RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 GRPEL1Q9HAV7 217 aa20.73■□□□□ 0.91
EFEMP1-202ENST00000394555 GLIPR1L2Q4G1C9 344 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 DZIP1LQ8IYY4 767 aaKnown RBP20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 SLC12A5Q9H2X9 1139 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 MTHFSP49914 203 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 HSP90AA2PQ14568 343 aaPredicted RBP20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 ZKSCAN2Q63HK3 967 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 ADGRF5Q8IZF2 1346 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
EFEMP1-202ENST00000394555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
EFEMP1-202ENST00000394555 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
EFEMP1-202ENST00000394555 VSIG10Q8N0Z9 540 aa20.7■□□□□ 0.9
EFEMP1-202ENST00000394555 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
EFEMP1-202ENST00000394555 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
EFEMP1-202ENST00000394555 AFAP1Q8N556 730 aa20.7■□□□□ 0.9
EFEMP1-202ENST00000394555 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
EFEMP1-202ENST00000394555 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
EFEMP1-202ENST00000394555 NSD3Q9BZ95 1437 aa20.69■□□□□ 0.9
EFEMP1-202ENST00000394555 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
EFEMP1-202ENST00000394555 EFCAB2Q5VUJ9 269 aa20.68■□□□□ 0.9
EFEMP1-202ENST00000394555 TRIM44Q96DX7 344 aaPredicted RBP20.68■□□□□ 0.9
EFEMP1-202ENST00000394555 FOXD4L1Q9NU39 408 aa20.68■□□□□ 0.9
EFEMP1-202ENST00000394555 ESPNB1AK53 854 aa20.67■□□□□ 0.9
EFEMP1-202ENST00000394555 TRAK1Q9UPV9 953 aa20.67■□□□□ 0.9
EFEMP1-202ENST00000394555 ZMYM3Q14202 1370 aa20.67■□□□□ 0.9
EFEMP1-202ENST00000394555 SPAG9O60271 1321 aaKnown RBP20.67■□□□□ 0.9
EFEMP1-202ENST00000394555 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
EFEMP1-202ENST00000394555 CEP152O94986 1710 aa20.66■□□□□ 0.9
EFEMP1-202ENST00000394555 SLC24A1O60721 1099 aa20.66■□□□□ 0.9
EFEMP1-202ENST00000394555 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
EFEMP1-202ENST00000394555 CHGAP10645 457 aaKnown RBP20.66■□□□□ 0.9
EFEMP1-202ENST00000394555 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
EFEMP1-202ENST00000394555 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
EFEMP1-202ENST00000394555 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
EFEMP1-202ENST00000394555 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
EFEMP1-202ENST00000394555 TRIM27P14373 513 aa20.64■□□□□ 0.9
EFEMP1-202ENST00000394555 TNPO1Q92973 898 aaKnown RBP20.64■□□□□ 0.9
EFEMP1-202ENST00000394555 CLTCL1P53675 1640 aa20.64■□□□□ 0.9
EFEMP1-202ENST00000394555 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
EFEMP1-202ENST00000394555 EXOSC9Q06265 439 aaKnown RBP20.64■□□□□ 0.89
EFEMP1-202ENST00000394555 ZNF692Q9BU19 519 aaPredicted RBP20.64■□□□□ 0.89
EFEMP1-202ENST00000394555 TRPM2O94759 1503 aa20.63■□□□□ 0.89
EFEMP1-202ENST00000394555 GAS2L3Q86XJ1 694 aa20.63■□□□□ 0.89
EFEMP1-202ENST00000394555 PKNOX2Q96KN3 472 aa20.63■□□□□ 0.89
EFEMP1-202ENST00000394555 LNPKQ9C0E8 428 aa20.62■□□□□ 0.89
EFEMP1-202ENST00000394555 KIF3BO15066 747 aa20.62■□□□□ 0.89
EFEMP1-202ENST00000394555 SSH1Q8WYL5 1049 aa20.61■□□□□ 0.89
EFEMP1-202ENST00000394555 DDX19BQ9UMR2 479 aa20.6■□□□□ 0.89
EFEMP1-202ENST00000394555 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
EFEMP1-202ENST00000394555 NOB1Q9ULX3 412 aaKnown RBP20.6■□□□□ 0.89
EFEMP1-202ENST00000394555 RRP9O43818 475 aaKnown RBP20.59■□□□□ 0.89
EFEMP1-202ENST00000394555 HDAC1Q13547 482 aaPredicted RBP20.59■□□□□ 0.89
EFEMP1-202ENST00000394555 CCDC27Q2M243 656 aa20.59■□□□□ 0.89
EFEMP1-202ENST00000394555 PTPRTO14522 1441 aa20.59■□□□□ 0.89
EFEMP1-202ENST00000394555 IQSEC2Q5JU85 1478 aa20.59■□□□□ 0.89
EFEMP1-202ENST00000394555 TMEM57Q8N5G2 664 aa20.59■□□□□ 0.89
EFEMP1-202ENST00000394555 ZMYND15Q9H091 742 aa20.59■□□□□ 0.89
EFEMP1-202ENST00000394555 GBP4Q96PP9 640 aa20.58■□□□□ 0.89
EFEMP1-202ENST00000394555 SHPRHQ149N8 1683 aa20.58■□□□□ 0.88
EFEMP1-202ENST00000394555 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.88
EFEMP1-202ENST00000394555 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.88
EFEMP1-202ENST00000394555 UGGT1Q9NYU2 1555 aa20.57■□□□□ 0.88
EFEMP1-202ENST00000394555 KANK1Q14678 1352 aa20.56■□□□□ 0.88
EFEMP1-202ENST00000394555 SMC5Q8IY18 1101 aa20.56■□□□□ 0.88
EFEMP1-202ENST00000394555 PLCH2O75038 1416 aa20.55■□□□□ 0.88
EFEMP1-202ENST00000394555 DDIT3P35638 169 aa20.54■□□□□ 0.88
EFEMP1-202ENST00000394555 RBM25P49756 843 aaKnown RBP20.54■□□□□ 0.88
EFEMP1-202ENST00000394555 ISY1Q9ULR0 285 aaKnown RBP20.53■□□□□ 0.88
EFEMP1-202ENST00000394555 CD2BP2O95400 341 aaKnown RBP20.53■□□□□ 0.88
EFEMP1-202ENST00000394555 ZNF518AQ6AHZ1 1483 aa20.52■□□□□ 0.88
EFEMP1-202ENST00000394555 SNX21Q969T3 373 aa20.52■□□□□ 0.88
EFEMP1-202ENST00000394555 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.88
EFEMP1-202ENST00000394555 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
EFEMP1-202ENST00000394555 ABCA6Q8N139 1617 aa20.52■□□□□ 0.88
EFEMP1-202ENST00000394555 RAB3GAP1Q15042 981 aa20.52■□□□□ 0.88
EFEMP1-202ENST00000394555 ZBTB40Q9NUA8 1239 aa20.51■□□□□ 0.87
EFEMP1-202ENST00000394555 NUCB1Q02818 461 aa20.51■□□□□ 0.87
EFEMP1-202ENST00000394555 ANKRD45Q5TZF3 282 aa20.51■□□□□ 0.87
EFEMP1-202ENST00000394555 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
EFEMP1-202ENST00000394555 TMPOP42166 694 aaKnown RBP20.5■□□□□ 0.87
EFEMP1-202ENST00000394555 SKOR2Q2VWA4 1001 aaPredicted RBP20.5■□□□□ 0.87
EFEMP1-202ENST00000394555 MAP3K4Q9Y6R4 1608 aa20.49■□□□□ 0.87
EFEMP1-202ENST00000394555 SSFA2P28290 1259 aa20.49■□□□□ 0.87
EFEMP1-202ENST00000394555 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
EFEMP1-202ENST00000394555 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
EFEMP1-202ENST00000394555 CIZ1Q9ULV3 898 aaPredicted RBP20.49■□□□□ 0.87
EFEMP1-202ENST00000394555 CT47B1P0C2W7 299 aaPredicted RBP20.48■□□□□ 0.87
EFEMP1-202ENST00000394555 C1orf115Q9H7X2 142 aa20.48■□□□□ 0.87
EFEMP1-202ENST00000394555 TRIM35Q9UPQ4 493 aa20.48■□□□□ 0.87
EFEMP1-202ENST00000394555 NUTM2DQ5VT03 806 aaPredicted RBP20.48■□□□□ 0.87
EFEMP1-202ENST00000394555 KIAA1210Q9ULL0 1709 aa20.47■□□□□ 0.87
EFEMP1-202ENST00000394555 NOS1P29475 1434 aa20.47■□□□□ 0.87
EFEMP1-202ENST00000394555 NASPP49321 788 aaPredicted RBP20.47■□□□□ 0.87
EFEMP1-202ENST00000394555 KIF2CQ99661 725 aa20.47■□□□□ 0.87
EFEMP1-202ENST00000394555 ABCC1P33527 1531 aa20.47■□□□□ 0.87
EFEMP1-202ENST00000394555 RIPK4P57078 832 aa20.46■□□□□ 0.87
EFEMP1-202ENST00000394555 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms