RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 SRPK2P78362 688 aaKnown RBP23.61■■□□□ 1.37
RUFY1-203ENST00000393448 NSD3Q9BZ95 1437 aa23.61■■□□□ 1.37
RUFY1-203ENST00000393448 NPC1L1Q9UHC9 1359 aa23.61■■□□□ 1.37
RUFY1-203ENST00000393448 PLEKHH1Q9ULM0 1364 aa23.59■■□□□ 1.37
RUFY1-203ENST00000393448 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
RUFY1-203ENST00000393448 LTKP29376 864 aa23.59■■□□□ 1.37
RUFY1-203ENST00000393448 HDGFP51858 240 aaKnown RBP23.58■■□□□ 1.37
RUFY1-203ENST00000393448 PUS7Q96PZ0 661 aaKnown RBP23.56■■□□□ 1.36
RUFY1-203ENST00000393448 FKBP8Q14318 412 aa23.56■■□□□ 1.36
RUFY1-203ENST00000393448 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
RUFY1-203ENST00000393448 DLC1Q96QB1 1528 aa23.54■■□□□ 1.36
RUFY1-203ENST00000393448 ABCC11Q96J66 1382 aa23.54■■□□□ 1.36
RUFY1-203ENST00000393448 CDK19Q9BWU1 502 aa23.54■■□□□ 1.36
RUFY1-203ENST00000393448 SALL2Q9Y467 1007 aaPredicted RBP23.53■■□□□ 1.36
RUFY1-203ENST00000393448 ANKRD36BQ8N2N9 1353 aa23.52■■□□□ 1.36
RUFY1-203ENST00000393448 ADAMTS13Q76LX8 1427 aa23.51■■□□□ 1.35
RUFY1-203ENST00000393448 RIMS1Q86UR5 1692 aaKnown RBP23.51■■□□□ 1.35
RUFY1-203ENST00000393448 TNNT2P45379 298 aaPredicted RBP23.5■■□□□ 1.35
RUFY1-203ENST00000393448 A0A1W2PP64 1363 aa23.49■■□□□ 1.35
RUFY1-203ENST00000393448 ADAMTS8Q9UP79 889 aa23.49■■□□□ 1.35
RUFY1-203ENST00000393448 SLC26A8Q96RN1 970 aa23.48■■□□□ 1.35
RUFY1-203ENST00000393448 ATAD2Q6PL18 1390 aa23.48■■□□□ 1.35
RUFY1-203ENST00000393448 NEFLP07196 543 aa23.48■■□□□ 1.35
RUFY1-203ENST00000393448 MORC1Q86VD1 984 aa23.48■■□□□ 1.35
RUFY1-203ENST00000393448 PLEKHG1Q9ULL1 1385 aa23.47■■□□□ 1.35
RUFY1-203ENST00000393448 CGNL1Q0VF96 1302 aa23.47■■□□□ 1.35
RUFY1-203ENST00000393448 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
RUFY1-203ENST00000393448 BLMP54132 1417 aaPredicted RBP23.46■■□□□ 1.35
RUFY1-203ENST00000393448 USP32Q8NFA0 1604 aa23.46■■□□□ 1.35
RUFY1-203ENST00000393448 CABP1Q9NZU7 370 aa23.45■■□□□ 1.34
RUFY1-203ENST00000393448 SLIT1O75093 1534 aa23.45■■□□□ 1.34
RUFY1-203ENST00000393448 CD163L1Q9NR16 1453 aa23.45■■□□□ 1.34
RUFY1-203ENST00000393448 KNDC1Q76NI1 1749 aa23.44■■□□□ 1.34
RUFY1-203ENST00000393448 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
RUFY1-203ENST00000393448 ARHGAP23Q9P227 1491 aa23.44■■□□□ 1.34
RUFY1-203ENST00000393448 IRX6P78412 446 aaPredicted RBP23.44■■□□□ 1.34
RUFY1-203ENST00000393448 NINLQ9Y2I6 1382 aa23.44■■□□□ 1.34
RUFY1-203ENST00000393448 THEMISQ8N1K5 641 aaPredicted RBP23.43■■□□□ 1.34
RUFY1-203ENST00000393448 ROBO2Q9HCK4 1378 aa23.43■■□□□ 1.34
RUFY1-203ENST00000393448 TECPR2O15040 1411 aa23.42■■□□□ 1.34
RUFY1-203ENST00000393448 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
RUFY1-203ENST00000393448 CPS1P31327 1500 aa23.42■■□□□ 1.34
RUFY1-203ENST00000393448 TERF2IPQ9NYB0 399 aa23.41■■□□□ 1.34
RUFY1-203ENST00000393448 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
RUFY1-203ENST00000393448 WASLO00401 505 aaPredicted RBP23.4■■□□□ 1.34
RUFY1-203ENST00000393448 FAM135BQ49AJ0 1406 aa23.4■■□□□ 1.34
RUFY1-203ENST00000393448 MED14O60244 1454 aa23.39■■□□□ 1.34
RUFY1-203ENST00000393448 CEP170BQ9Y4F5 1589 aaPredicted RBP23.39■■□□□ 1.33
RUFY1-203ENST00000393448 PTPRUQ92729 1446 aa23.39■■□□□ 1.33
RUFY1-203ENST00000393448 GGNBP2Q9H3C7 697 aa23.38■■□□□ 1.33
RUFY1-203ENST00000393448 ADAMTSL3P82987 1691 aa23.38■■□□□ 1.33
RUFY1-203ENST00000393448 INSRP06213 1382 aa23.38■■□□□ 1.33
RUFY1-203ENST00000393448 NCKAP5LQ9HCH0 1330 aa23.37■■□□□ 1.33
RUFY1-203ENST00000393448 SIRT1Q96EB6 747 aa23.37■■□□□ 1.33
RUFY1-203ENST00000393448 HDGFL2Q7Z4V5 671 aaPredicted RBP23.36■■□□□ 1.33
RUFY1-203ENST00000393448 CCDC146Q8IYE0 955 aa23.36■■□□□ 1.33
RUFY1-203ENST00000393448 NSD2O96028 1365 aa23.35■■□□□ 1.33
RUFY1-203ENST00000393448 FYB1O15117 783 aa23.34■■□□□ 1.33
RUFY1-203ENST00000393448 MTHFSP49914 203 aa23.34■■□□□ 1.33
RUFY1-203ENST00000393448 POLR3AO14802 1390 aaPredicted RBP23.34■■□□□ 1.33
RUFY1-203ENST00000393448 CDCA7LQ96GN5 454 aa23.33■■□□□ 1.33
RUFY1-203ENST00000393448 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.33■■□□□ 1.33
RUFY1-203ENST00000393448 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.33
RUFY1-203ENST00000393448 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
RUFY1-203ENST00000393448 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
RUFY1-203ENST00000393448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.31■■□□□ 1.32
RUFY1-203ENST00000393448 TBX22Q9Y458 520 aa23.31■■□□□ 1.32
RUFY1-203ENST00000393448 SHPRHQ149N8 1683 aa23.3■■□□□ 1.32
RUFY1-203ENST00000393448 NUTM2FA1L443 756 aa23.3■■□□□ 1.32
RUFY1-203ENST00000393448 ATP7BP35670 1465 aa23.29■■□□□ 1.32
RUFY1-203ENST00000393448 PRR36Q9H6K5 1346 aa23.29■■□□□ 1.32
RUFY1-203ENST00000393448 ANKRD26Q9UPS8 1709 aa23.27■■□□□ 1.32
RUFY1-203ENST00000393448 KIF20BQ96Q89 1820 aa23.27■■□□□ 1.32
RUFY1-203ENST00000393448 CCDC61Q9Y6R9 512 aa23.26■■□□□ 1.31
RUFY1-203ENST00000393448 PDE3BQ13370 1112 aa23.25■■□□□ 1.31
RUFY1-203ENST00000393448 CPSF1Q10570 1443 aaKnown RBP23.25■■□□□ 1.31
RUFY1-203ENST00000393448 APAF1O14727 1248 aa23.25■■□□□ 1.31
RUFY1-203ENST00000393448 ZNF142P52746 1687 aaPredicted RBP23.24■■□□□ 1.31
RUFY1-203ENST00000393448 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
RUFY1-203ENST00000393448 DIP2AQ14689 1571 aa23.24■■□□□ 1.31
RUFY1-203ENST00000393448 FBLN1P23142 703 aa23.22■■□□□ 1.31
RUFY1-203ENST00000393448 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
RUFY1-203ENST00000393448 SETD1BQ9UPS6 1966 aaKnown RBP23.22■■□□□ 1.31
RUFY1-203ENST00000393448 CDC42BPGQ6DT37 1551 aa23.22■■□□□ 1.31
RUFY1-203ENST00000393448 ANKLE2Q86XL3 938 aa23.21■■□□□ 1.31
RUFY1-203ENST00000393448 PTCH1Q13635 1447 aa23.2■■□□□ 1.31
RUFY1-203ENST00000393448 KCNA6P17658 529 aa23.2■■□□□ 1.3
RUFY1-203ENST00000393448 NME9Q86XW9 330 aa23.2■■□□□ 1.3
RUFY1-203ENST00000393448 ZRANB1Q9UGI0 708 aa23.2■■□□□ 1.3
RUFY1-203ENST00000393448 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
RUFY1-203ENST00000393448 EDC4Q6P2E9 1401 aaKnown RBP23.18■■□□□ 1.3
RUFY1-203ENST00000393448 ZNF521Q96K83 1311 aa23.18■■□□□ 1.3
RUFY1-203ENST00000393448 ITSN1Q15811 1721 aa23.18■■□□□ 1.3
RUFY1-203ENST00000393448 MON2Q7Z3U7 1717 aa23.18■■□□□ 1.3
RUFY1-203ENST00000393448 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
RUFY1-203ENST00000393448 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
RUFY1-203ENST00000393448 TOPAZ1Q8N9V7 1692 aa23.15■■□□□ 1.3
RUFY1-203ENST00000393448 RCAN3Q9UKA8 241 aa23.15■■□□□ 1.3
RUFY1-203ENST00000393448 NKTRP30414 1462 aaKnown RBP23.15■■□□□ 1.3
RUFY1-203ENST00000393448 U2AF1L5P0DN76 240 aaPredicted RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms