RNA–Protein interactions for RNA: ENST00000395309.7

KTN1-203, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KTN1, Length 4,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-203ENST00000395309 CHMP4AQ9BY43 222 aa3.48□□□□□ -1.85
KTN1-203ENST00000395309 FAM198AQ9UFP1 575 aa3.48□□□□□ -1.85
KTN1-203ENST00000395309 GIPC2Q8TF65 315 aa3.48□□□□□ -1.85
KTN1-203ENST00000395309 TSC1Q92574 1164 aa3.48□□□□□ -1.85
KTN1-203ENST00000395309 PCDHGC3Q9UN70 934 aa3.48□□□□□ -1.85
KTN1-203ENST00000395309 SLAIN2Q9P270 581 aa3.48□□□□□ -1.85
KTN1-203ENST00000395309 KDM4AO75164 1064 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 SSFA2P28290 1259 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 ARID4AP29374 1257 aaPredicted RBP3.47□□□□□ -1.85
KTN1-203ENST00000395309 FOSBP53539 338 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 DRC1Q96MC2 740 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 NOVA2Q9UNW9 492 aaKnown RBP3.47□□□□□ -1.85
KTN1-203ENST00000395309 SOWAHDA6NJG2 315 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 FDX1P10109 184 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 PLCG2P16885 1265 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 GUCA2AQ02747 115 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 IER5LQ5T953 404 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 CHRDL2Q6WN34 429 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 HLA-CQ95604 372 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 C3orf80F5H4A9 247 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 PIK3CDO00329 1044 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 PPM1GO15355 546 aaPredicted RBP3.47□□□□□ -1.85
KTN1-203ENST00000395309 HOXA2O43364 376 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 SERPINB4P48594 390 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 MARSP56192 900 aaKnown RBP3.47□□□□□ -1.85
KTN1-203ENST00000395309 HELBQ8NG08 1087 aaPredicted RBP3.47□□□□□ -1.85
KTN1-203ENST00000395309 PCDHGA4Q9Y5G9 962 aa3.47□□□□□ -1.85
KTN1-203ENST00000395309 KDM4FA0A1W2PPD8 638 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 SMARCA5O60264 1052 aaPredicted RBP3.46□□□□□ -1.86
KTN1-203ENST00000395309 RDH13Q8NBN7 331 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 ZDHHC16Q969W1 377 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 ADAM33Q9BZ11 813 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 NR6A1Q15406 480 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 ANKRD33BA6NCL7 494 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 CFAP99D6REC4 459 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 SCNN1AP37088 669 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 ZNF454Q8N9F8 522 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 SREK1Q8WXA9 508 aaKnown RBP3.46□□□□□ -1.86
KTN1-203ENST00000395309 C8orf37Q96NL8 207 aa3.46□□□□□ -1.86
KTN1-203ENST00000395309 C19orf67A6NJJ6 358 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 ATMINO43313 823 aaPredicted RBP3.45□□□□□ -1.86
KTN1-203ENST00000395309 DNAJB2P25686 324 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 MYT1Q01538 1121 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 MTMR2Q13614 643 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 NUDT18Q6ZVK8 323 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 NPAS4Q8IUM7 802 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 TMEM134Q9H6X4 195 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 BIN2Q9UBW5 565 aaPredicted RBP3.45□□□□□ -1.86
KTN1-203ENST00000395309 EIF4G2P78344 907 aaKnown RBP eCLIP3.45□□□□□ -1.86
KTN1-203ENST00000395309 TAGLNQ01995 201 aaKnown RBP3.45□□□□□ -1.86
KTN1-203ENST00000395309 FAM69CQ0P6D2 419 aa3.45□□□□□ -1.86
KTN1-203ENST00000395309 PPP1R1BQ9UD71 204 aaPredicted RBP3.45□□□□□ -1.86
KTN1-203ENST00000395309 USP17L3A6NCW0 530 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 USP17L4A6NCW7 530 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 CRTC2Q53ET0 693 aaPredicted RBP3.44□□□□□ -1.86
KTN1-203ENST00000395309 USP17L2Q6R6M4 530 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 USP17L1Q7RTZ2 530 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 TSKSQ9UJT2 592 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 GCGRP47871 477 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 USP46P62068 366 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 SLF2Q8IX21 1173 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 DEPDC4Q8N2C3 294 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 SPATA32Q96LK8 384 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 COL9A1P20849 921 aa3.44□□□□□ -1.86
KTN1-203ENST00000395309 ZNF326Q5BKZ1 582 aaKnown RBP3.44□□□□□ -1.86
KTN1-203ENST00000395309 USP17L15C9J2P7 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L10C9JJH3 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L13C9JLJ4 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L12C9JPN9 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L11C9JVI0 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L21D6R901 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L18D6R9N7 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L22D6RA61 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L17D6RBQ6 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L19D6RCP7 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L20D6RJB6 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 ZC3H6P61129 1189 aaKnown RBP3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L24Q0WX57 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 ASTLQ6HA08 431 aaPredicted RBP3.43□□□□□ -1.86
KTN1-203ENST00000395309 PNMA1Q8ND90 353 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 FAM196BA6NMK8 535 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 SKIP12755 728 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 VAMP1P23763 118 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 CLP1Q92989 425 aaKnown RBP3.43□□□□□ -1.86
KTN1-203ENST00000395309 COLQQ9Y215 455 aaPredicted RBP3.43□□□□□ -1.86
KTN1-203ENST00000395309 USP17L5A8MUK1 530 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 PER1O15534 1290 aaPredicted RBP3.43□□□□□ -1.86
KTN1-203ENST00000395309 ATP2B4P23634 1241 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 CANXP27824 592 aaKnown RBP3.43□□□□□ -1.86
KTN1-203ENST00000395309 MKRN1Q9UHC7 482 aaKnown RBP3.43□□□□□ -1.86
KTN1-203ENST00000395309 PNMA3Q9UL41 463 aa3.43□□□□□ -1.86
KTN1-203ENST00000395309 C6orf229H3BNL8 230 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 RECKO95980 971 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 C7P10643 843 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 PTK7Q13308 1070 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 NAALADL2Q58DX5 795 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 FAM200AQ8TCP9 573 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 TATDN2Q93075 761 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 NFATC2IPQ8NCF5 419 aa3.42□□□□□ -1.86
KTN1-203ENST00000395309 FAM174AQ8TBP5 190 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms