RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 SAFB2Q14151 953 aaKnown RBP eCLIP16.46■□□□□ 0.23
VIL1-202ENST00000392114 ATAD2Q6PL18 1390 aa16.46■□□□□ 0.23
VIL1-202ENST00000392114 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.22
VIL1-202ENST00000392114 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
VIL1-202ENST00000392114 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
VIL1-202ENST00000392114 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
VIL1-202ENST00000392114 SLC26A8Q96RN1 970 aa16.44■□□□□ 0.22
VIL1-202ENST00000392114 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
VIL1-202ENST00000392114 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
VIL1-202ENST00000392114 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
VIL1-202ENST00000392114 MYBBP1AQ9BQG0 1328 aaKnown RBP16.42■□□□□ 0.22
VIL1-202ENST00000392114 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
VIL1-202ENST00000392114 AMOTL2Q9Y2J4 779 aa16.41■□□□□ 0.22
VIL1-202ENST00000392114 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
VIL1-202ENST00000392114 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
VIL1-202ENST00000392114 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
VIL1-202ENST00000392114 PTCH1Q13635 1447 aa16.39■□□□□ 0.21
VIL1-202ENST00000392114 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
VIL1-202ENST00000392114 TERF2IPQ9NYB0 399 aa16.39■□□□□ 0.21
VIL1-202ENST00000392114 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
VIL1-202ENST00000392114 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
VIL1-202ENST00000392114 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
VIL1-202ENST00000392114 NPHP4O75161 1426 aaPredicted RBP16.38■□□□□ 0.21
VIL1-202ENST00000392114 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
VIL1-202ENST00000392114 PLEKHH1Q9ULM0 1364 aa16.37■□□□□ 0.21
VIL1-202ENST00000392114 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
VIL1-202ENST00000392114 NLRP13Q86W25 1043 aa16.37■□□□□ 0.21
VIL1-202ENST00000392114 ROBO2Q9HCK4 1378 aa16.37■□□□□ 0.21
VIL1-202ENST00000392114 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
VIL1-202ENST00000392114 HDGFL2Q7Z4V5 671 aaPredicted RBP16.36■□□□□ 0.21
VIL1-202ENST00000392114 CHD2O14647 1828 aaKnown RBP16.36■□□□□ 0.21
VIL1-202ENST00000392114 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
VIL1-202ENST00000392114 ADGRB2O60241 1585 aa16.35■□□□□ 0.21
VIL1-202ENST00000392114 XRN1Q8IZH2 1706 aaKnown RBP16.35■□□□□ 0.21
VIL1-202ENST00000392114 USP32Q8NFA0 1604 aa16.35■□□□□ 0.21
VIL1-202ENST00000392114 CGNL1Q0VF96 1302 aa16.34■□□□□ 0.21
VIL1-202ENST00000392114 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
VIL1-202ENST00000392114 NSD2O96028 1365 aa16.33■□□□□ 0.2
VIL1-202ENST00000392114 KDM4FA0A1W2PPD8 638 aa16.33■□□□□ 0.2
VIL1-202ENST00000392114 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
VIL1-202ENST00000392114 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
VIL1-202ENST00000392114 ATP7BP35670 1465 aa16.32■□□□□ 0.2
VIL1-202ENST00000392114 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.31■□□□□ 0.2
VIL1-202ENST00000392114 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
VIL1-202ENST00000392114 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
VIL1-202ENST00000392114 KCNA6P17658 529 aa16.3■□□□□ 0.2
VIL1-202ENST00000392114 NCKAP5LQ9HCH0 1330 aa16.29■□□□□ 0.2
VIL1-202ENST00000392114 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
VIL1-202ENST00000392114 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
VIL1-202ENST00000392114 CCDC184Q52MB2 194 aa16.29■□□□□ 0.2
VIL1-202ENST00000392114 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
VIL1-202ENST00000392114 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
VIL1-202ENST00000392114 MORC1Q86VD1 984 aa16.27■□□□□ 0.2
VIL1-202ENST00000392114 PPP2R1AP30153 589 aa16.27■□□□□ 0.19
VIL1-202ENST00000392114 PNISRQ8TF01 805 aaKnown RBP16.26■□□□□ 0.19
VIL1-202ENST00000392114 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
VIL1-202ENST00000392114 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
VIL1-202ENST00000392114 NWD1Q149M9 1564 aa16.23■□□□□ 0.19
VIL1-202ENST00000392114 CDC42BPGQ6DT37 1551 aa16.23■□□□□ 0.19
VIL1-202ENST00000392114 CPSF1Q10570 1443 aaKnown RBP16.23■□□□□ 0.19
VIL1-202ENST00000392114 ANKARQ7Z5J8 1434 aa16.23■□□□□ 0.19
VIL1-202ENST00000392114 PLEKHG3A1L390 1219 aa16.23■□□□□ 0.19
VIL1-202ENST00000392114 ANKRD26Q9UPS8 1709 aa16.22■□□□□ 0.19
VIL1-202ENST00000392114 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
VIL1-202ENST00000392114 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
VIL1-202ENST00000392114 INSRP06213 1382 aa16.22■□□□□ 0.19
VIL1-202ENST00000392114 AKAP12Q02952 1782 aa16.22■□□□□ 0.19
VIL1-202ENST00000392114 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.19
VIL1-202ENST00000392114 NKTRP30414 1462 aaKnown RBP16.21■□□□□ 0.19
VIL1-202ENST00000392114 KIF20BQ96Q89 1820 aa16.21■□□□□ 0.19
VIL1-202ENST00000392114 LMTK3Q96Q04 1460 aa16.21■□□□□ 0.18
VIL1-202ENST00000392114 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
VIL1-202ENST00000392114 PRR36Q9H6K5 1346 aa16.19■□□□□ 0.18
VIL1-202ENST00000392114 FYB1O15117 783 aa16.19■□□□□ 0.18
VIL1-202ENST00000392114 FMN2Q9NZ56 1722 aa16.19■□□□□ 0.18
VIL1-202ENST00000392114 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
VIL1-202ENST00000392114 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
VIL1-202ENST00000392114 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
VIL1-202ENST00000392114 PROSER2Q86WR7 435 aaPredicted RBP16.18■□□□□ 0.18
VIL1-202ENST00000392114 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
VIL1-202ENST00000392114 NCOA3Q9Y6Q9 1424 aa16.18■□□□□ 0.18
VIL1-202ENST00000392114 HSPA2P54652 639 aa16.18■□□□□ 0.18
VIL1-202ENST00000392114 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
VIL1-202ENST00000392114 ACEP12821 1306 aa16.17■□□□□ 0.18
VIL1-202ENST00000392114 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
VIL1-202ENST00000392114 RGPD8O14715 1765 aaPredicted RBP16.16■□□□□ 0.18
VIL1-202ENST00000392114 NUTM2FA1L443 756 aa16.15■□□□□ 0.18
VIL1-202ENST00000392114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.15■□□□□ 0.18
VIL1-202ENST00000392114 NGDNQ8NEJ9 315 aaKnown RBP16.15■□□□□ 0.18
VIL1-202ENST00000392114 GGNBP2Q9H3C7 697 aa16.15■□□□□ 0.18
VIL1-202ENST00000392114 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
VIL1-202ENST00000392114 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
VIL1-202ENST00000392114 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
VIL1-202ENST00000392114 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
VIL1-202ENST00000392114 TTC21AQ8NDW8 1320 aa16.13■□□□□ 0.17
VIL1-202ENST00000392114 COG3Q96JB2 828 aa16.13■□□□□ 0.17
VIL1-202ENST00000392114 C19orf44Q9H6X5 657 aa16.13■□□□□ 0.17
VIL1-202ENST00000392114 USP6P35125 1406 aa16.13■□□□□ 0.17
VIL1-202ENST00000392114 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
VIL1-202ENST00000392114 MTHFSP49914 203 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms