RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 NINLQ9Y2I6 1382 aa13.13□□□□□ -0.31
SYT1-202ENST00000393240 LTKP29376 864 aa13.12□□□□□ -0.31
SYT1-202ENST00000393240 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
SYT1-202ENST00000393240 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
SYT1-202ENST00000393240 METP08581 1390 aa13.12□□□□□ -0.31
SYT1-202ENST00000393240 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
SYT1-202ENST00000393240 TECPR2O15040 1411 aa13.11□□□□□ -0.31
SYT1-202ENST00000393240 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
SYT1-202ENST00000393240 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
SYT1-202ENST00000393240 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYT1-202ENST00000393240 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
SYT1-202ENST00000393240 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
SYT1-202ENST00000393240 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
SYT1-202ENST00000393240 BCANQ96GW7 911 aa13.1□□□□□ -0.31
SYT1-202ENST00000393240 CABP2Q9NPB3 220 aa13.09□□□□□ -0.31
SYT1-202ENST00000393240 MED14O60244 1454 aa13.09□□□□□ -0.31
SYT1-202ENST00000393240 MINK1Q8N4C8 1332 aaPredicted RBP13.09□□□□□ -0.31
SYT1-202ENST00000393240 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
SYT1-202ENST00000393240 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
SYT1-202ENST00000393240 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
SYT1-202ENST00000393240 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
SYT1-202ENST00000393240 ZBED9Q6R2W3 1325 aa13.08□□□□□ -0.32
SYT1-202ENST00000393240 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
SYT1-202ENST00000393240 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
SYT1-202ENST00000393240 INSRP06213 1382 aa13.08□□□□□ -0.32
SYT1-202ENST00000393240 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
SYT1-202ENST00000393240 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
SYT1-202ENST00000393240 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
SYT1-202ENST00000393240 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
SYT1-202ENST00000393240 CPS1P31327 1500 aa13.06□□□□□ -0.32
SYT1-202ENST00000393240 PLEKHH1Q9ULM0 1364 aa13.06□□□□□ -0.32
SYT1-202ENST00000393240 CEP170BQ9Y4F5 1589 aaPredicted RBP13.06□□□□□ -0.32
SYT1-202ENST00000393240 USP32Q8NFA0 1604 aa13.05□□□□□ -0.32
SYT1-202ENST00000393240 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
SYT1-202ENST00000393240 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
SYT1-202ENST00000393240 NSD2O96028 1365 aa13.04□□□□□ -0.32
SYT1-202ENST00000393240 DIP2AQ14689 1571 aa13.04□□□□□ -0.32
SYT1-202ENST00000393240 WASLO00401 505 aaPredicted RBP13.04□□□□□ -0.32
SYT1-202ENST00000393240 SLC26A8Q96RN1 970 aa13.02□□□□□ -0.32
SYT1-202ENST00000393240 A0A1W2PP64 1363 aa13.02□□□□□ -0.33
SYT1-202ENST00000393240 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
SYT1-202ENST00000393240 ZNF142P52746 1687 aaPredicted RBP13.01□□□□□ -0.33
SYT1-202ENST00000393240 HDGFL2Q7Z4V5 671 aaPredicted RBP13.01□□□□□ -0.33
SYT1-202ENST00000393240 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
SYT1-202ENST00000393240 ANKLE2Q86XL3 938 aa13.01□□□□□ -0.33
SYT1-202ENST00000393240 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
SYT1-202ENST00000393240 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
SYT1-202ENST00000393240 PIK3R4Q99570 1358 aa13□□□□□ -0.33
SYT1-202ENST00000393240 CABP1Q9NZU7 370 aa13□□□□□ -0.33
SYT1-202ENST00000393240 AMOTL2Q9Y2J4 779 aa13□□□□□ -0.33
SYT1-202ENST00000393240 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
SYT1-202ENST00000393240 ATP7BP35670 1465 aa12.99□□□□□ -0.33
SYT1-202ENST00000393240 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
SYT1-202ENST00000393240 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
SYT1-202ENST00000393240 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
SYT1-202ENST00000393240 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
SYT1-202ENST00000393240 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
SYT1-202ENST00000393240 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
SYT1-202ENST00000393240 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
SYT1-202ENST00000393240 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
SYT1-202ENST00000393240 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.33
SYT1-202ENST00000393240 PPIP5K1Q6PFW1 1433 aa12.95□□□□□ -0.34
SYT1-202ENST00000393240 FYB1O15117 783 aa12.95□□□□□ -0.34
SYT1-202ENST00000393240 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.94□□□□□ -0.34
SYT1-202ENST00000393240 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
SYT1-202ENST00000393240 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
SYT1-202ENST00000393240 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
SYT1-202ENST00000393240 PDE3BQ13370 1112 aa12.92□□□□□ -0.34
SYT1-202ENST00000393240 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
SYT1-202ENST00000393240 PRR36Q9H6K5 1346 aa12.92□□□□□ -0.34
SYT1-202ENST00000393240 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
SYT1-202ENST00000393240 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
SYT1-202ENST00000393240 MTHFSP49914 203 aa12.91□□□□□ -0.34
SYT1-202ENST00000393240 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
SYT1-202ENST00000393240 GGNBP2Q9H3C7 697 aa12.91□□□□□ -0.34
SYT1-202ENST00000393240 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
SYT1-202ENST00000393240 NUDCQ9Y266 331 aa12.91□□□□□ -0.34
SYT1-202ENST00000393240 KCNA6P17658 529 aa12.9□□□□□ -0.34
SYT1-202ENST00000393240 NPHP4O75161 1426 aaPredicted RBP12.9□□□□□ -0.34
SYT1-202ENST00000393240 NEFLP07196 543 aa12.89□□□□□ -0.35
SYT1-202ENST00000393240 ANKRD26Q9UPS8 1709 aa12.89□□□□□ -0.35
SYT1-202ENST00000393240 SUPT16HQ9Y5B9 1047 aaKnown RBP12.89□□□□□ -0.35
SYT1-202ENST00000393240 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
SYT1-202ENST00000393240 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
SYT1-202ENST00000393240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYT1-202ENST00000393240 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
SYT1-202ENST00000393240 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
SYT1-202ENST00000393240 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
SYT1-202ENST00000393240 ACEP12821 1306 aa12.86□□□□□ -0.35
SYT1-202ENST00000393240 FKBP8Q14318 412 aa12.86□□□□□ -0.35
SYT1-202ENST00000393240 KIF20BQ96Q89 1820 aa12.86□□□□□ -0.35
SYT1-202ENST00000393240 MON2Q7Z3U7 1717 aa12.85□□□□□ -0.35
SYT1-202ENST00000393240 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
SYT1-202ENST00000393240 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
SYT1-202ENST00000393240 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
SYT1-202ENST00000393240 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
SYT1-202ENST00000393240 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
SYT1-202ENST00000393240 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
SYT1-202ENST00000393240 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
SYT1-202ENST00000393240 NME9Q86XW9 330 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms