RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 ASXL1Q8IXJ9 1541 aa31.28■■■□□ 2.6
RARA-203ENST00000394086 LAMC1P11047 1609 aa31.28■■■□□ 2.6
RARA-203ENST00000394086 XRN1Q8IZH2 1706 aaKnown RBP31.28■■■□□ 2.6
RARA-203ENST00000394086 IRX6P78412 446 aaPredicted RBP31.27■■■□□ 2.6
RARA-203ENST00000394086 CCDC184Q52MB2 194 aa31.27■■■□□ 2.6
RARA-203ENST00000394086 NBPF8Q3BBV2 869 aa31.27■■■□□ 2.6
RARA-203ENST00000394086 LRPPRCP42704 1394 aaKnown RBP31.26■■■□□ 2.59
RARA-203ENST00000394086 IQSEC2Q5JU85 1478 aa31.25■■■□□ 2.59
RARA-203ENST00000394086 YTHDC2Q9H6S0 1430 aaKnown RBP31.25■■■□□ 2.59
RARA-203ENST00000394086 C14orf37Q86TY3 774 aa31.25■■■□□ 2.59
RARA-203ENST00000394086 FAM9BQ8IZU0 186 aa31.25■■■□□ 2.59
RARA-203ENST00000394086 ROCK2O75116 1388 aaKnown RBP31.23■■■□□ 2.59
RARA-203ENST00000394086 ROBO2Q9HCK4 1378 aa31.23■■■□□ 2.59
RARA-203ENST00000394086 NBPF1Q3BBV0 1214 aa31.22■■■□□ 2.59
RARA-203ENST00000394086 ABCC11Q96J66 1382 aa31.22■■■□□ 2.59
RARA-203ENST00000394086 RNF123Q5XPI4 1314 aa31.21■■■□□ 2.59
RARA-203ENST00000394086 ADGRB1O14514 1584 aa31.2■■■□□ 2.59
RARA-203ENST00000394086 XIRP1Q702N8 1843 aaKnown RBP31.2■■■□□ 2.58
RARA-203ENST00000394086 PTCH1Q13635 1447 aa31.19■■■□□ 2.58
RARA-203ENST00000394086 UBAP1LF5GYI3 381 aa31.18■■■□□ 2.58
RARA-203ENST00000394086 TRAK1Q9UPV9 953 aa31.18■■■□□ 2.58
RARA-203ENST00000394086 WAPLQ7Z5K2 1190 aa31.17■■■□□ 2.58
RARA-203ENST00000394086 TECPR2O15040 1411 aa31.16■■■□□ 2.58
RARA-203ENST00000394086 NCOA3Q9Y6Q9 1424 aa31.16■■■□□ 2.58
RARA-203ENST00000394086 MSH6P52701 1360 aa31.15■■■□□ 2.58
RARA-203ENST00000394086 KIAA1210Q9ULL0 1709 aa31.15■■■□□ 2.58
RARA-203ENST00000394086 KTN1Q86UP2 1357 aaKnown RBP31.14■■■□□ 2.57
RARA-203ENST00000394086 NUDCQ9Y266 331 aa31.14■■■□□ 2.57
RARA-203ENST00000394086 TOM1O60784 492 aa31.13■■■□□ 2.57
RARA-203ENST00000394086 C19orf44Q9H6X5 657 aa31.13■■■□□ 2.57
RARA-203ENST00000394086 FBXO41Q8TF61 875 aa31.12■■■□□ 2.57
RARA-203ENST00000394086 SIRT1Q96EB6 747 aa31.11■■■□□ 2.57
RARA-203ENST00000394086 PLEKHH1Q9ULM0 1364 aa31.11■■■□□ 2.57
RARA-203ENST00000394086 PRAM1Q96QH2 718 aa31.1■■■□□ 2.57
RARA-203ENST00000394086 KNDC1Q76NI1 1749 aa31.1■■■□□ 2.57
RARA-203ENST00000394086 SAFB2Q14151 953 aaKnown RBP eCLIP31.09■■■□□ 2.57
RARA-203ENST00000394086 POGKQ9P215 609 aa31.09■■■□□ 2.57
RARA-203ENST00000394086 USP47Q96K76 1375 aa31.09■■■□□ 2.57
RARA-203ENST00000394086 RALGAPBQ86X10 1494 aa31.09■■■□□ 2.57
RARA-203ENST00000394086 TRPM1Q7Z4N2 1603 aa31.08■■■□□ 2.57
RARA-203ENST00000394086 FAM135BQ49AJ0 1406 aa31.08■■■□□ 2.57
RARA-203ENST00000394086 B4GALNT3Q6L9W6 998 aa31.08■■■□□ 2.57
RARA-203ENST00000394086 ATF3P18847 181 aa31.07■■■□□ 2.56
RARA-203ENST00000394086 PIP4K2BP78356 416 aa31.06■■■□□ 2.56
RARA-203ENST00000394086 ADGRL3Q9HAR2 1447 aa31.06■■■□□ 2.56
RARA-203ENST00000394086 DLC1Q96QB1 1528 aa31.05■■■□□ 2.56
RARA-203ENST00000394086 CADPS2Q86UW7 1296 aa31.03■■■□□ 2.56
RARA-203ENST00000394086 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.02■■■□□ 2.56
RARA-203ENST00000394086 NALCNQ8IZF0 1738 aa31■■■□□ 2.55
RARA-203ENST00000394086 CARD11Q9BXL7 1154 aa31■■■□□ 2.55
RARA-203ENST00000394086 SLAIN2Q9P270 581 aa31■■■□□ 2.55
RARA-203ENST00000394086 DCCP43146 1447 aa30.97■■■□□ 2.55
RARA-203ENST00000394086 GPRASP1Q5JY77 1395 aa30.97■■■□□ 2.55
RARA-203ENST00000394086 NOP58Q9Y2X3 529 aaKnown RBP30.97■■■□□ 2.55
RARA-203ENST00000394086 ILDR1Q86SU0 546 aaPredicted RBP30.96■■■□□ 2.55
RARA-203ENST00000394086 MINK1Q8N4C8 1332 aaPredicted RBP30.95■■■□□ 2.55
RARA-203ENST00000394086 ARHGEF28Q8N1W1 1705 aaKnown RBP30.95■■■□□ 2.55
RARA-203ENST00000394086 BRD4O60885 1362 aaPredicted RBP30.93■■■□□ 2.54
RARA-203ENST00000394086 PNISRQ8TF01 805 aaKnown RBP30.91■■■□□ 2.54
RARA-203ENST00000394086 CENPJQ9HC77 1338 aaPredicted RBP30.91■■■□□ 2.54
RARA-203ENST00000394086 CCDC136Q96JN2 1154 aa30.9■■■□□ 2.54
RARA-203ENST00000394086 NUTM2FA1L443 756 aa30.9■■■□□ 2.54
RARA-203ENST00000394086 MST1RQ04912 1400 aa30.88■■■□□ 2.53
RARA-203ENST00000394086 RALBP1Q15311 655 aa30.88■■■□□ 2.53
RARA-203ENST00000394086 EIF3AQ14152 1382 aaKnown RBP30.87■■■□□ 2.53
RARA-203ENST00000394086 CDC42BPGQ6DT37 1551 aa30.87■■■□□ 2.53
RARA-203ENST00000394086 PRKCSHP14314 528 aaPredicted RBP30.85■■■□□ 2.53
RARA-203ENST00000394086 ANP32AP39687 249 aaKnown RBP30.85■■■□□ 2.53
RARA-203ENST00000394086 TMC1Q8TDI8 760 aa30.83■■■□□ 2.53
RARA-203ENST00000394086 INSRP06213 1382 aa30.83■■■□□ 2.53
RARA-203ENST00000394086 C1orf167Q5SNV9 1468 aa30.83■■■□□ 2.53
RARA-203ENST00000394086 MYBBP1AQ9BQG0 1328 aaKnown RBP30.82■■■□□ 2.52
RARA-203ENST00000394086 WASLO00401 505 aaPredicted RBP30.82■■■□□ 2.52
RARA-203ENST00000394086 DEKP35659 375 aaKnown RBP30.82■■■□□ 2.52
RARA-203ENST00000394086 BRINP3Q76B58 766 aa30.81■■■□□ 2.52
RARA-203ENST00000394086 ROBO1Q9Y6N7 1651 aa30.8■■■□□ 2.52
RARA-203ENST00000394086 IPO9Q96P70 1041 aaKnown RBP30.8■■■□□ 2.52
RARA-203ENST00000394086 ORAI2Q96SN7 254 aa30.8■■■□□ 2.52
RARA-203ENST00000394086 ADGRB2O60241 1585 aa30.79■■■□□ 2.52
RARA-203ENST00000394086 ESCO1Q5FWF5 840 aa30.78■■■□□ 2.52
RARA-203ENST00000394086 CDK19Q9BWU1 502 aa30.78■■■□□ 2.52
RARA-203ENST00000394086 HSPA1LP34931 641 aa30.77■■■□□ 2.52
RARA-203ENST00000394086 PDE3BQ13370 1112 aa30.77■■■□□ 2.52
RARA-203ENST00000394086 QRICH2Q9H0J4 1663 aa30.76■■■□□ 2.52
RARA-203ENST00000394086 FMN2Q9NZ56 1722 aa30.76■■■□□ 2.51
RARA-203ENST00000394086 ST20-MTHFSA0A0A6YYL1 179 aa30.75■■■□□ 2.51
RARA-203ENST00000394086 SRPK2P78362 688 aaKnown RBP30.71■■■□□ 2.51
RARA-203ENST00000394086 PRR36Q9H6K5 1346 aa30.7■■■□□ 2.51
RARA-203ENST00000394086 DDX17Q92841 729 aaKnown RBP30.69■■■□□ 2.5
RARA-203ENST00000394086 EVC2Q86UK5 1308 aa30.69■■■□□ 2.5
RARA-203ENST00000394086 CABP2Q9NPB3 220 aa30.69■■■□□ 2.5
RARA-203ENST00000394086 ANKARQ7Z5J8 1434 aa30.69■■■□□ 2.5
RARA-203ENST00000394086 NUDT16Q96DE0 195 aaKnown RBP30.68■■■□□ 2.5
RARA-203ENST00000394086 TULP4Q9NRJ4 1543 aa30.68■■■□□ 2.5
RARA-203ENST00000394086 TCERG1O14776 1098 aaKnown RBP30.67■■■□□ 2.5
RARA-203ENST00000394086 SBNO2Q9Y2G9 1366 aa30.66■■■□□ 2.5
RARA-203ENST00000394086 RRP1P56182 461 aaKnown RBP30.66■■■□□ 2.5
RARA-203ENST00000394086 ZBTB47Q9UFB7 747 aaPredicted RBP30.66■■■□□ 2.5
RARA-203ENST00000394086 PHF8Q9UPP1 1060 aa30.66■■■□□ 2.5
RARA-203ENST00000394086 PARD3Q8TEW0 1356 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms