RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 ABCC11Q96J66 1382 aa23.12■■□□□ 1.29
SCNN1A-205ENST00000396966 SLIT1O75093 1534 aa23.11■■□□□ 1.29
SCNN1A-205ENST00000396966 ADAMTSL3P82987 1691 aa23.1■■□□□ 1.29
SCNN1A-205ENST00000396966 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
SCNN1A-205ENST00000396966 EID1Q9Y6B2 187 aa23.09■■□□□ 1.29
SCNN1A-205ENST00000396966 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
SCNN1A-205ENST00000396966 SLC12A5Q9H2X9 1139 aa23.09■■□□□ 1.29
SCNN1A-205ENST00000396966 CARD14Q9BXL6 1004 aa23.08■■□□□ 1.29
SCNN1A-205ENST00000396966 NINLQ9Y2I6 1382 aa23.08■■□□□ 1.29
SCNN1A-205ENST00000396966 USP32Q8NFA0 1604 aa23.08■■□□□ 1.29
SCNN1A-205ENST00000396966 SRPK2P78362 688 aaKnown RBP23.08■■□□□ 1.28
SCNN1A-205ENST00000396966 CABP2Q9NPB3 220 aa23.08■■□□□ 1.28
SCNN1A-205ENST00000396966 METP08581 1390 aa23.08■■□□□ 1.28
SCNN1A-205ENST00000396966 ARHGAP23Q9P227 1491 aa23.08■■□□□ 1.28
SCNN1A-205ENST00000396966 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
SCNN1A-205ENST00000396966 TXNDC2Q86VQ3 553 aa23.07■■□□□ 1.28
SCNN1A-205ENST00000396966 THEMISQ8N1K5 641 aaPredicted RBP23.07■■□□□ 1.28
SCNN1A-205ENST00000396966 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
SCNN1A-205ENST00000396966 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
SCNN1A-205ENST00000396966 NSD3Q9BZ95 1437 aa23.05■■□□□ 1.28
SCNN1A-205ENST00000396966 LTKP29376 864 aa23.05■■□□□ 1.28
SCNN1A-205ENST00000396966 CPS1P31327 1500 aa23.04■■□□□ 1.28
SCNN1A-205ENST00000396966 ADAMTS13Q76LX8 1427 aa23.04■■□□□ 1.28
SCNN1A-205ENST00000396966 ANKRD36BQ8N2N9 1353 aa23.04■■□□□ 1.28
SCNN1A-205ENST00000396966 CEP170BQ9Y4F5 1589 aaPredicted RBP23.04■■□□□ 1.28
SCNN1A-205ENST00000396966 PPP2R1AP30153 589 aa23.04■■□□□ 1.28
SCNN1A-205ENST00000396966 TECPR2O15040 1411 aa23.03■■□□□ 1.28
SCNN1A-205ENST00000396966 SIRT1Q96EB6 747 aa23.03■■□□□ 1.28
SCNN1A-205ENST00000396966 FAM135BQ49AJ0 1406 aa23.02■■□□□ 1.28
SCNN1A-205ENST00000396966 WAPLQ7Z5K2 1190 aa23.02■■□□□ 1.28
SCNN1A-205ENST00000396966 CDK19Q9BWU1 502 aa23■■□□□ 1.27
SCNN1A-205ENST00000396966 ZNF142P52746 1687 aaPredicted RBP23■■□□□ 1.27
SCNN1A-205ENST00000396966 PLEKHH1Q9ULM0 1364 aa23■■□□□ 1.27
SCNN1A-205ENST00000396966 SETD1BQ9UPS6 1966 aaKnown RBP23■■□□□ 1.27
SCNN1A-205ENST00000396966 MED14O60244 1454 aa22.99■■□□□ 1.27
SCNN1A-205ENST00000396966 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
SCNN1A-205ENST00000396966 CGNL1Q0VF96 1302 aa22.98■■□□□ 1.27
SCNN1A-205ENST00000396966 INSRP06213 1382 aa22.96■■□□□ 1.27
SCNN1A-205ENST00000396966 TERF2IPQ9NYB0 399 aa22.96■■□□□ 1.27
SCNN1A-205ENST00000396966 NSD2O96028 1365 aa22.95■■□□□ 1.26
SCNN1A-205ENST00000396966 A0A1W2PP64 1363 aa22.94■■□□□ 1.26
SCNN1A-205ENST00000396966 MORC1Q86VD1 984 aa22.93■■□□□ 1.26
SCNN1A-205ENST00000396966 SLC26A8Q96RN1 970 aa22.93■■□□□ 1.26
SCNN1A-205ENST00000396966 TBX22Q9Y458 520 aa22.93■■□□□ 1.26
SCNN1A-205ENST00000396966 ANKRD26Q9UPS8 1709 aa22.92■■□□□ 1.26
SCNN1A-205ENST00000396966 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
SCNN1A-205ENST00000396966 HDGFL2Q7Z4V5 671 aaPredicted RBP22.92■■□□□ 1.26
SCNN1A-205ENST00000396966 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
SCNN1A-205ENST00000396966 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
SCNN1A-205ENST00000396966 ROBO2Q9HCK4 1378 aa22.9■■□□□ 1.26
SCNN1A-205ENST00000396966 KIF20BQ96Q89 1820 aa22.9■■□□□ 1.26
SCNN1A-205ENST00000396966 BLMP54132 1417 aaPredicted RBP22.89■■□□□ 1.26
SCNN1A-205ENST00000396966 ADGRB2O60241 1585 aa22.89■■□□□ 1.26
SCNN1A-205ENST00000396966 ATP7BP35670 1465 aa22.89■■□□□ 1.26
SCNN1A-205ENST00000396966 CABP1Q9NZU7 370 aa22.88■■□□□ 1.25
SCNN1A-205ENST00000396966 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.88■■□□□ 1.25
SCNN1A-205ENST00000396966 PTPRUQ92729 1446 aa22.87■■□□□ 1.25
SCNN1A-205ENST00000396966 AMOTL2Q9Y2J4 779 aa22.85■■□□□ 1.25
SCNN1A-205ENST00000396966 SENP3-EIF4A1A0A087X0R7 540 aa22.85■■□□□ 1.25
SCNN1A-205ENST00000396966 ITSN1Q15811 1721 aa22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 POLR3AO14802 1390 aaPredicted RBP22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 ANKLE2Q86XL3 938 aa22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 XRN1Q8IZH2 1706 aaKnown RBP22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 PTCH1Q13635 1447 aa22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 SMG6Q86US8 1419 aaKnown RBP22.84■■□□□ 1.25
SCNN1A-205ENST00000396966 PIK3R4Q99570 1358 aa22.82■■□□□ 1.24
SCNN1A-205ENST00000396966 AKAP12Q02952 1782 aa22.82■■□□□ 1.24
SCNN1A-205ENST00000396966 NUDT16Q96DE0 195 aaKnown RBP22.82■■□□□ 1.24
SCNN1A-205ENST00000396966 TNNT2P45379 298 aaPredicted RBP22.81■■□□□ 1.24
SCNN1A-205ENST00000396966 CDC42BPGQ6DT37 1551 aa22.8■■□□□ 1.24
SCNN1A-205ENST00000396966 ERICH6BQ5W0A0 696 aa22.8■■□□□ 1.24
SCNN1A-205ENST00000396966 RBM19Q9Y4C8 960 aaKnown RBP22.8■■□□□ 1.24
SCNN1A-205ENST00000396966 CCDC61Q9Y6R9 512 aa22.8■■□□□ 1.24
SCNN1A-205ENST00000396966 MON2Q7Z3U7 1717 aa22.8■■□□□ 1.24
SCNN1A-205ENST00000396966 MYT1Q01538 1121 aa22.79■■□□□ 1.24
SCNN1A-205ENST00000396966 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
SCNN1A-205ENST00000396966 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
SCNN1A-205ENST00000396966 TOPAZ1Q8N9V7 1692 aa22.78■■□□□ 1.24
SCNN1A-205ENST00000396966 PPP4R2Q9NY27 417 aa22.78■■□□□ 1.24
SCNN1A-205ENST00000396966 SHPRHQ149N8 1683 aa22.78■■□□□ 1.24
SCNN1A-205ENST00000396966 CPSF1Q10570 1443 aaKnown RBP22.78■■□□□ 1.24
SCNN1A-205ENST00000396966 FYB1O15117 783 aa22.77■■□□□ 1.24
SCNN1A-205ENST00000396966 CFAP53Q96M91 514 aa22.77■■□□□ 1.24
SCNN1A-205ENST00000396966 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.24
SCNN1A-205ENST00000396966 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
SCNN1A-205ENST00000396966 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
SCNN1A-205ENST00000396966 EDC4Q6P2E9 1401 aaKnown RBP22.75■■□□□ 1.23
SCNN1A-205ENST00000396966 MTHFSP49914 203 aa22.75■■□□□ 1.23
SCNN1A-205ENST00000396966 ZNF692Q9BU19 519 aaPredicted RBP22.73■■□□□ 1.23
SCNN1A-205ENST00000396966 PRR36Q9H6K5 1346 aa22.72■■□□□ 1.23
SCNN1A-205ENST00000396966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
SCNN1A-205ENST00000396966 B4GALNT3Q6L9W6 998 aa22.7■■□□□ 1.22
SCNN1A-205ENST00000396966 RGPD8O14715 1765 aaPredicted RBP22.7■■□□□ 1.22
SCNN1A-205ENST00000396966 NCKAP5LQ9HCH0 1330 aa22.7■■□□□ 1.22
SCNN1A-205ENST00000396966 KCNA6P17658 529 aa22.69■■□□□ 1.22
SCNN1A-205ENST00000396966 NPHP4O75161 1426 aaPredicted RBP22.69■■□□□ 1.22
SCNN1A-205ENST00000396966 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
SCNN1A-205ENST00000396966 PLEKHG3A1L390 1219 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms