RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
CLIC1-209ENST00000395892 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
CLIC1-209ENST00000395892 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.52
CLIC1-209ENST00000395892 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
CLIC1-209ENST00000395892 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
CLIC1-209ENST00000395892 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
CLIC1-209ENST00000395892 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
CLIC1-209ENST00000395892 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
CLIC1-209ENST00000395892 CNGB1Q14028 1251 aaPredicted RBP18.31■□□□□ 0.52
CLIC1-209ENST00000395892 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
CLIC1-209ENST00000395892 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLIC1-209ENST00000395892 WAPLQ7Z5K2 1190 aa18.29■□□□□ 0.52
CLIC1-209ENST00000395892 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
CLIC1-209ENST00000395892 POGKQ9P215 609 aa18.29■□□□□ 0.52
CLIC1-209ENST00000395892 TECPR2O15040 1411 aa18.29■□□□□ 0.52
CLIC1-209ENST00000395892 PLEKHH1Q9ULM0 1364 aa18.29■□□□□ 0.52
CLIC1-209ENST00000395892 CC2D1BQ5T0F9 858 aaKnown RBP18.28■□□□□ 0.52
CLIC1-209ENST00000395892 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
CLIC1-209ENST00000395892 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
CLIC1-209ENST00000395892 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
CLIC1-209ENST00000395892 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
CLIC1-209ENST00000395892 BRD4O60885 1362 aaPredicted RBP18.28■□□□□ 0.52
CLIC1-209ENST00000395892 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.52
CLIC1-209ENST00000395892 SETD1BQ9UPS6 1966 aaKnown RBP18.27■□□□□ 0.52
CLIC1-209ENST00000395892 MINK1Q8N4C8 1332 aaPredicted RBP18.26■□□□□ 0.51
CLIC1-209ENST00000395892 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
CLIC1-209ENST00000395892 TBX22Q9Y458 520 aa18.26■□□□□ 0.51
CLIC1-209ENST00000395892 FAM135BQ49AJ0 1406 aa18.25■□□□□ 0.51
CLIC1-209ENST00000395892 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
CLIC1-209ENST00000395892 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
CLIC1-209ENST00000395892 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
CLIC1-209ENST00000395892 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
CLIC1-209ENST00000395892 BCANQ96GW7 911 aa18.23■□□□□ 0.51
CLIC1-209ENST00000395892 CPS1P31327 1500 aa18.23■□□□□ 0.51
CLIC1-209ENST00000395892 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
CLIC1-209ENST00000395892 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
CLIC1-209ENST00000395892 SLC26A8Q96RN1 970 aa18.21■□□□□ 0.51
CLIC1-209ENST00000395892 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
CLIC1-209ENST00000395892 ROBO2Q9HCK4 1378 aa18.2■□□□□ 0.5
CLIC1-209ENST00000395892 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
CLIC1-209ENST00000395892 ANKRD36BQ8N2N9 1353 aa18.19■□□□□ 0.5
CLIC1-209ENST00000395892 SRPK2P78362 688 aaKnown RBP18.19■□□□□ 0.5
CLIC1-209ENST00000395892 ATAD2Q6PL18 1390 aa18.18■□□□□ 0.5
CLIC1-209ENST00000395892 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
CLIC1-209ENST00000395892 CD163L1Q9NR16 1453 aa18.18■□□□□ 0.5
CLIC1-209ENST00000395892 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
CLIC1-209ENST00000395892 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
CLIC1-209ENST00000395892 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLIC1-209ENST00000395892 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
CLIC1-209ENST00000395892 DIP2AQ14689 1571 aa18.17■□□□□ 0.5
CLIC1-209ENST00000395892 USP32Q8NFA0 1604 aa18.16■□□□□ 0.5
CLIC1-209ENST00000395892 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
CLIC1-209ENST00000395892 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
CLIC1-209ENST00000395892 ANKLE2Q86XL3 938 aa18.15■□□□□ 0.5
CLIC1-209ENST00000395892 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
CLIC1-209ENST00000395892 CABP1Q9NZU7 370 aa18.13■□□□□ 0.49
CLIC1-209ENST00000395892 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
CLIC1-209ENST00000395892 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
CLIC1-209ENST00000395892 GTF3C3Q9Y5Q9 886 aa18.11■□□□□ 0.49
CLIC1-209ENST00000395892 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
CLIC1-209ENST00000395892 ADGRB2O60241 1585 aa18.1■□□□□ 0.49
CLIC1-209ENST00000395892 INSRP06213 1382 aa18.1■□□□□ 0.49
CLIC1-209ENST00000395892 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
CLIC1-209ENST00000395892 NUDT16Q96DE0 195 aaKnown RBP18.09■□□□□ 0.49
CLIC1-209ENST00000395892 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
CLIC1-209ENST00000395892 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.49
CLIC1-209ENST00000395892 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
CLIC1-209ENST00000395892 PRR36Q9H6K5 1346 aa18.08■□□□□ 0.49
CLIC1-209ENST00000395892 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
CLIC1-209ENST00000395892 NSD2O96028 1365 aa18.07■□□□□ 0.48
CLIC1-209ENST00000395892 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
CLIC1-209ENST00000395892 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
CLIC1-209ENST00000395892 ATP7BP35670 1465 aa18.07■□□□□ 0.48
CLIC1-209ENST00000395892 FYB1O15117 783 aa18.06■□□□□ 0.48
CLIC1-209ENST00000395892 HDGFL2Q7Z4V5 671 aaPredicted RBP18.06■□□□□ 0.48
CLIC1-209ENST00000395892 CCDC61Q9Y6R9 512 aa18.06■□□□□ 0.48
CLIC1-209ENST00000395892 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
CLIC1-209ENST00000395892 KCNA6P17658 529 aa18.05■□□□□ 0.48
CLIC1-209ENST00000395892 PPIP5K1Q6PFW1 1433 aa18.04■□□□□ 0.48
CLIC1-209ENST00000395892 KDM4FA0A1W2PPD8 638 aa18.03■□□□□ 0.48
CLIC1-209ENST00000395892 ADAMTS8Q9UP79 889 aa18.03■□□□□ 0.48
CLIC1-209ENST00000395892 NPHP4O75161 1426 aaPredicted RBP18.03■□□□□ 0.48
CLIC1-209ENST00000395892 POLR3AO14802 1390 aaPredicted RBP18.03■□□□□ 0.48
CLIC1-209ENST00000395892 PLEKHG3A1L390 1219 aa18.02■□□□□ 0.48
CLIC1-209ENST00000395892 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.48
CLIC1-209ENST00000395892 CDC42BPGQ6DT37 1551 aa18■□□□□ 0.47
CLIC1-209ENST00000395892 GGNBP2Q9H3C7 697 aa18■□□□□ 0.47
CLIC1-209ENST00000395892 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
CLIC1-209ENST00000395892 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
CLIC1-209ENST00000395892 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
CLIC1-209ENST00000395892 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
CLIC1-209ENST00000395892 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
CLIC1-209ENST00000395892 TNNT2P45379 298 aaPredicted RBP17.97■□□□□ 0.47
CLIC1-209ENST00000395892 MTHFSP49914 203 aa17.97■□□□□ 0.47
CLIC1-209ENST00000395892 MON2Q7Z3U7 1717 aa17.97■□□□□ 0.47
CLIC1-209ENST00000395892 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
CLIC1-209ENST00000395892 KIF20BQ96Q89 1820 aa17.96■□□□□ 0.47
CLIC1-209ENST00000395892 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
CLIC1-209ENST00000395892 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
CLIC1-209ENST00000395892 SSH2Q76I76 1423 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms