RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 CREBRFQ8IUR6 639 aa20.47■□□□□ 0.87
SREBF1-203ENST00000395751 CCDC94Q9BW85 323 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-203ENST00000395751 SPDYE4A6NLX3 237 aa20.47■□□□□ 0.87
SREBF1-203ENST00000395751 FIBPO43427 364 aa20.47■□□□□ 0.87
SREBF1-203ENST00000395751 NPM1P06748 294 aaKnown RBP eCLIP20.47■□□□□ 0.87
SREBF1-203ENST00000395751 RNF20Q5VTR2 975 aa20.47■□□□□ 0.87
SREBF1-203ENST00000395751 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
SREBF1-203ENST00000395751 GCC1Q96CN9 775 aa20.46■□□□□ 0.87
SREBF1-203ENST00000395751 SPAG9O60271 1321 aaKnown RBP20.46■□□□□ 0.87
SREBF1-203ENST00000395751 WDR33Q9C0J8 1336 aaKnown RBP20.45■□□□□ 0.86
SREBF1-203ENST00000395751 TERF2IPQ9NYB0 399 aa20.45■□□□□ 0.86
SREBF1-203ENST00000395751 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
SREBF1-203ENST00000395751 DNAJC2Q99543 621 aaKnown RBP20.45■□□□□ 0.86
SREBF1-203ENST00000395751 KLHL40Q2TBA0 621 aa20.45■□□□□ 0.86
SREBF1-203ENST00000395751 RUFY1Q96T51 708 aa20.44■□□□□ 0.86
SREBF1-203ENST00000395751 ROCK1Q13464 1354 aa20.44■□□□□ 0.86
SREBF1-203ENST00000395751 TBC1D32Q96NH3 1257 aa20.44■□□□□ 0.86
SREBF1-203ENST00000395751 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
SREBF1-203ENST00000395751 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
SREBF1-203ENST00000395751 DHX8Q14562 1220 aaKnown RBP20.43■□□□□ 0.86
SREBF1-203ENST00000395751 HS1BP3Q53T59 392 aa20.43■□□□□ 0.86
SREBF1-203ENST00000395751 IPO7O95373 1038 aaKnown RBP20.42■□□□□ 0.86
SREBF1-203ENST00000395751 CCDC27Q2M243 656 aa20.42■□□□□ 0.86
SREBF1-203ENST00000395751 KIF20AO95235 890 aa20.42■□□□□ 0.86
SREBF1-203ENST00000395751 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-203ENST00000395751 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
SREBF1-203ENST00000395751 ZKSCAN5Q9Y2L8 839 aa20.41■□□□□ 0.86
SREBF1-203ENST00000395751 SSFA2P28290 1259 aa20.41■□□□□ 0.86
SREBF1-203ENST00000395751 RIPK4P57078 832 aa20.41■□□□□ 0.86
SREBF1-203ENST00000395751 MVPQ14764 893 aaKnown RBP20.41■□□□□ 0.86
SREBF1-203ENST00000395751 MYOM3Q5VTT5 1437 aa20.4■□□□□ 0.86
SREBF1-203ENST00000395751 SDF4Q9BRK5 362 aa20.4■□□□□ 0.86
SREBF1-203ENST00000395751 UBXN4Q92575 508 aa20.4■□□□□ 0.86
SREBF1-203ENST00000395751 TMCO3Q6UWJ1 677 aa20.39■□□□□ 0.86
SREBF1-203ENST00000395751 PATL2C9JE40 543 aaKnown RBP20.39■□□□□ 0.85
SREBF1-203ENST00000395751 FBXW7Q969H0 707 aa20.39■□□□□ 0.85
SREBF1-203ENST00000395751 EIF3JO75822 258 aaKnown RBP20.39■□□□□ 0.85
SREBF1-203ENST00000395751 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
SREBF1-203ENST00000395751 KIF2AO00139 706 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-203ENST00000395751 PDCP20941 246 aa20.38■□□□□ 0.85
SREBF1-203ENST00000395751 TULP1O00294 542 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-203ENST00000395751 PES1O00541 588 aaKnown RBP20.38■□□□□ 0.85
SREBF1-203ENST00000395751 CHD1LQ86WJ1 897 aa20.37■□□□□ 0.85
SREBF1-203ENST00000395751 TERF1P54274 439 aa20.37■□□□□ 0.85
SREBF1-203ENST00000395751 IRX3P78415 501 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-203ENST00000395751 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
SREBF1-203ENST00000395751 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
SREBF1-203ENST00000395751 STK26Q9P289 416 aa20.36■□□□□ 0.85
SREBF1-203ENST00000395751 BAG4O95429 457 aaKnown RBP20.36■□□□□ 0.85
SREBF1-203ENST00000395751 PTPN14Q15678 1187 aa20.36■□□□□ 0.85
SREBF1-203ENST00000395751 TNMDQ9H2S6 317 aa20.36■□□□□ 0.85
SREBF1-203ENST00000395751 HSP90AB3PQ58FF7 597 aa20.35■□□□□ 0.85
SREBF1-203ENST00000395751 USP25Q9UHP3 1055 aa20.35■□□□□ 0.85
SREBF1-203ENST00000395751 ERLIN1O75477 346 aa20.35■□□□□ 0.85
SREBF1-203ENST00000395751 SMC2O95347 1197 aa20.35■□□□□ 0.85
SREBF1-203ENST00000395751 SOX12O15370 315 aa20.35■□□□□ 0.85
SREBF1-203ENST00000395751 KINO60870 393 aaKnown RBP20.35■□□□□ 0.85
SREBF1-203ENST00000395751 GTF2F1P35269 517 aaKnown RBP eCLIP20.34■□□□□ 0.851e-8■■■■■ 169.5
SREBF1-203ENST00000395751 RSPH4AQ5TD94 716 aa20.34■□□□□ 0.85
SREBF1-203ENST00000395751 KRT222Q8N1A0 295 aa20.34■□□□□ 0.85
SREBF1-203ENST00000395751 KIF18AQ8NI77 898 aa20.34■□□□□ 0.85
SREBF1-203ENST00000395751 ERC2O15083 957 aa20.34■□□□□ 0.85
SREBF1-203ENST00000395751 CDR1P51861 262 aa20.34■□□□□ 0.85
SREBF1-203ENST00000395751 TNNT1P13805 278 aa20.33■□□□□ 0.85
SREBF1-203ENST00000395751 HOOK1Q9UJC3 728 aaKnown RBP20.33■□□□□ 0.85
SREBF1-203ENST00000395751 AXDND1Q5T1B0 1012 aaPredicted RBP20.33■□□□□ 0.84
SREBF1-203ENST00000395751 HFM1A2PYH4 1435 aa20.33■□□□□ 0.84
SREBF1-203ENST00000395751 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.84
SREBF1-203ENST00000395751 SKIDA1Q1XH10 827 aa20.33■□□□□ 0.84
SREBF1-203ENST00000395751 CCDC191Q8NCU4 936 aa20.33■□□□□ 0.84
SREBF1-203ENST00000395751 ANKRD20A12PQ8NF67 263 aa20.33■□□□□ 0.84
SREBF1-203ENST00000395751 KIAA0754O94854 1291 aa20.32■□□□□ 0.84
SREBF1-203ENST00000395751 NOLC1Q14978 699 aaKnown RBP eCLIP20.32■□□□□ 0.84
SREBF1-203ENST00000395751 EXOSC9Q06265 439 aaKnown RBP20.32■□□□□ 0.84
SREBF1-203ENST00000395751 PDILTQ8N807 584 aa20.32■□□□□ 0.84
SREBF1-203ENST00000395751 NOL10Q9BSC4 688 aaKnown RBP20.32■□□□□ 0.84
SREBF1-203ENST00000395751 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
SREBF1-203ENST00000395751 FILIP1Q7Z7B0 1213 aa20.31■□□□□ 0.84
SREBF1-203ENST00000395751 KRT85P78386 507 aa20.31■□□□□ 0.84
SREBF1-203ENST00000395751 ZSCAN23Q3MJ62 389 aa20.31■□□□□ 0.84
SREBF1-203ENST00000395751 PDIA4P13667 645 aaKnown RBP20.3■□□□□ 0.84
SREBF1-203ENST00000395751 CCDC183Q5T5S1 534 aa20.3■□□□□ 0.84
SREBF1-203ENST00000395751 GNAI1P63096 354 aa20.3■□□□□ 0.84
SREBF1-203ENST00000395751 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
SREBF1-203ENST00000395751 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
SREBF1-203ENST00000395751 NUP62CLQ9H1M0 184 aa20.3■□□□□ 0.84
SREBF1-203ENST00000395751 TRAK1Q9UPV9 953 aa20.3■□□□□ 0.84
SREBF1-203ENST00000395751 BMS1Q14692 1282 aaKnown RBP20.29■□□□□ 0.84
SREBF1-203ENST00000395751 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
SREBF1-203ENST00000395751 C16orf45Q96MC5 204 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-203ENST00000395751 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.848e-8■■□□□ 12.4
SREBF1-203ENST00000395751 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
SREBF1-203ENST00000395751 PLCD3Q8N3E9 789 aa20.29■□□□□ 0.84
SREBF1-203ENST00000395751 FMNL2Q96PY5 1086 aa20.29■□□□□ 0.84
SREBF1-203ENST00000395751 DIAPH1O60610 1272 aaKnown RBP20.29■□□□□ 0.84
SREBF1-203ENST00000395751 CUX1P39880 1505 aa20.28■□□□□ 0.84
SREBF1-203ENST00000395751 NCOA1Q15788 1441 aa20.28■□□□□ 0.84
SREBF1-203ENST00000395751 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
SREBF1-203ENST00000395751 ADCY5O95622 1261 aa20.28■□□□□ 0.84
SREBF1-203ENST00000395751 CPLX2Q6PUV4 134 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms