RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 SPATA31A6Q5VVP1 1343 aa9.74□□□□□ -0.85
LMO3-205ENST00000396205 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
LMO3-205ENST00000396205 ADGRF5Q8IZF2 1346 aa9.74□□□□□ -0.85
LMO3-205ENST00000396205 ALS2Q96Q42 1657 aa9.73□□□□□ -0.85
LMO3-205ENST00000396205 HSPA1LP34931 641 aa9.73□□□□□ -0.85
LMO3-205ENST00000396205 CDK12Q9NYV4 1490 aaPredicted RBP9.72□□□□□ -0.85
LMO3-205ENST00000396205 CHGAP10645 457 aaKnown RBP9.72□□□□□ -0.85
LMO3-205ENST00000396205 NWD2Q9ULI1 1742 aa9.71□□□□□ -0.85
LMO3-205ENST00000396205 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.86
LMO3-205ENST00000396205 GPRASP1Q5JY77 1395 aa9.7□□□□□ -0.86
LMO3-205ENST00000396205 RGPD8O14715 1765 aaPredicted RBP9.7□□□□□ -0.86
LMO3-205ENST00000396205 ATF3P18847 181 aa9.69□□□□□ -0.86
LMO3-205ENST00000396205 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
LMO3-205ENST00000396205 BRD4O60885 1362 aaPredicted RBP9.69□□□□□ -0.86
LMO3-205ENST00000396205 BRINP3Q76B58 766 aa9.68□□□□□ -0.86
LMO3-205ENST00000396205 LRP6O75581 1613 aa9.68□□□□□ -0.86
LMO3-205ENST00000396205 SBNO2Q9Y2G9 1366 aa9.68□□□□□ -0.86
LMO3-205ENST00000396205 FOXD1Q16676 465 aa9.67□□□□□ -0.86
LMO3-205ENST00000396205 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
LMO3-205ENST00000396205 AKAP12Q02952 1782 aa9.67□□□□□ -0.86
LMO3-205ENST00000396205 ATP7BP35670 1465 aa9.67□□□□□ -0.86
LMO3-205ENST00000396205 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
LMO3-205ENST00000396205 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
LMO3-205ENST00000396205 BCANQ96GW7 911 aa9.66□□□□□ -0.86
LMO3-205ENST00000396205 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
LMO3-205ENST00000396205 NRKQ7Z2Y5 1582 aa9.66□□□□□ -0.86
LMO3-205ENST00000396205 NRAPQ86VF7 1730 aa9.65□□□□□ -0.86
LMO3-205ENST00000396205 ABCC6O95255 1503 aa9.65□□□□□ -0.87
LMO3-205ENST00000396205 PHRF1Q9P1Y6 1649 aaKnown RBP9.65□□□□□ -0.87
LMO3-205ENST00000396205 NUTM2DQ5VT03 806 aaPredicted RBP9.64□□□□□ -0.87
LMO3-205ENST00000396205 PLCH1Q4KWH8 1693 aa9.64□□□□□ -0.87
LMO3-205ENST00000396205 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
LMO3-205ENST00000396205 MON2Q7Z3U7 1717 aa9.63□□□□□ -0.87
LMO3-205ENST00000396205 PLEKHH1Q9ULM0 1364 aa9.63□□□□□ -0.87
LMO3-205ENST00000396205 NPHP3Q7Z494 1330 aa9.63□□□□□ -0.87
LMO3-205ENST00000396205 COL14A1Q05707 1796 aaKnown RBP9.63□□□□□ -0.87
LMO3-205ENST00000396205 POLR3AO14802 1390 aaPredicted RBP9.63□□□□□ -0.87
LMO3-205ENST00000396205 TNS3Q68CZ2 1445 aa9.62□□□□□ -0.87
LMO3-205ENST00000396205 LRRC59Q96AG4 307 aaKnown RBP9.62□□□□□ -0.87
LMO3-205ENST00000396205 DISP3Q9P2K9 1392 aa9.62□□□□□ -0.87
LMO3-205ENST00000396205 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
LMO3-205ENST00000396205 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
LMO3-205ENST00000396205 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
LMO3-205ENST00000396205 ARHGEF10O15013 1369 aa9.6□□□□□ -0.87
LMO3-205ENST00000396205 PUS7Q96PZ0 661 aaKnown RBP9.6□□□□□ -0.87
LMO3-205ENST00000396205 RGL3Q3MIN7 710 aa9.59□□□□□ -0.88
LMO3-205ENST00000396205 SLIT2O94813 1529 aa9.58□□□□□ -0.88
LMO3-205ENST00000396205 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
LMO3-205ENST00000396205 LMO7Q8WWI1 1683 aa9.58□□□□□ -0.88
LMO3-205ENST00000396205 SLIT3O75094 1523 aa9.58□□□□□ -0.88
LMO3-205ENST00000396205 ATRNO75882 1429 aa9.58□□□□□ -0.88
LMO3-205ENST00000396205 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
LMO3-205ENST00000396205 SOCS7O14512 581 aa9.57□□□□□ -0.88
LMO3-205ENST00000396205 WNK3Q9BYP7 1800 aa9.57□□□□□ -0.88
LMO3-205ENST00000396205 SPATA31A3Q5VYP0 1347 aa9.57□□□□□ -0.88
LMO3-205ENST00000396205 RGS17Q9UGC6 210 aaPredicted RBP9.57□□□□□ -0.88
LMO3-205ENST00000396205 SSH2Q76I76 1423 aa9.56□□□□□ -0.88
LMO3-205ENST00000396205 ZNF772Q68DY9 489 aaPredicted RBP9.56□□□□□ -0.88
LMO3-205ENST00000396205 SCAF1Q9H7N4 1312 aaKnown RBP9.56□□□□□ -0.88
LMO3-205ENST00000396205 WASLO00401 505 aaPredicted RBP9.56□□□□□ -0.88
LMO3-205ENST00000396205 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
LMO3-205ENST00000396205 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
LMO3-205ENST00000396205 NINLQ9Y2I6 1382 aa9.55□□□□□ -0.88
LMO3-205ENST00000396205 THSD7AQ9UPZ6 1657 aa9.55□□□□□ -0.88
LMO3-205ENST00000396205 TMEM132EQ6IEE7 984 aa9.55□□□□□ -0.88
LMO3-205ENST00000396205 PLEKHG3A1L390 1219 aa9.55□□□□□ -0.88
LMO3-205ENST00000396205 PIK3C2AO00443 1686 aa9.54□□□□□ -0.88
LMO3-205ENST00000396205 WAPLQ7Z5K2 1190 aa9.54□□□□□ -0.88
LMO3-205ENST00000396205 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
LMO3-205ENST00000396205 RBM33Q96EV2 1170 aaKnown RBP9.54□□□□□ -0.88
LMO3-205ENST00000396205 PSME1Q06323 249 aa9.54□□□□□ -0.88
LMO3-205ENST00000396205 FAM208AQ9UK61 1670 aaKnown RBP9.53□□□□□ -0.88
LMO3-205ENST00000396205 L3MBTL2Q969R5 705 aa9.53□□□□□ -0.88
LMO3-205ENST00000396205 COL18A1P39060 1754 aa9.52□□□□□ -0.88
LMO3-205ENST00000396205 ORAI2Q96SN7 254 aa9.52□□□□□ -0.88
LMO3-205ENST00000396205 PHF8Q9UPP1 1060 aa9.52□□□□□ -0.88
LMO3-205ENST00000396205 CPSF1Q10570 1443 aaKnown RBP9.52□□□□□ -0.89
LMO3-205ENST00000396205 PRR36Q9H6K5 1346 aa9.52□□□□□ -0.89
LMO3-205ENST00000396205 CENPJQ9HC77 1338 aaPredicted RBP9.52□□□□□ -0.89
LMO3-205ENST00000396205 GLI3P10071 1580 aa9.52□□□□□ -0.89
LMO3-205ENST00000396205 BCL9LQ86UU0 1499 aa9.52□□□□□ -0.89
LMO3-205ENST00000396205 ILDR2Q71H61 639 aa9.52□□□□□ -0.89
LMO3-205ENST00000396205 RGPD3A6NKT7 1758 aaPredicted RBP9.51□□□□□ -0.89
LMO3-205ENST00000396205 RGPD4Q7Z3J3 1758 aa9.51□□□□□ -0.89
LMO3-205ENST00000396205 CPDO75976 1380 aa9.51□□□□□ -0.89
LMO3-205ENST00000396205 ATAD2Q6PL18 1390 aa9.51□□□□□ -0.89
LMO3-205ENST00000396205 MYOM1P52179 1685 aa9.51□□□□□ -0.89
LMO3-205ENST00000396205 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
LMO3-205ENST00000396205 USP19O94966 1318 aa9.51□□□□□ -0.89
LMO3-205ENST00000396205 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
LMO3-205ENST00000396205 POGKQ9P215 609 aa9.5□□□□□ -0.89
LMO3-205ENST00000396205 ANKRD26Q9UPS8 1709 aa9.5□□□□□ -0.89
LMO3-205ENST00000396205 USP6P35125 1406 aa9.5□□□□□ -0.89
LMO3-205ENST00000396205 ESCO1Q5FWF5 840 aa9.49□□□□□ -0.89
LMO3-205ENST00000396205 PHF23Q9BUL5 403 aaPredicted RBP9.49□□□□□ -0.89
LMO3-205ENST00000396205 STK26Q9P289 416 aa9.49□□□□□ -0.89
LMO3-205ENST00000396205 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
LMO3-205ENST00000396205 TONSLQ96HA7 1378 aa9.49□□□□□ -0.89
LMO3-205ENST00000396205 PPIP5K1Q6PFW1 1433 aa9.48□□□□□ -0.89
LMO3-205ENST00000396205 NFAT5O94916 1531 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms