RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
AP3S1-202ENST00000395548 DDX11L8A8MPP1 907 aa10.43□□□□□ -0.74
AP3S1-202ENST00000395548 BLOC1S3Q6QNY0 202 aa10.42□□□□□ -0.74
AP3S1-202ENST00000395548 NLRP7Q8WX94 980 aa10.42□□□□□ -0.74
AP3S1-202ENST00000395548 DNMBPQ6XZF7 1577 aa10.42□□□□□ -0.74
AP3S1-202ENST00000395548 GGCXP38435 758 aa10.41□□□□□ -0.74
AP3S1-202ENST00000395548 WDR97A6NE52 1622 aa10.4□□□□□ -0.74
AP3S1-202ENST00000395548 NR1I2O75469 434 aa10.4□□□□□ -0.74
AP3S1-202ENST00000395548 DIP2BQ9P265 1576 aa10.39□□□□□ -0.75
AP3S1-202ENST00000395548 PPP1R18Q6NYC8 613 aa10.39□□□□□ -0.75
AP3S1-202ENST00000395548 KRI1Q8N9T8 703 aaKnown RBP10.39□□□□□ -0.75
AP3S1-202ENST00000395548 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
AP3S1-202ENST00000395548 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
AP3S1-202ENST00000395548 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.39□□□□□ -0.75
AP3S1-202ENST00000395548 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
AP3S1-202ENST00000395548 MAPKBP1O60336 1514 aa10.38□□□□□ -0.75
AP3S1-202ENST00000395548 GRIN2BQ13224 1484 aa10.38□□□□□ -0.75
AP3S1-202ENST00000395548 POLA1P09884 1462 aaPredicted RBP10.37□□□□□ -0.75
AP3S1-202ENST00000395548 TOP2BQ02880 1626 aa10.37□□□□□ -0.75
AP3S1-202ENST00000395548 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
AP3S1-202ENST00000395548 SOGA1O94964 1423 aa10.36□□□□□ -0.75
AP3S1-202ENST00000395548 GCGRP47871 477 aa10.36□□□□□ -0.75
AP3S1-202ENST00000395548 BARGINQ6ZT62 677 aa10.36□□□□□ -0.75
AP3S1-202ENST00000395548 ZMYND10O75800 440 aa10.35□□□□□ -0.75
AP3S1-202ENST00000395548 MDM2Q00987 491 aaPredicted RBP10.35□□□□□ -0.75
AP3S1-202ENST00000395548 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
AP3S1-202ENST00000395548 WIZO95785 1651 aa10.34□□□□□ -0.75
AP3S1-202ENST00000395548 ATP6V1AP38606 617 aa10.34□□□□□ -0.75
AP3S1-202ENST00000395548 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
AP3S1-202ENST00000395548 CLCN1P35523 988 aa10.33□□□□□ -0.76
AP3S1-202ENST00000395548 PUS10Q3MIT2 529 aaKnown RBP10.33□□□□□ -0.76
AP3S1-202ENST00000395548 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
AP3S1-202ENST00000395548 RAD54L2Q9Y4B4 1467 aa10.33□□□□□ -0.76
AP3S1-202ENST00000395548 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
AP3S1-202ENST00000395548 CEP170Q5SW79 1584 aa10.32□□□□□ -0.76
AP3S1-202ENST00000395548 FUT2Q10981 343 aa10.32□□□□□ -0.76
AP3S1-202ENST00000395548 IRX2Q9BZI1 471 aaPredicted RBP10.32□□□□□ -0.76
AP3S1-202ENST00000395548 GPCPD1Q9NPB8 672 aa10.32□□□□□ -0.76
AP3S1-202ENST00000395548 TLL1O43897 1013 aa10.31□□□□□ -0.76
AP3S1-202ENST00000395548 ADH1BP00325 375 aa10.31□□□□□ -0.76
AP3S1-202ENST00000395548 CD46P15529 392 aa10.31□□□□□ -0.76
AP3S1-202ENST00000395548 MORN1Q5T089 497 aa10.31□□□□□ -0.76
AP3S1-202ENST00000395548 PRKD2Q9BZL6 878 aa10.3□□□□□ -0.76
AP3S1-202ENST00000395548 V9GY48 417 aaPredicted RBP10.3□□□□□ -0.76
AP3S1-202ENST00000395548 SPSB2Q99619 263 aa10.28□□□□□ -0.76
AP3S1-202ENST00000395548 SLC6A16Q9GZN6 736 aa10.27□□□□□ -0.77
AP3S1-202ENST00000395548 RNF223E7ERA6 249 aa10.26□□□□□ -0.77
AP3S1-202ENST00000395548 KDM4AO75164 1064 aa10.26□□□□□ -0.77
AP3S1-202ENST00000395548 FMNL1O95466 1100 aaPredicted RBP10.26□□□□□ -0.77
AP3S1-202ENST00000395548 S1PR4O95977 384 aa10.26□□□□□ -0.77
AP3S1-202ENST00000395548 USP46P62068 366 aa10.26□□□□□ -0.77
AP3S1-202ENST00000395548 SLC27A5Q9Y2P5 690 aa10.26□□□□□ -0.77
AP3S1-202ENST00000395548 SALL2Q9Y467 1007 aaPredicted RBP10.26□□□□□ -0.77
AP3S1-202ENST00000395548 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
AP3S1-202ENST00000395548 FAM217BQ9NTX9 383 aaPredicted RBP10.25□□□□□ -0.77
AP3S1-202ENST00000395548 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
AP3S1-202ENST00000395548 AMHR2Q16671 573 aa10.23□□□□□ -0.77
AP3S1-202ENST00000395548 Q3C1V9 767 aa10.23□□□□□ -0.77
AP3S1-202ENST00000395548 THAP11Q96EK4 314 aa10.23□□□□□ -0.77
AP3S1-202ENST00000395548 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
AP3S1-202ENST00000395548 NUP160Q12769 1436 aa10.22□□□□□ -0.77
AP3S1-202ENST00000395548 PRG4Q92954 1404 aaPredicted RBP10.22□□□□□ -0.77
AP3S1-202ENST00000395548 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
AP3S1-202ENST00000395548 TOP2AP11388 1531 aaKnown RBP10.22□□□□□ -0.77
AP3S1-202ENST00000395548 PPEF1O14829 653 aaPredicted RBP10.21□□□□□ -0.77
AP3S1-202ENST00000395548 SSTR3P32745 418 aaPredicted RBP10.21□□□□□ -0.77
AP3S1-202ENST00000395548 SLC19A1P41440 591 aa10.21□□□□□ -0.77
AP3S1-202ENST00000395548 LAPTM4AQ15012 233 aa10.21□□□□□ -0.77
AP3S1-202ENST00000395548 BRICD5Q6PL45 260 aa10.21□□□□□ -0.77
AP3S1-202ENST00000395548 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
AP3S1-202ENST00000395548 BCANQ96GW7 911 aa10.21□□□□□ -0.77
AP3S1-202ENST00000395548 AK7Q96M32 723 aa10.21□□□□□ -0.77
AP3S1-202ENST00000395548 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
AP3S1-202ENST00000395548 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
AP3S1-202ENST00000395548 COL17A1Q9UMD9 1497 aaPredicted RBP10.18□□□□□ -0.78
AP3S1-202ENST00000395548 TRIM66O15016 1216 aa10.17□□□□□ -0.78
AP3S1-202ENST00000395548 HOXA2O43364 376 aa10.17□□□□□ -0.78
AP3S1-202ENST00000395548 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
AP3S1-202ENST00000395548 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
AP3S1-202ENST00000395548 TEX14Q8IWB6 1497 aa10.17□□□□□ -0.78
AP3S1-202ENST00000395548 GFRA3O60609 400 aa10.16□□□□□ -0.78
AP3S1-202ENST00000395548 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
AP3S1-202ENST00000395548 GIGYF2Q6Y7W6 1299 aaKnown RBP10.16□□□□□ -0.78
AP3S1-202ENST00000395548 PTPRMP28827 1452 aa10.16□□□□□ -0.78
AP3S1-202ENST00000395548 PBRM1Q86U86 1689 aa10.15□□□□□ -0.78
AP3S1-202ENST00000395548 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.78
AP3S1-202ENST00000395548 RNF19BQ6ZMZ0 732 aa10.15□□□□□ -0.78
AP3S1-202ENST00000395548 SPRYD7Q5W111 196 aa10.14□□□□□ -0.79
AP3S1-202ENST00000395548 USB1Q9BQ65 265 aaKnown RBP10.14□□□□□ -0.79
AP3S1-202ENST00000395548 GLI2P10070 1586 aa10.14□□□□□ -0.79
AP3S1-202ENST00000395548 LIAT1Q6ZQX7 453 aa10.13□□□□□ -0.79
AP3S1-202ENST00000395548 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
AP3S1-202ENST00000395548 PPRC1Q5VV67 1664 aaKnown RBP10.12□□□□□ -0.79
AP3S1-202ENST00000395548 PLB1Q6P1J6 1458 aa10.12□□□□□ -0.79
AP3S1-202ENST00000395548 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
AP3S1-202ENST00000395548 Q6ZNB5 142 aa10.12□□□□□ -0.79
AP3S1-202ENST00000395548 PARP9Q8IXQ6 854 aa10.12□□□□□ -0.79
AP3S1-202ENST00000395548 EMID1Q96A84 441 aaPredicted RBP10.12□□□□□ -0.79
AP3S1-202ENST00000395548 PDZRN3Q9UPQ7 1066 aa10.12□□□□□ -0.79
AP3S1-202ENST00000395548 FCF1Q9Y324 198 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms