RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 LMOD2Q6P5Q4 547 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 DEF6Q9H4E7 631 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 PES1O00541 588 aaKnown RBP9.74□□□□□ -0.85
SOX6-202ENST00000396356 GNAI3P08754 354 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 AMPHP49418 695 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
SOX6-202ENST00000396356 HMGB3O15347 200 aaKnown RBP9.74□□□□□ -0.85
SOX6-202ENST00000396356 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
SOX6-202ENST00000396356 CBFA2T2O43439 604 aa9.73□□□□□ -0.85
SOX6-202ENST00000396356 TUBB4AP04350 444 aa9.73□□□□□ -0.85
SOX6-202ENST00000396356 ODF2Q5BJF6 829 aa9.73□□□□□ -0.85
SOX6-202ENST00000396356 GBP3Q9H0R5 595 aa9.73□□□□□ -0.85
SOX6-202ENST00000396356 FILIP1LQ4L180 1135 aa9.73□□□□□ -0.85
SOX6-202ENST00000396356 SYNJ2O15056 1496 aa9.72□□□□□ -0.85
SOX6-202ENST00000396356 GTPBP4Q9BZE4 634 aaKnown RBP9.72□□□□□ -0.85
SOX6-202ENST00000396356 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
SOX6-202ENST00000396356 FHOD3Q2V2M9 1422 aa9.72□□□□□ -0.85
SOX6-202ENST00000396356 RALYLQ86SE5 291 aaKnown RBP9.72□□□□□ -0.85
SOX6-202ENST00000396356 TEFQ10587 303 aa9.72□□□□□ -0.85
SOX6-202ENST00000396356 ZNHIT6Q9NWK9 470 aaKnown RBP9.72□□□□□ -0.85
SOX6-202ENST00000396356 R3HCC1Q9Y3T6 440 aaKnown RBP9.72□□□□□ -0.85
SOX6-202ENST00000396356 CDC45O75419 566 aa9.72□□□□□ -0.85
SOX6-202ENST00000396356 NF2P35240 595 aa9.72□□□□□ -0.85
SOX6-202ENST00000396356 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
SOX6-202ENST00000396356 PNISRQ8TF01 805 aaKnown RBP9.72□□□□□ -0.85
SOX6-202ENST00000396356 RUNDC1Q96C34 613 aa9.72□□□□□ -0.85
SOX6-202ENST00000396356 KINO60870 393 aaKnown RBP9.71□□□□□ -0.85
SOX6-202ENST00000396356 LEKR1Q6ZMV7 388 aa9.71□□□□□ -0.85
SOX6-202ENST00000396356 HOMER1Q86YM7 354 aa9.71□□□□□ -0.85
SOX6-202ENST00000396356 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.85
SOX6-202ENST00000396356 IFIT2P09913 472 aaKnown RBP9.71□□□□□ -0.85
SOX6-202ENST00000396356 CT47A1Q5JQC4 288 aaPredicted RBP9.71□□□□□ -0.85
SOX6-202ENST00000396356 GCC1Q96CN9 775 aa9.71□□□□□ -0.85
SOX6-202ENST00000396356 GAPVD1Q14C86 1478 aa9.71□□□□□ -0.86
SOX6-202ENST00000396356 PYM1Q9BRP8 204 aaKnown RBP9.71□□□□□ -0.86
SOX6-202ENST00000396356 C9orf78Q9NZ63 289 aaPredicted RBP9.71□□□□□ -0.86
SOX6-202ENST00000396356 EPS15P42566 896 aa9.71□□□□□ -0.86
SOX6-202ENST00000396356 SLKQ9H2G2 1235 aaPredicted RBP9.71□□□□□ -0.86
SOX6-202ENST00000396356 CTDP1Q9Y5B0 961 aaPredicted RBP9.71□□□□□ -0.86
SOX6-202ENST00000396356 ATAD2BQ9ULI0 1458 aa9.7□□□□□ -0.86
SOX6-202ENST00000396356 G3BP1Q13283 466 aaKnown RBP eCLIP9.7□□□□□ -0.86
SOX6-202ENST00000396356 CC2D2AQ9P2K1 1620 aa9.7□□□□□ -0.86
SOX6-202ENST00000396356 GTF2E1P29083 439 aaPredicted RBP9.7□□□□□ -0.86
SOX6-202ENST00000396356 ZNF771Q7L3S4 317 aaPredicted RBP9.7□□□□□ -0.86
SOX6-202ENST00000396356 NGDNQ8NEJ9 315 aaKnown RBP9.7□□□□□ -0.86
SOX6-202ENST00000396356 KRT32Q14532 448 aa9.7□□□□□ -0.86
SOX6-202ENST00000396356 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
SOX6-202ENST00000396356 PRKRIP1Q9H875 184 aaPredicted RBP9.7□□□□□ -0.86
SOX6-202ENST00000396356 SMC3Q9UQE7 1217 aa9.7□□□□□ -0.86
SOX6-202ENST00000396356 KIF21AQ7Z4S6 1674 aa9.7□□□□□ -0.86
SOX6-202ENST00000396356 FANCD2Q9BXW9 1451 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 DDX11Q96FC9 970 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 ITSN2Q9NZM3 1697 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 PDE4AP27815 886 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 ZSCAN25Q6NSZ9 544 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 MCM5P33992 734 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 WWC2Q6AWC2 1192 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 WASF1Q92558 559 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 FRAT2O75474 233 aaPredicted RBP9.69□□□□□ -0.86
SOX6-202ENST00000396356 GNL3LQ9NVN8 582 aaKnown RBP9.69□□□□□ -0.86
SOX6-202ENST00000396356 RPGRIP1LQ68CZ1 1315 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 GOLGA6L10A0A0M3HER8 536 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 NEMFO60524 1076 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 CNTROBQ8N137 903 aa9.69□□□□□ -0.86
SOX6-202ENST00000396356 POTEB2H3BUK9 544 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 NCOA2Q15596 1464 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 OFD1O75665 1012 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 AQRO60306 1485 aaKnown RBP eCLIP9.68□□□□□ -0.86
SOX6-202ENST00000396356 KIF3BO15066 747 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 MAP9Q49MG5 647 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 TOP2BQ02880 1626 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 PTPRGP23470 1445 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.68□□□□□ -0.86
SOX6-202ENST00000396356 LRRC9Q6ZRR7 1453 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 KIAA0754O94854 1291 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 HOOK3Q86VS8 718 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
SOX6-202ENST00000396356 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
SOX6-202ENST00000396356 PHAXQ9H814 394 aaKnown RBP9.67□□□□□ -0.86
SOX6-202ENST00000396356 ZNF287Q9HBT7 754 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 CCDC192P0DO97 292 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 GOLGA6L9A6NEM1 432 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 H0YHG0 523 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 SMC2O95347 1197 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 CFAP45Q9UL16 551 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 ABCC11Q96J66 1382 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 BICD2Q8TD16 824 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 CHMP3Q9Y3E7 222 aa9.67□□□□□ -0.86
SOX6-202ENST00000396356 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
SOX6-202ENST00000396356 GBP2P32456 591 aaPredicted RBP9.66□□□□□ -0.86
SOX6-202ENST00000396356 CCDC146Q8IYE0 955 aa9.66□□□□□ -0.86
SOX6-202ENST00000396356 PRM3Q9NNZ6 103 aa9.66□□□□□ -0.86
SOX6-202ENST00000396356 WDR33Q9C0J8 1336 aaKnown RBP9.66□□□□□ -0.86
SOX6-202ENST00000396356 SIN3AQ96ST3 1273 aa9.66□□□□□ -0.86
SOX6-202ENST00000396356 SNAPC4Q5SXM2 1469 aa9.66□□□□□ -0.86
SOX6-202ENST00000396356 CETN2P41208 172 aa9.66□□□□□ -0.86
SOX6-202ENST00000396356 MAGEC2Q9UBF1 373 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms