RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
CCP110-203ENST00000396212 SKAP1Q86WV1 359 aa17.11■□□□□ 0.33
CCP110-203ENST00000396212 AK7Q96M32 723 aa17.11■□□□□ 0.33
CCP110-203ENST00000396212 RUFY1Q96T51 708 aa17.11■□□□□ 0.33
CCP110-203ENST00000396212 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
CCP110-203ENST00000396212 ACBD3Q9H3P7 528 aa17.1■□□□□ 0.33
CCP110-203ENST00000396212 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
CCP110-203ENST00000396212 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.1■□□□□ 0.33
CCP110-203ENST00000396212 HMOX1P09601 288 aa17.1■□□□□ 0.33
CCP110-203ENST00000396212 RABEP1Q15276 862 aa17.1■□□□□ 0.33
CCP110-203ENST00000396212 FIBPO43427 364 aa17.09■□□□□ 0.33
CCP110-203ENST00000396212 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
CCP110-203ENST00000396212 ANKRD20A12PQ8NF67 263 aa17.09■□□□□ 0.33
CCP110-203ENST00000396212 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
CCP110-203ENST00000396212 PRDM10Q9NQV6 1147 aa17.09■□□□□ 0.33
CCP110-203ENST00000396212 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
CCP110-203ENST00000396212 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.33
CCP110-203ENST00000396212 NAT10Q9H0A0 1025 aaKnown RBP17.08■□□□□ 0.33
CCP110-203ENST00000396212 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
CCP110-203ENST00000396212 SMC2O95347 1197 aa17.08■□□□□ 0.32
CCP110-203ENST00000396212 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.32
CCP110-203ENST00000396212 GNAI1P63096 354 aa17.07■□□□□ 0.32
CCP110-203ENST00000396212 TCP11L2Q8N4U5 519 aa17.07■□□□□ 0.32
CCP110-203ENST00000396212 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
CCP110-203ENST00000396212 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
CCP110-203ENST00000396212 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
CCP110-203ENST00000396212 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
CCP110-203ENST00000396212 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
CCP110-203ENST00000396212 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
CCP110-203ENST00000396212 APPP05067 770 aa17.05■□□□□ 0.32
CCP110-203ENST00000396212 MIA2Q96PC5 1412 aa17.05■□□□□ 0.32
CCP110-203ENST00000396212 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
CCP110-203ENST00000396212 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCP110-203ENST00000396212 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
CCP110-203ENST00000396212 NOB1Q9ULX3 412 aaKnown RBP17.05■□□□□ 0.32
CCP110-203ENST00000396212 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
CCP110-203ENST00000396212 H0YHG0 523 aa17.04■□□□□ 0.32
CCP110-203ENST00000396212 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
CCP110-203ENST00000396212 NAP1L1P55209 391 aaKnown RBP17.04■□□□□ 0.32
CCP110-203ENST00000396212 SKIDA1Q1XH10 827 aa17.04■□□□□ 0.32
CCP110-203ENST00000396212 FMNL2Q96PY5 1086 aa17.04■□□□□ 0.32
CCP110-203ENST00000396212 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
CCP110-203ENST00000396212 KDM4AO75164 1064 aa17.04■□□□□ 0.32
CCP110-203ENST00000396212 ERC2O15083 957 aa17.03■□□□□ 0.32
CCP110-203ENST00000396212 CCDC112Q8NEF3 446 aa17.03■□□□□ 0.32
CCP110-203ENST00000396212 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.32
CCP110-203ENST00000396212 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
CCP110-203ENST00000396212 TEFQ10587 303 aa17.02■□□□□ 0.32
CCP110-203ENST00000396212 CAGE1Q8TC20 777 aa17.02■□□□□ 0.32
CCP110-203ENST00000396212 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.32
CCP110-203ENST00000396212 ERICH4A6NGS2 130 aa17.02■□□□□ 0.32
CCP110-203ENST00000396212 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.32
CCP110-203ENST00000396212 LEKR1Q6ZMV7 388 aa17.02■□□□□ 0.32
CCP110-203ENST00000396212 ZSCAN30Q86W11 494 aa17.02■□□□□ 0.32
CCP110-203ENST00000396212 NEXNQ0ZGT2 675 aa17.02■□□□□ 0.31
CCP110-203ENST00000396212 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.31
CCP110-203ENST00000396212 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.31
CCP110-203ENST00000396212 MTHFSP49914 203 aa17.01■□□□□ 0.31
CCP110-203ENST00000396212 NBPF8Q3BBV2 869 aa17.01■□□□□ 0.31
CCP110-203ENST00000396212 RRBP1Q9P2E9 1410 aaKnown RBP17.01■□□□□ 0.31
CCP110-203ENST00000396212 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
CCP110-203ENST00000396212 CALRP27797 417 aaKnown RBP17■□□□□ 0.31
CCP110-203ENST00000396212 TRDNQ13061 729 aa17■□□□□ 0.31
CCP110-203ENST00000396212 MCM2P49736 904 aa17■□□□□ 0.31
CCP110-203ENST00000396212 CBX1P83916 185 aa17■□□□□ 0.31
CCP110-203ENST00000396212 CNTROBQ8N137 903 aa17■□□□□ 0.31
CCP110-203ENST00000396212 GCC1Q96CN9 775 aa17■□□□□ 0.31
CCP110-203ENST00000396212 LRRFIP1Q32MZ4 808 aaKnown RBP16.99■□□□□ 0.31
CCP110-203ENST00000396212 CUX1P39880 1505 aa16.99■□□□□ 0.31
CCP110-203ENST00000396212 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
CCP110-203ENST00000396212 CCDC192P0DO97 292 aa16.99■□□□□ 0.31
CCP110-203ENST00000396212 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
CCP110-203ENST00000396212 PSMA5P28066 241 aa16.99■□□□□ 0.31
CCP110-203ENST00000396212 ERCC4Q92889 916 aaPredicted RBP16.98■□□□□ 0.31
CCP110-203ENST00000396212 VGFO15240 615 aaPredicted RBP16.98■□□□□ 0.31
CCP110-203ENST00000396212 RDXP35241 583 aaKnown RBP16.98■□□□□ 0.31
CCP110-203ENST00000396212 PDCL2Q8N4E4 241 aa16.98■□□□□ 0.31
CCP110-203ENST00000396212 SYCE3A1L190 88 aa16.98■□□□□ 0.31
CCP110-203ENST00000396212 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
CCP110-203ENST00000396212 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
CCP110-203ENST00000396212 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
CCP110-203ENST00000396212 PRM3Q9NNZ6 103 aa16.97■□□□□ 0.31
CCP110-203ENST00000396212 UBE2Q2Q8WVN8 375 aa16.96■□□□□ 0.31
CCP110-203ENST00000396212 TNMDQ9H2S6 317 aa16.96■□□□□ 0.31
CCP110-203ENST00000396212 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
CCP110-203ENST00000396212 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
CCP110-203ENST00000396212 CCP110O43303 1012 aa16.95■□□□□ 0.3
CCP110-203ENST00000396212 CDR1P51861 262 aa16.95■□□□□ 0.3
CCP110-203ENST00000396212 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
CCP110-203ENST00000396212 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
CCP110-203ENST00000396212 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
CCP110-203ENST00000396212 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCP110-203ENST00000396212 AXDND1Q5T1B0 1012 aaPredicted RBP16.95■□□□□ 0.3
CCP110-203ENST00000396212 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
CCP110-203ENST00000396212 C20orf194Q5TEA3 1177 aa16.95■□□□□ 0.3
CCP110-203ENST00000396212 WDR33Q9C0J8 1336 aaKnown RBP16.95■□□□□ 0.3
CCP110-203ENST00000396212 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
CCP110-203ENST00000396212 NBPF1Q3BBV0 1214 aa16.94■□□□□ 0.3
CCP110-203ENST00000396212 RRP12Q5JTH9 1297 aaKnown RBP16.94■□□□□ 0.3
CCP110-203ENST00000396212 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms