKnown RBP19.05■□□□□ 0.64
LSS-202ENST00000397728 FCHSD2O94868 740 aa19.05■□□□□ 0.64
LSS-202ENST00000397728 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
LSS-202ENST00000397728 PTCD1O75127 700 aaKnown RBP19.04■□□□□ 0.64
LSS-202ENST00000397728 MYL6BP14649 208 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms