RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
TSPAN4-205ENST00000397406 ROBO2Q9HCK4 1378 aa23.87■■□□□ 1.41
TSPAN4-205ENST00000397406 ATF3P18847 181 aa23.86■■□□□ 1.41
TSPAN4-205ENST00000397406 HIRIP3Q9BW71 556 aaPredicted RBP23.86■■□□□ 1.41
TSPAN4-205ENST00000397406 BRINP3Q76B58 766 aa23.85■■□□□ 1.41
TSPAN4-205ENST00000397406 DCCP43146 1447 aa23.85■■□□□ 1.41
TSPAN4-205ENST00000397406 MST1RQ04912 1400 aa23.85■■□□□ 1.41
TSPAN4-205ENST00000397406 COL16A1Q07092 1604 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-205ENST00000397406 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-205ENST00000397406 ADGRL3Q9HAR2 1447 aa23.83■■□□□ 1.41
TSPAN4-205ENST00000397406 TMEM132EQ6IEE7 984 aa23.83■■□□□ 1.4
TSPAN4-205ENST00000397406 PHLPP1O60346 1717 aa23.82■■□□□ 1.4
TSPAN4-205ENST00000397406 PTCH1Q13635 1447 aa23.82■■□□□ 1.4
TSPAN4-205ENST00000397406 AHDC1Q5TGY3 1603 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-205ENST00000397406 NALCNQ8IZF0 1738 aa23.8■■□□□ 1.4
TSPAN4-205ENST00000397406 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
TSPAN4-205ENST00000397406 ST20-MTHFSA0A0A6YYL1 179 aa23.79■■□□□ 1.4
TSPAN4-205ENST00000397406 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
TSPAN4-205ENST00000397406 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-205ENST00000397406 JCADQ9P266 1359 aa23.78■■□□□ 1.4
TSPAN4-205ENST00000397406 EIF3AQ14152 1382 aaKnown RBP23.77■■□□□ 1.4
TSPAN4-205ENST00000397406 QRICH2Q9H0J4 1663 aa23.76■■□□□ 1.39
TSPAN4-205ENST00000397406 DDX17Q92841 729 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-205ENST00000397406 LRP6O75581 1613 aa23.74■■□□□ 1.39
TSPAN4-205ENST00000397406 TRAK1Q9UPV9 953 aa23.74■■□□□ 1.39
TSPAN4-205ENST00000397406 LRPPRCP42704 1394 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-205ENST00000397406 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
TSPAN4-205ENST00000397406 POTEAQ6S8J7 498 aa23.73■■□□□ 1.39
TSPAN4-205ENST00000397406 C1orf167Q5SNV9 1468 aa23.72■■□□□ 1.39
TSPAN4-205ENST00000397406 TESK2Q96S53 571 aa23.72■■□□□ 1.39
TSPAN4-205ENST00000397406 ABCC11Q96J66 1382 aa23.7■■□□□ 1.39
TSPAN4-205ENST00000397406 TECPR2O15040 1411 aa23.7■■□□□ 1.38
TSPAN4-205ENST00000397406 PLEKHH1Q9ULM0 1364 aa23.7■■□□□ 1.38
TSPAN4-205ENST00000397406 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
TSPAN4-205ENST00000397406 WAPLQ7Z5K2 1190 aa23.69■■□□□ 1.38
TSPAN4-205ENST00000397406 STK26Q9P289 416 aa23.69■■□□□ 1.38
TSPAN4-205ENST00000397406 ORAI2Q96SN7 254 aa23.68■■□□□ 1.38
TSPAN4-205ENST00000397406 SBNO2Q9Y2G9 1366 aa23.68■■□□□ 1.38
TSPAN4-205ENST00000397406 CENPJQ9HC77 1338 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-205ENST00000397406 NHSL1Q5SYE7 1610 aa23.67■■□□□ 1.38
TSPAN4-205ENST00000397406 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
TSPAN4-205ENST00000397406 CCDC7Q96M83 1385 aa23.66■■□□□ 1.38
TSPAN4-205ENST00000397406 SPATA31A6Q5VVP1 1343 aa23.65■■□□□ 1.38
TSPAN4-205ENST00000397406 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
TSPAN4-205ENST00000397406 KIF7Q2M1P5 1343 aa23.63■■□□□ 1.37
TSPAN4-205ENST00000397406 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
TSPAN4-205ENST00000397406 PRAM1Q96QH2 718 aa23.6■■□□□ 1.37
TSPAN4-205ENST00000397406 TMF1P82094 1093 aa23.59■■□□□ 1.37
TSPAN4-205ENST00000397406 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
TSPAN4-205ENST00000397406 PNPLA6Q8IY17 1366 aa23.59■■□□□ 1.37
TSPAN4-205ENST00000397406 SOS2Q07890 1332 aaPredicted RBP23.58■■□□□ 1.37
TSPAN4-205ENST00000397406 TULP4Q9NRJ4 1543 aa23.58■■□□□ 1.37
TSPAN4-205ENST00000397406 SLC24A1O60721 1099 aa23.58■■□□□ 1.36
TSPAN4-205ENST00000397406 LRRC59Q96AG4 307 aaKnown RBP23.58■■□□□ 1.36
TSPAN4-205ENST00000397406 POGKQ9P215 609 aa23.57■■□□□ 1.36
TSPAN4-205ENST00000397406 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-205ENST00000397406 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-205ENST00000397406 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-205ENST00000397406 NUTM2FA1L443 756 aa23.54■■□□□ 1.36
TSPAN4-205ENST00000397406 SAFB2Q14151 953 aaKnown RBP eCLIP23.54■■□□□ 1.36
TSPAN4-205ENST00000397406 MYOM1P52179 1685 aa23.54■■□□□ 1.36
TSPAN4-205ENST00000397406 DDX10Q13206 875 aaKnown RBP23.53■■□□□ 1.36
TSPAN4-205ENST00000397406 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
TSPAN4-205ENST00000397406 ESCO1Q5FWF5 840 aa23.51■■□□□ 1.35
TSPAN4-205ENST00000397406 MEX3CQ5U5Q3 659 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-205ENST00000397406 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
TSPAN4-205ENST00000397406 MINK1Q8N4C8 1332 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-205ENST00000397406 PXDNQ92626 1479 aa23.5■■□□□ 1.35
TSPAN4-205ENST00000397406 CDCA8Q53HL2 280 aa23.5■■□□□ 1.35
TSPAN4-205ENST00000397406 EVC2Q86UK5 1308 aa23.49■■□□□ 1.35
TSPAN4-205ENST00000397406 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
TSPAN4-205ENST00000397406 FOXO3O43524 673 aa23.48■■□□□ 1.35
TSPAN4-205ENST00000397406 XPCQ01831 940 aaPredicted RBP23.48■■□□□ 1.35
TSPAN4-205ENST00000397406 FMN2Q9NZ56 1722 aa23.46■■□□□ 1.35
TSPAN4-205ENST00000397406 AFF2P51816 1311 aa23.45■■□□□ 1.34
TSPAN4-205ENST00000397406 PUS7Q96PZ0 661 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-205ENST00000397406 NPHP3Q7Z494 1330 aa23.44■■□□□ 1.34
TSPAN4-205ENST00000397406 ZNF772Q68DY9 489 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-205ENST00000397406 C8orf37Q96NL8 207 aa23.42■■□□□ 1.34
TSPAN4-205ENST00000397406 ADAMTS2O95450 1211 aa23.41■■□□□ 1.34
TSPAN4-205ENST00000397406 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
TSPAN4-205ENST00000397406 WASLO00401 505 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-205ENST00000397406 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
TSPAN4-205ENST00000397406 COL22A1Q8NFW1 1626 aaPredicted RBP23.39■■□□□ 1.34
TSPAN4-205ENST00000397406 USP32Q8NFA0 1604 aa23.38■■□□□ 1.33
TSPAN4-205ENST00000397406 ATAD2Q6PL18 1390 aa23.37■■□□□ 1.33
TSPAN4-205ENST00000397406 SRPK2P78362 688 aaKnown RBP23.37■■□□□ 1.33
TSPAN4-205ENST00000397406 TOPAZ1Q8N9V7 1692 aa23.36■■□□□ 1.33
TSPAN4-205ENST00000397406 PRR36Q9H6K5 1346 aa23.36■■□□□ 1.33
TSPAN4-205ENST00000397406 PHF8Q9UPP1 1060 aa23.35■■□□□ 1.33
TSPAN4-205ENST00000397406 SPATA31A3Q5VYP0 1347 aa23.35■■□□□ 1.33
TSPAN4-205ENST00000397406 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-205ENST00000397406 ATP7BP35670 1465 aa23.34■■□□□ 1.33
TSPAN4-205ENST00000397406 RXRBP28702 533 aa23.33■■□□□ 1.33
TSPAN4-205ENST00000397406 KRT28Q7Z3Y7 464 aa23.33■■□□□ 1.33
TSPAN4-205ENST00000397406 NINLQ9Y2I6 1382 aa23.33■■□□□ 1.33
TSPAN4-205ENST00000397406 QTRT2Q9H974 415 aaKnown RBP23.33■■□□□ 1.32
TSPAN4-205ENST00000397406 KIF1AQ12756 1690 aa23.32■■□□□ 1.32
TSPAN4-205ENST00000397406 ITSN1Q15811 1721 aa23.32■■□□□ 1.32
TSPAN4-205ENST00000397406 FNBP4Q8N3X1 1017 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms