RNA–Protein interactions for RNA: ENST00000392467.7

TMC6-203, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC6, Length 2,833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-203ENST00000392467 RAPGEF3O95398 923 aa23.36■■□□□ 1.33
TMC6-203ENST00000392467 MAPK8IP3Q9UPT6 1336 aa23.36■■□□□ 1.33
TMC6-203ENST00000392467 PPRC1Q5VV67 1664 aaKnown RBP23.35■■□□□ 1.33
TMC6-203ENST00000392467 ABCA6Q8N139 1617 aa23.35■■□□□ 1.33
TMC6-203ENST00000392467 FAM43AQ8N2R8 423 aa23.35■■□□□ 1.33
TMC6-203ENST00000392467 UGGT1Q9NYU2 1555 aa23.35■■□□□ 1.33
TMC6-203ENST00000392467 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
TMC6-203ENST00000392467 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
TMC6-203ENST00000392467 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
TMC6-203ENST00000392467 LMTK2Q8IWU2 1503 aa23.34■■□□□ 1.33
TMC6-203ENST00000392467 PDZRN3Q9UPQ7 1066 aa23.34■■□□□ 1.33
TMC6-203ENST00000392467 SYNMO15061 1565 aa23.34■■□□□ 1.33
TMC6-203ENST00000392467 TBC1D2Q9BYX2 928 aa23.33■■□□□ 1.33
TMC6-203ENST00000392467 MAP3K4Q9Y6R4 1608 aa23.33■■□□□ 1.32
TMC6-203ENST00000392467 RRAGDQ9NQL2 400 aaPredicted RBP23.32■■□□□ 1.32
TMC6-203ENST00000392467 RARSP54136 660 aaKnown RBP23.31■■□□□ 1.32
TMC6-203ENST00000392467 UPF2Q9HAU5 1272 aaKnown RBP23.31■■□□□ 1.32
TMC6-203ENST00000392467 IQGAP1P46940 1657 aa23.3■■□□□ 1.32
TMC6-203ENST00000392467 ANTXR1Q9H6X2 564 aa23.3■■□□□ 1.32
TMC6-203ENST00000392467 GGT6Q6P531 493 aa23.29■■□□□ 1.32
TMC6-203ENST00000392467 TCP11L2Q8N4U5 519 aa23.29■■□□□ 1.32
TMC6-203ENST00000392467 NLRP1Q9C000 1473 aa23.28■■□□□ 1.32
TMC6-203ENST00000392467 MYOM1P52179 1685 aa23.28■■□□□ 1.32
TMC6-203ENST00000392467 NEURL4Q96JN8 1562 aa23.28■■□□□ 1.32
TMC6-203ENST00000392467 ADGRF5Q8IZF2 1346 aa23.28■■□□□ 1.32
TMC6-203ENST00000392467 MORC1Q86VD1 984 aa23.28■■□□□ 1.32
TMC6-203ENST00000392467 STAC3Q96MF2 364 aa23.27■■□□□ 1.32
TMC6-203ENST00000392467 TBC1D32Q96NH3 1257 aa23.27■■□□□ 1.32
TMC6-203ENST00000392467 RICTORQ6R327 1708 aa23.26■■□□□ 1.31
TMC6-203ENST00000392467 GLI2P10070 1586 aa23.26■■□□□ 1.31
TMC6-203ENST00000392467 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
TMC6-203ENST00000392467 MFAP1P55081 439 aaKnown RBP23.25■■□□□ 1.31
TMC6-203ENST00000392467 NPATQ14207 1427 aa23.25■■□□□ 1.31
TMC6-203ENST00000392467 PANK2Q9BZ23 570 aa23.25■■□□□ 1.31
TMC6-203ENST00000392467 DIP2CQ9Y2E4 1556 aa23.25■■□□□ 1.31
TMC6-203ENST00000392467 NPC1L1Q9UHC9 1359 aa23.24■■□□□ 1.31
TMC6-203ENST00000392467 SLC12A5Q9H2X9 1139 aa23.24■■□□□ 1.31
TMC6-203ENST00000392467 CHGAP10645 457 aaKnown RBP23.23■■□□□ 1.31
TMC6-203ENST00000392467 KIF1BO60333 1816 aa23.23■■□□□ 1.31
TMC6-203ENST00000392467 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
TMC6-203ENST00000392467 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
TMC6-203ENST00000392467 ERVK-7P63135 1459 aa23.22■■□□□ 1.31
TMC6-203ENST00000392467 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
TMC6-203ENST00000392467 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
TMC6-203ENST00000392467 ABCC3O15438 1527 aa23.21■■□□□ 1.31
TMC6-203ENST00000392467 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
TMC6-203ENST00000392467 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
TMC6-203ENST00000392467 XRCC6P12956 609 aaKnown RBP eCLIP23.2■■□□□ 1.32e-6■■□□□ 14.3
TMC6-203ENST00000392467 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
TMC6-203ENST00000392467 KDM5AP29375 1690 aaKnown RBP23.19■■□□□ 1.3
TMC6-203ENST00000392467 MTHFSP49914 203 aa23.19■■□□□ 1.3
TMC6-203ENST00000392467 FAM69CQ0P6D2 419 aa23.19■■□□□ 1.3
TMC6-203ENST00000392467 L1TD1Q5T7N2 865 aaKnown RBP23.19■■□□□ 1.3
TMC6-203ENST00000392467 MYOM2P54296 1465 aa23.19■■□□□ 1.3
TMC6-203ENST00000392467 TSR2Q969E8 191 aaKnown RBP23.18■■□□□ 1.3
TMC6-203ENST00000392467 RWDD1Q9H446 243 aaPredicted RBP23.18■■□□□ 1.3
TMC6-203ENST00000392467 UBE2Q2Q8WVN8 375 aa23.18■■□□□ 1.3
TMC6-203ENST00000392467 NSD3Q9BZ95 1437 aa23.18■■□□□ 1.3
TMC6-203ENST00000392467 CFAP65Q6ZU64 1925 aaKnown RBP23.18■■□□□ 1.3
TMC6-203ENST00000392467 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
TMC6-203ENST00000392467 IFT172Q9UG01 1749 aa23.17■■□□□ 1.3
TMC6-203ENST00000392467 FTSJ3Q8IY81 847 aaKnown RBP23.17■■□□□ 1.3
TMC6-203ENST00000392467 GOLGA6L3A6NEY3 463 aa23.17■■□□□ 1.3
TMC6-203ENST00000392467 KIAA1210Q9ULL0 1709 aa23.16■■□□□ 1.3
TMC6-203ENST00000392467 ADGRB3O60242 1522 aa23.16■■□□□ 1.3
TMC6-203ENST00000392467 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
TMC6-203ENST00000392467 MCM4P33991 863 aa23.16■■□□□ 1.3
TMC6-203ENST00000392467 POLR3AO14802 1390 aaPredicted RBP23.15■■□□□ 1.3
TMC6-203ENST00000392467 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
TMC6-203ENST00000392467 C22orf23Q9BZE7 217 aa23.14■■□□□ 1.3
TMC6-203ENST00000392467 U2AF1L5P0DN76 240 aaPredicted RBP23.14■■□□□ 1.29
TMC6-203ENST00000392467 U2AF1Q01081 240 aaKnown RBP eCLIP23.14■■□□□ 1.29
TMC6-203ENST00000392467 TMEM132EQ6IEE7 984 aa23.14■■□□□ 1.29
TMC6-203ENST00000392467 NGEFQ8N5V2 710 aa23.13■■□□□ 1.29
TMC6-203ENST00000392467 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
TMC6-203ENST00000392467 SIGLEC1Q9BZZ2 1709 aa23.12■■□□□ 1.29
TMC6-203ENST00000392467 NRXN1Q9ULB1 1477 aa23.12■■□□□ 1.29
TMC6-203ENST00000392467 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
TMC6-203ENST00000392467 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
TMC6-203ENST00000392467 NOS1P29475 1434 aa23.1■■□□□ 1.29
TMC6-203ENST00000392467 TRAK2O60296 914 aa23.1■■□□□ 1.29
TMC6-203ENST00000392467 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
TMC6-203ENST00000392467 DZIP1LQ8IYY4 767 aaKnown RBP23.09■■□□□ 1.29
TMC6-203ENST00000392467 SMC4Q9NTJ3 1288 aa23.09■■□□□ 1.29
TMC6-203ENST00000392467 ZKSCAN2Q63HK3 967 aa23.09■■□□□ 1.29
TMC6-203ENST00000392467 TSPOAP1O95153 1857 aa23.08■■□□□ 1.29
TMC6-203ENST00000392467 WDR63Q8IWG1 891 aa23.08■■□□□ 1.29
TMC6-203ENST00000392467 EXOSC9Q06265 439 aaKnown RBP23.07■■□□□ 1.28
TMC6-203ENST00000392467 SAFB2Q14151 953 aaKnown RBP eCLIP23.06■■□□□ 1.28
TMC6-203ENST00000392467 U2SURPO15042 1029 aaKnown RBP23.06■■□□□ 1.28
TMC6-203ENST00000392467 CHMP5Q9NZZ3 219 aa23.06■■□□□ 1.28
TMC6-203ENST00000392467 PHF23Q9BUL5 403 aaPredicted RBP23.05■■□□□ 1.28
TMC6-203ENST00000392467 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
TMC6-203ENST00000392467 FOXD4L1Q9NU39 408 aa23.05■■□□□ 1.28
TMC6-203ENST00000392467 PPLO60437 1756 aa23.05■■□□□ 1.28
TMC6-203ENST00000392467 TRIM27P14373 513 aa23.04■■□□□ 1.28
TMC6-203ENST00000392467 CFAP53Q96M91 514 aa23.04■■□□□ 1.28
TMC6-203ENST00000392467 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
TMC6-203ENST00000392467 ZC3H13Q5T200 1668 aaKnown RBP23.04■■□□□ 1.28
TMC6-203ENST00000392467 FSD2A1L4K1 749 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms