RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 AKNAQ7Z591 1439 aa19.06■□□□□ 0.64
GNE-202ENST00000396594 ERICH2A1L162 156 aa19.05■□□□□ 0.64
GNE-202ENST00000396594 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
GNE-202ENST00000396594 TOMM22Q9NS69 142 aa19.04■□□□□ 0.64
GNE-202ENST00000396594 DHX8Q14562 1220 aaKnown RBP19.04■□□□□ 0.64
GNE-202ENST00000396594 SENP3-EIF4A1A0A087X0R7 540 aa19.04■□□□□ 0.64
GNE-202ENST00000396594 PSMA5P28066 241 aa19.04■□□□□ 0.64
GNE-202ENST00000396594 WDR63Q8IWG1 891 aa19.04■□□□□ 0.64
GNE-202ENST00000396594 FKBP5Q13451 457 aaPredicted RBP19.03■□□□□ 0.64
GNE-202ENST00000396594 PDE3AQ14432 1141 aa19.03■□□□□ 0.64
GNE-202ENST00000396594 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
GNE-202ENST00000396594 IL27Q8NEV9 243 aa19.03■□□□□ 0.64
GNE-202ENST00000396594 TULP1O00294 542 aaPredicted RBP19.03■□□□□ 0.64
GNE-202ENST00000396594 ERBINQ96RT1 1412 aa19.02■□□□□ 0.64
GNE-202ENST00000396594 TPRNQ4KMQ1 711 aa19.02■□□□□ 0.64
GNE-202ENST00000396594 GOLGA6L1Q8N7Z2 621 aa19.02■□□□□ 0.64
GNE-202ENST00000396594 CTDP1Q9Y5B0 961 aaPredicted RBP19.02■□□□□ 0.64
GNE-202ENST00000396594 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.64
GNE-202ENST00000396594 GCC1Q96CN9 775 aa19.01■□□□□ 0.63
GNE-202ENST00000396594 RTEL1-TNFRSF6BF6WH68 1400 aa19.01■□□□□ 0.63
GNE-202ENST00000396594 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
GNE-202ENST00000396594 CCDC70Q6NSX1 233 aa19.01■□□□□ 0.63
GNE-202ENST00000396594 VPS37DQ86XT2 251 aa19■□□□□ 0.63
GNE-202ENST00000396594 GOLGA6L19H0YKK7 550 aa19■□□□□ 0.63
GNE-202ENST00000396594 XBP1P17861 261 aa19■□□□□ 0.63
GNE-202ENST00000396594 TATP17735 454 aaPredicted RBP19■□□□□ 0.63
GNE-202ENST00000396594 SAFBQ15424 915 aaKnown RBP eCLIP19■□□□□ 0.63
GNE-202ENST00000396594 PDE4AP27815 886 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 NSD2O96028 1365 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 NOC3LQ8WTT2 800 aaKnown RBP18.99■□□□□ 0.63
GNE-202ENST00000396594 UBTFL1P0CB47 393 aaPredicted RBP18.99■□□□□ 0.63
GNE-202ENST00000396594 NLRP6P59044 892 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 RRP7AQ9Y3A4 280 aaKnown RBP18.99■□□□□ 0.63
GNE-202ENST00000396594 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 CPLX1O14810 134 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 CDC45O75419 566 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 CHMP5Q9NZZ3 219 aa18.99■□□□□ 0.63
GNE-202ENST00000396594 BRMS1Q9HCU9 246 aa18.98■□□□□ 0.63
GNE-202ENST00000396594 TPD52L1Q16890 204 aaPredicted RBP18.98■□□□□ 0.63
GNE-202ENST00000396594 CCT4P50991 539 aaKnown RBP18.98■□□□□ 0.63
GNE-202ENST00000396594 CRBNQ96SW2 442 aa18.98■□□□□ 0.63
GNE-202ENST00000396594 TAOK2Q9UL54 1235 aa18.98■□□□□ 0.63
GNE-202ENST00000396594 ABCC11Q96J66 1382 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 KIF6Q6ZMV9 814 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 RIC3Q7Z5B4 369 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 CNTROBQ8N137 903 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 RBM33Q96EV2 1170 aaKnown RBP18.97■□□□□ 0.63
GNE-202ENST00000396594 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
GNE-202ENST00000396594 SLC3A2P08195 630 aaKnown RBP18.96■□□□□ 0.63
GNE-202ENST00000396594 PROSER2Q86WR7 435 aaPredicted RBP18.96■□□□□ 0.63
GNE-202ENST00000396594 SLKQ9H2G2 1235 aaPredicted RBP18.96■□□□□ 0.63
GNE-202ENST00000396594 TCEAL9Q9UHQ7 104 aa18.96■□□□□ 0.63
GNE-202ENST00000396594 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
GNE-202ENST00000396594 LETM1O95202 739 aaPredicted RBP18.95■□□□□ 0.62
GNE-202ENST00000396594 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
GNE-202ENST00000396594 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
GNE-202ENST00000396594 NUTM2FA1L443 756 aa18.95■□□□□ 0.62
GNE-202ENST00000396594 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
GNE-202ENST00000396594 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
GNE-202ENST00000396594 TEX14Q8IWB6 1497 aa18.94■□□□□ 0.62
GNE-202ENST00000396594 EIF2S2P20042 333 aaKnown RBP18.94■□□□□ 0.62
GNE-202ENST00000396594 SART3Q15020 963 aaKnown RBP18.94■□□□□ 0.62
GNE-202ENST00000396594 SRCIN1Q9C0H9 1055 aa18.94■□□□□ 0.62
GNE-202ENST00000396594 DEKP35659 375 aaKnown RBP18.94■□□□□ 0.62
GNE-202ENST00000396594 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
GNE-202ENST00000396594 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
GNE-202ENST00000396594 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.94■□□□□ 0.62
GNE-202ENST00000396594 BECN2A8MW95 431 aa18.94■□□□□ 0.62
GNE-202ENST00000396594 IPO7O95373 1038 aaKnown RBP18.93■□□□□ 0.62
GNE-202ENST00000396594 ANO2Q9NQ90 1003 aa18.93■□□□□ 0.62
GNE-202ENST00000396594 GNL3LQ9NVN8 582 aaKnown RBP18.93■□□□□ 0.62
GNE-202ENST00000396594 RALYLQ86SE5 291 aaKnown RBP18.93■□□□□ 0.62
GNE-202ENST00000396594 CLASRPQ8N2M8 674 aaKnown RBP18.93■□□□□ 0.62
GNE-202ENST00000396594 ADGRL1O94910 1474 aa18.93■□□□□ 0.62
GNE-202ENST00000396594 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
GNE-202ENST00000396594 DHX16O60231 1041 aaKnown RBP18.92■□□□□ 0.62
GNE-202ENST00000396594 PDCP20941 246 aa18.92■□□□□ 0.62
GNE-202ENST00000396594 SPRYD3Q8NCJ5 442 aa18.92■□□□□ 0.62
GNE-202ENST00000396594 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
GNE-202ENST00000396594 LRPPRCP42704 1394 aaKnown RBP18.91■□□□□ 0.62
GNE-202ENST00000396594 GPS2Q13227 327 aa18.91■□□□□ 0.62
GNE-202ENST00000396594 ZSCAN25Q6NSZ9 544 aa18.91■□□□□ 0.62
GNE-202ENST00000396594 NCOA1Q15788 1441 aa18.91■□□□□ 0.62
GNE-202ENST00000396594 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
GNE-202ENST00000396594 FCHSD2O94868 740 aa18.9■□□□□ 0.62
GNE-202ENST00000396594 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
GNE-202ENST00000396594 DENND4BO75064 1496 aaPredicted RBP18.9■□□□□ 0.62
GNE-202ENST00000396594 MTHFSP49914 203 aa18.89■□□□□ 0.62
GNE-202ENST00000396594 EXOC6Q8TAG9 804 aa18.89■□□□□ 0.62
GNE-202ENST00000396594 PRAM1Q96QH2 718 aa18.89■□□□□ 0.62
GNE-202ENST00000396594 NAIPQ13075 1403 aa18.89■□□□□ 0.61
GNE-202ENST00000396594 DDX49Q9Y6V7 483 aaKnown RBP18.89■□□□□ 0.61
GNE-202ENST00000396594 PIP4K2AP48426 406 aaPredicted RBP18.88■□□□□ 0.61
GNE-202ENST00000396594 SMC3Q9UQE7 1217 aa18.88■□□□□ 0.61
GNE-202ENST00000396594 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms