RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 PTPRUQ92729 1446 aa4.89□□□□□ -1.63
ATP2B1-203ENST00000393164 ATAD2Q6PL18 1390 aa4.89□□□□□ -1.63
ATP2B1-203ENST00000393164 MINK1Q8N4C8 1332 aaPredicted RBP4.89□□□□□ -1.63
ATP2B1-203ENST00000393164 ATF3P18847 181 aa4.89□□□□□ -1.63
ATP2B1-203ENST00000393164 WAPLQ7Z5K2 1190 aa4.89□□□□□ -1.63
ATP2B1-203ENST00000393164 POLR3GLQ9BT43 218 aa4.89□□□□□ -1.63
ATP2B1-203ENST00000393164 C19orf44Q9H6X5 657 aa4.89□□□□□ -1.63
ATP2B1-203ENST00000393164 NWD1Q149M9 1564 aa4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 MSH6P52701 1360 aa4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 NINLQ9Y2I6 1382 aa4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 TESK2Q96S53 571 aa4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 STRCQ7RTU9 1775 aa4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 WASLO00401 505 aaPredicted RBP4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 CADPS2Q86UW7 1296 aa4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 HIRIP3Q9BW71 556 aaPredicted RBP4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 XRN1Q8IZH2 1706 aaKnown RBP4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 ADGRL3Q9HAR2 1447 aa4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 ZNF335Q9H4Z2 1342 aaPredicted RBP4.88□□□□□ -1.63
ATP2B1-203ENST00000393164 CHD2O14647 1828 aaKnown RBP4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 ARHGEF28Q8N1W1 1705 aaKnown RBP4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 TMEM94Q12767 1356 aa4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 CDK19Q9BWU1 502 aa4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 DCCP43146 1447 aa4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 PLEKHH1Q9ULM0 1364 aa4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 TERF2IPQ9NYB0 399 aa4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 CCDC61Q9Y6R9 512 aa4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 CCDC7Q96M83 1385 aa4.87□□□□□ -1.63
ATP2B1-203ENST00000393164 KIF7Q2M1P5 1343 aa4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 QRICH2Q9H0J4 1663 aa4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 TMC1Q8TDI8 760 aa4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 HDGFL2Q7Z4V5 671 aaPredicted RBP4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 ANKARQ7Z5J8 1434 aa4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 ADGRB2O60241 1585 aa4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 NUDT16Q96DE0 195 aaKnown RBP4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 CABP2Q9NPB3 220 aa4.86□□□□□ -1.63
ATP2B1-203ENST00000393164 WASHC2AQ641Q2 1341 aa4.85□□□□□ -1.63
ATP2B1-203ENST00000393164 ZNF692Q9BU19 519 aaPredicted RBP4.85□□□□□ -1.63
ATP2B1-203ENST00000393164 CDC42BPGQ6DT37 1551 aa4.85□□□□□ -1.63
ATP2B1-203ENST00000393164 LRRC7Q96NW7 1537 aa4.85□□□□□ -1.63
ATP2B1-203ENST00000393164 TULP4Q9NRJ4 1543 aa4.84□□□□□ -1.63
ATP2B1-203ENST00000393164 TOM1O60784 492 aa4.84□□□□□ -1.63
ATP2B1-203ENST00000393164 NGDNQ8NEJ9 315 aaKnown RBP4.84□□□□□ -1.63
ATP2B1-203ENST00000393164 KNSTRNQ9Y448 316 aa4.84□□□□□ -1.63
ATP2B1-203ENST00000393164 DDX10Q13206 875 aaKnown RBP4.84□□□□□ -1.63
ATP2B1-203ENST00000393164 RBM33Q96EV2 1170 aaKnown RBP4.84□□□□□ -1.63
ATP2B1-203ENST00000393164 ESCO1Q5FWF5 840 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 CABP1Q9NZU7 370 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 PPIP5K1Q6PFW1 1433 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 BRD4O60885 1362 aaPredicted RBP4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 ANKRD36BQ8N2N9 1353 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 PLEKHG3A1L390 1219 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 NUTM2FA1L443 756 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 C11orf95C9JLR9 678 aaPredicted RBP4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 PHF8Q9UPP1 1060 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 ATP7BP35670 1465 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 PSME1Q06323 249 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 PANK3Q9H999 370 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 SLAIN2Q9P270 581 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 CGNL1Q0VF96 1302 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 NPHP3Q7Z494 1330 aa4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.83□□□□□ -1.64
ATP2B1-203ENST00000393164 ANP32CO43423 234 aa4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 DIEXFQ68CQ4 756 aaKnown RBP4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 SLC12A5Q9H2X9 1139 aa4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 LTBP4Q8N2S1 1624 aa4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 CERKQ8TCT0 537 aa4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 C1orf167Q5SNV9 1468 aa4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 KTN1Q86UP2 1357 aaKnown RBP4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 NALCNQ8IZF0 1738 aa4.82□□□□□ -1.64
ATP2B1-203ENST00000393164 ACEP12821 1306 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 PRR36Q9H6K5 1346 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 ITSN1Q15811 1721 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 NSD2O96028 1365 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 MST1RQ04912 1400 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 PMFBP1Q8TBY8 1022 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 FMN2Q9NZ56 1722 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 TTC21AQ8NDW8 1320 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 STRCP1A6NGW2 1772 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 POLR3AO14802 1390 aaPredicted RBP4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 EDC4Q6P2E9 1401 aaKnown RBP4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 UBAP1LF5GYI3 381 aa4.81□□□□□ -1.64
ATP2B1-203ENST00000393164 A0A1W2PP64 1363 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 RALBP1Q15311 655 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 POTEDQ86YR6 584 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 SCAF1Q9H7N4 1312 aaKnown RBP4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 NPC1L1Q9UHC9 1359 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 KIF1AQ12756 1690 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 FOXO3O43524 673 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 PAK3O75914 559 aaPredicted RBP4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 ORAI2Q96SN7 254 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 CPSF1Q10570 1443 aaKnown RBP4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 NSD3Q9BZ95 1437 aa4.8□□□□□ -1.64
ATP2B1-203ENST00000393164 BRINP3Q76B58 766 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 KRT28Q7Z3Y7 464 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 COG3Q96JB2 828 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 USP6P35125 1406 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 NLRP13Q86W25 1043 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 ARHGEF10O15013 1369 aa4.79□□□□□ -1.64
ATP2B1-203ENST00000393164 PER1O15534 1290 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms