RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
HOXA10-202ENST00000396344 ROBO1Q9Y6N7 1651 aa23.34■■□□□ 1.33
HOXA10-202ENST00000396344 ADGRF5Q8IZF2 1346 aa23.32■■□□□ 1.32
HOXA10-202ENST00000396344 ADGRL3Q9HAR2 1447 aa23.3■■□□□ 1.32
HOXA10-202ENST00000396344 PIK3C2GO75747 1445 aa23.29■■□□□ 1.32
HOXA10-202ENST00000396344 MYOM2P54296 1465 aa23.28■■□□□ 1.32
HOXA10-202ENST00000396344 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
HOXA10-202ENST00000396344 MED1Q15648 1581 aaPredicted RBP23.26■■□□□ 1.31
HOXA10-202ENST00000396344 ROBO2Q9HCK4 1378 aa23.26■■□□□ 1.31
HOXA10-202ENST00000396344 TECPR2O15040 1411 aa23.24■■□□□ 1.31
HOXA10-202ENST00000396344 C11orf95C9JLR9 678 aaPredicted RBP23.23■■□□□ 1.31
HOXA10-202ENST00000396344 LRPPRCP42704 1394 aaKnown RBP23.23■■□□□ 1.31
HOXA10-202ENST00000396344 ABCC11Q96J66 1382 aa23.23■■□□□ 1.31
HOXA10-202ENST00000396344 MST1RQ04912 1400 aa23.22■■□□□ 1.31
HOXA10-202ENST00000396344 C14orf93Q9H972 538 aaKnown RBP23.22■■□□□ 1.31
HOXA10-202ENST00000396344 NALCNQ8IZF0 1738 aa23.2■■□□□ 1.31
HOXA10-202ENST00000396344 AHDC1Q5TGY3 1603 aaPredicted RBP23.2■■□□□ 1.3
HOXA10-202ENST00000396344 GTF3C3Q9Y5Q9 886 aa23.2■■□□□ 1.3
HOXA10-202ENST00000396344 PHLPP1O60346 1717 aa23.2■■□□□ 1.3
HOXA10-202ENST00000396344 BRINP3Q76B58 766 aa23.18■■□□□ 1.3
HOXA10-202ENST00000396344 SIRT1Q96EB6 747 aa23.18■■□□□ 1.3
HOXA10-202ENST00000396344 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
HOXA10-202ENST00000396344 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
HOXA10-202ENST00000396344 ST20-MTHFSA0A0A6YYL1 179 aa23.17■■□□□ 1.3
HOXA10-202ENST00000396344 KNDC1Q76NI1 1749 aa23.17■■□□□ 1.3
HOXA10-202ENST00000396344 EIF3AQ14152 1382 aaKnown RBP23.17■■□□□ 1.3
HOXA10-202ENST00000396344 JCADQ9P266 1359 aa23.17■■□□□ 1.3
HOXA10-202ENST00000396344 PRKRIP1Q9H875 184 aaPredicted RBP23.16■■□□□ 1.3
HOXA10-202ENST00000396344 COL16A1Q07092 1604 aaPredicted RBP23.16■■□□□ 1.3
HOXA10-202ENST00000396344 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
HOXA10-202ENST00000396344 SLC24A1O60721 1099 aa23.14■■□□□ 1.29
HOXA10-202ENST00000396344 TMEM132EQ6IEE7 984 aa23.13■■□□□ 1.29
HOXA10-202ENST00000396344 ILDR2Q71H61 639 aa23.13■■□□□ 1.29
HOXA10-202ENST00000396344 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
HOXA10-202ENST00000396344 CFAP70Q5T0N1 1121 aa23.12■■□□□ 1.29
HOXA10-202ENST00000396344 STK26Q9P289 416 aa23.12■■□□□ 1.29
HOXA10-202ENST00000396344 CDC42BPGQ6DT37 1551 aa23.11■■□□□ 1.29
HOXA10-202ENST00000396344 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
HOXA10-202ENST00000396344 NHSL1Q5SYE7 1610 aa23.09■■□□□ 1.29
HOXA10-202ENST00000396344 TMF1P82094 1093 aa23.09■■□□□ 1.29
HOXA10-202ENST00000396344 SPATA31A6Q5VVP1 1343 aa23.08■■□□□ 1.29
HOXA10-202ENST00000396344 NBPF1Q3BBV0 1214 aa23.08■■□□□ 1.29
HOXA10-202ENST00000396344 POLR3GLQ9BT43 218 aa23.08■■□□□ 1.29
HOXA10-202ENST00000396344 CDCA8Q53HL2 280 aa23.07■■□□□ 1.28
HOXA10-202ENST00000396344 WAPLQ7Z5K2 1190 aa23.07■■□□□ 1.28
HOXA10-202ENST00000396344 DLC1Q96QB1 1528 aa23.07■■□□□ 1.28
HOXA10-202ENST00000396344 ADGRB1O14514 1584 aa23.05■■□□□ 1.28
HOXA10-202ENST00000396344 SHPRHQ149N8 1683 aa23.05■■□□□ 1.28
HOXA10-202ENST00000396344 LRRC59Q96AG4 307 aaKnown RBP23.04■■□□□ 1.28
HOXA10-202ENST00000396344 PLEKHH1Q9ULM0 1364 aa23.04■■□□□ 1.28
HOXA10-202ENST00000396344 TESK2Q96S53 571 aa23.01■■□□□ 1.27
HOXA10-202ENST00000396344 ORAI2Q96SN7 254 aa23.01■■□□□ 1.27
HOXA10-202ENST00000396344 SOCS7O14512 581 aa23■■□□□ 1.27
HOXA10-202ENST00000396344 MRS2Q9HD23 443 aa23■■□□□ 1.27
HOXA10-202ENST00000396344 SOS2Q07890 1332 aaPredicted RBP23■■□□□ 1.27
HOXA10-202ENST00000396344 RALBP1Q15311 655 aa22.99■■□□□ 1.27
HOXA10-202ENST00000396344 PRAM1Q96QH2 718 aa22.98■■□□□ 1.27
HOXA10-202ENST00000396344 RGS17Q9UGC6 210 aaPredicted RBP22.97■■□□□ 1.27
HOXA10-202ENST00000396344 FMN2Q9NZ56 1722 aa22.97■■□□□ 1.27
HOXA10-202ENST00000396344 POGKQ9P215 609 aa22.97■■□□□ 1.27
HOXA10-202ENST00000396344 NPHP3Q7Z494 1330 aa22.96■■□□□ 1.27
HOXA10-202ENST00000396344 ESCO1Q5FWF5 840 aa22.96■■□□□ 1.27
HOXA10-202ENST00000396344 DDX17Q92841 729 aaKnown RBP22.94■■□□□ 1.26
HOXA10-202ENST00000396344 PNPLA6Q8IY17 1366 aa22.94■■□□□ 1.26
HOXA10-202ENST00000396344 SBNO2Q9Y2G9 1366 aa22.94■■□□□ 1.26
HOXA10-202ENST00000396344 LRP6O75581 1613 aa22.94■■□□□ 1.26
HOXA10-202ENST00000396344 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
HOXA10-202ENST00000396344 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
HOXA10-202ENST00000396344 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
HOXA10-202ENST00000396344 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
HOXA10-202ENST00000396344 HNRNPUQ00839 825 aaKnown RBP eCLIP22.91■■□□□ 1.26
HOXA10-202ENST00000396344 ANKARQ7Z5J8 1434 aa22.9■■□□□ 1.26
HOXA10-202ENST00000396344 KIF1AQ12756 1690 aa22.9■■□□□ 1.26
HOXA10-202ENST00000396344 MEX3CQ5U5Q3 659 aaKnown RBP22.89■■□□□ 1.26
HOXA10-202ENST00000396344 MYOM1P52179 1685 aa22.89■■□□□ 1.25
HOXA10-202ENST00000396344 SAFB2Q14151 953 aaKnown RBP eCLIP22.89■■□□□ 1.25
HOXA10-202ENST00000396344 PXDNQ92626 1479 aa22.88■■□□□ 1.25
HOXA10-202ENST00000396344 QRICH2Q9H0J4 1663 aa22.87■■□□□ 1.25
HOXA10-202ENST00000396344 PARD3Q8TEW0 1356 aa22.87■■□□□ 1.25
HOXA10-202ENST00000396344 NUTM2FA1L443 756 aa22.87■■□□□ 1.25
HOXA10-202ENST00000396344 FOXO3O43524 673 aa22.87■■□□□ 1.25
HOXA10-202ENST00000396344 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
HOXA10-202ENST00000396344 POTEAQ6S8J7 498 aa22.85■■□□□ 1.25
HOXA10-202ENST00000396344 PHF8Q9UPP1 1060 aa22.85■■□□□ 1.25
HOXA10-202ENST00000396344 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
HOXA10-202ENST00000396344 NUTM2BA6NNL0 878 aaPredicted RBP22.84■■□□□ 1.25
HOXA10-202ENST00000396344 NUTM2EB1AL46 878 aaPredicted RBP22.84■■□□□ 1.25
HOXA10-202ENST00000396344 NUTM2AQ8IVF1 878 aaPredicted RBP22.84■■□□□ 1.25
HOXA10-202ENST00000396344 ZBED9Q6R2W3 1325 aa22.84■■□□□ 1.25
HOXA10-202ENST00000396344 COL22A1Q8NFW1 1626 aaPredicted RBP22.83■■□□□ 1.25
HOXA10-202ENST00000396344 TMC1Q8TDI8 760 aa22.83■■□□□ 1.25
HOXA10-202ENST00000396344 WASLO00401 505 aaPredicted RBP22.82■■□□□ 1.24
HOXA10-202ENST00000396344 NEFLP07196 543 aa22.82■■□□□ 1.24
HOXA10-202ENST00000396344 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
HOXA10-202ENST00000396344 NLRP13Q86W25 1043 aa22.81■■□□□ 1.24
HOXA10-202ENST00000396344 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
HOXA10-202ENST00000396344 RGPD8O14715 1765 aaPredicted RBP22.81■■□□□ 1.24
HOXA10-202ENST00000396344 TULP4Q9NRJ4 1543 aa22.8■■□□□ 1.24
HOXA10-202ENST00000396344 CENPJQ9HC77 1338 aaPredicted RBP22.8■■□□□ 1.24
HOXA10-202ENST00000396344 PSME1Q06323 249 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms