RNA–Protein interactions for RNA: ENST00000391440.2

RTL8B-201, Transcript of retrotransposon Gag like 8B, humanhuman

APPRIS P1 BASIC

Gene RTL8B, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8B-201ENST00000391440 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
RTL8B-201ENST00000391440 MYBBP1AQ9BQG0 1328 aaKnown RBP23.96■■□□□ 1.43
RTL8B-201ENST00000391440 CARD14Q9BXL6 1004 aa23.96■■□□□ 1.43
RTL8B-201ENST00000391440 PARD3Q8TEW0 1356 aa23.95■■□□□ 1.43
RTL8B-201ENST00000391440 DLC1Q96QB1 1528 aa23.95■■□□□ 1.42
RTL8B-201ENST00000391440 AMER1Q5JTC6 1135 aaPredicted RBP23.94■■□□□ 1.42
RTL8B-201ENST00000391440 PUS7Q96PZ0 661 aaKnown RBP23.94■■□□□ 1.42
RTL8B-201ENST00000391440 CDK19Q9BWU1 502 aa23.94■■□□□ 1.42
RTL8B-201ENST00000391440 SETD1BQ9UPS6 1966 aaKnown RBP23.91■■□□□ 1.42
RTL8B-201ENST00000391440 TBX22Q9Y458 520 aa23.91■■□□□ 1.42
RTL8B-201ENST00000391440 MED14O60244 1454 aa23.9■■□□□ 1.42
RTL8B-201ENST00000391440 ANKLE2Q86XL3 938 aa23.9■■□□□ 1.42
RTL8B-201ENST00000391440 SIRT1Q96EB6 747 aa23.89■■□□□ 1.41
RTL8B-201ENST00000391440 TECPR2O15040 1411 aa23.88■■□□□ 1.41
RTL8B-201ENST00000391440 ROBO2Q9HCK4 1378 aa23.88■■□□□ 1.41
RTL8B-201ENST00000391440 NLRP13Q86W25 1043 aa23.88■■□□□ 1.41
RTL8B-201ENST00000391440 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
RTL8B-201ENST00000391440 PTPRUQ92729 1446 aa23.87■■□□□ 1.41
RTL8B-201ENST00000391440 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
RTL8B-201ENST00000391440 HNRNPUQ00839 825 aaKnown RBP eCLIP23.86■■□□□ 1.41
RTL8B-201ENST00000391440 BRD4O60885 1362 aaPredicted RBP23.86■■□□□ 1.41
RTL8B-201ENST00000391440 NSD3Q9BZ95 1437 aa23.85■■□□□ 1.41
RTL8B-201ENST00000391440 ATAD2Q6PL18 1390 aa23.85■■□□□ 1.41
RTL8B-201ENST00000391440 ZNF142P52746 1687 aaPredicted RBP23.85■■□□□ 1.41
RTL8B-201ENST00000391440 WASLO00401 505 aaPredicted RBP23.84■■□□□ 1.41
RTL8B-201ENST00000391440 KNDC1Q76NI1 1749 aa23.84■■□□□ 1.41
RTL8B-201ENST00000391440 PNISRQ8TF01 805 aaKnown RBP23.83■■□□□ 1.41
RTL8B-201ENST00000391440 CPS1P31327 1500 aa23.83■■□□□ 1.41
RTL8B-201ENST00000391440 NPC1L1Q9UHC9 1359 aa23.82■■□□□ 1.4
RTL8B-201ENST00000391440 CABP1Q9NZU7 370 aa23.82■■□□□ 1.4
RTL8B-201ENST00000391440 ANKRD36BQ8N2N9 1353 aa23.81■■□□□ 1.4
RTL8B-201ENST00000391440 PPP2R1AP30153 589 aa23.8■■□□□ 1.4
RTL8B-201ENST00000391440 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
RTL8B-201ENST00000391440 TERF2IPQ9NYB0 399 aa23.78■■□□□ 1.4
RTL8B-201ENST00000391440 A0A1W2PP64 1363 aa23.78■■□□□ 1.4
RTL8B-201ENST00000391440 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
RTL8B-201ENST00000391440 CGNL1Q0VF96 1302 aa23.76■■□□□ 1.39
RTL8B-201ENST00000391440 NCKAP5LQ9HCH0 1330 aa23.75■■□□□ 1.39
RTL8B-201ENST00000391440 KCNA6P17658 529 aa23.75■■□□□ 1.39
RTL8B-201ENST00000391440 NUDT16Q96DE0 195 aaKnown RBP23.75■■□□□ 1.39
RTL8B-201ENST00000391440 HDGFL2Q7Z4V5 671 aaPredicted RBP23.74■■□□□ 1.39
RTL8B-201ENST00000391440 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
RTL8B-201ENST00000391440 TNNT2P45379 298 aaPredicted RBP23.73■■□□□ 1.39
RTL8B-201ENST00000391440 NUTM2FA1L443 756 aa23.72■■□□□ 1.39
RTL8B-201ENST00000391440 CD163L1Q9NR16 1453 aa23.72■■□□□ 1.39
RTL8B-201ENST00000391440 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.72■■□□□ 1.39
RTL8B-201ENST00000391440 KDM4FA0A1W2PPD8 638 aa23.72■■□□□ 1.39
RTL8B-201ENST00000391440 PIK3R4Q99570 1358 aa23.71■■□□□ 1.39
RTL8B-201ENST00000391440 PTCH1Q13635 1447 aa23.71■■□□□ 1.39
RTL8B-201ENST00000391440 SENP3-EIF4A1A0A087X0R7 540 aa23.71■■□□□ 1.39
RTL8B-201ENST00000391440 CCDC61Q9Y6R9 512 aa23.71■■□□□ 1.39
RTL8B-201ENST00000391440 NPHP4O75161 1426 aaPredicted RBP23.7■■□□□ 1.38
RTL8B-201ENST00000391440 PPIP5K1Q6PFW1 1433 aa23.69■■□□□ 1.38
RTL8B-201ENST00000391440 PRR36Q9H6K5 1346 aa23.69■■□□□ 1.38
RTL8B-201ENST00000391440 GGNBP2Q9H3C7 697 aa23.67■■□□□ 1.38
RTL8B-201ENST00000391440 GTF3C3Q9Y5Q9 886 aa23.67■■□□□ 1.38
RTL8B-201ENST00000391440 XRN1Q8IZH2 1706 aaKnown RBP23.66■■□□□ 1.38
RTL8B-201ENST00000391440 SCAF1Q9H7N4 1312 aaKnown RBP23.66■■□□□ 1.38
RTL8B-201ENST00000391440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.66■■□□□ 1.38
RTL8B-201ENST00000391440 USP32Q8NFA0 1604 aa23.65■■□□□ 1.38
RTL8B-201ENST00000391440 FYB1O15117 783 aa23.65■■□□□ 1.38
RTL8B-201ENST00000391440 RBM33Q96EV2 1170 aaKnown RBP23.65■■□□□ 1.38
RTL8B-201ENST00000391440 ATP7BP35670 1465 aa23.64■■□□□ 1.37
RTL8B-201ENST00000391440 HSPA2P54652 639 aa23.64■■□□□ 1.37
RTL8B-201ENST00000391440 ADGRB2O60241 1585 aa23.63■■□□□ 1.37
RTL8B-201ENST00000391440 NSD2O96028 1365 aa23.63■■□□□ 1.37
RTL8B-201ENST00000391440 ZBED9Q6R2W3 1325 aa23.62■■□□□ 1.37
RTL8B-201ENST00000391440 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
RTL8B-201ENST00000391440 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
RTL8B-201ENST00000391440 CPSF1Q10570 1443 aaKnown RBP23.6■■□□□ 1.37
RTL8B-201ENST00000391440 WDR43Q15061 677 aaKnown RBP eCLIP23.6■■□□□ 1.37
RTL8B-201ENST00000391440 MTHFSP49914 203 aa23.57■■□□□ 1.36
RTL8B-201ENST00000391440 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
RTL8B-201ENST00000391440 ACEP12821 1306 aa23.56■■□□□ 1.36
RTL8B-201ENST00000391440 PMFBP1Q8TBY8 1022 aa23.55■■□□□ 1.36
RTL8B-201ENST00000391440 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
RTL8B-201ENST00000391440 CDC42BPGQ6DT37 1551 aa23.55■■□□□ 1.36
RTL8B-201ENST00000391440 PLEKHG3A1L390 1219 aa23.55■■□□□ 1.36
RTL8B-201ENST00000391440 EDC4Q6P2E9 1401 aaKnown RBP23.54■■□□□ 1.36
RTL8B-201ENST00000391440 NME9Q86XW9 330 aa23.54■■□□□ 1.36
RTL8B-201ENST00000391440 C14orf37Q86TY3 774 aa23.53■■□□□ 1.36
RTL8B-201ENST00000391440 POLR3AO14802 1390 aaPredicted RBP23.52■■□□□ 1.36
RTL8B-201ENST00000391440 ZRANB1Q9UGI0 708 aa23.52■■□□□ 1.36
RTL8B-201ENST00000391440 NKTRP30414 1462 aaKnown RBP23.5■■□□□ 1.35
RTL8B-201ENST00000391440 FBLN1P23142 703 aa23.49■■□□□ 1.35
RTL8B-201ENST00000391440 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
RTL8B-201ENST00000391440 NGDNQ8NEJ9 315 aaKnown RBP23.49■■□□□ 1.35
RTL8B-201ENST00000391440 TOPAZ1Q8N9V7 1692 aa23.49■■□□□ 1.35
RTL8B-201ENST00000391440 BLMP54132 1417 aaPredicted RBP23.49■■□□□ 1.35
RTL8B-201ENST00000391440 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
RTL8B-201ENST00000391440 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
RTL8B-201ENST00000391440 ITSN1Q15811 1721 aa23.47■■□□□ 1.35
RTL8B-201ENST00000391440 INSRP06213 1382 aa23.46■■□□□ 1.35
RTL8B-201ENST00000391440 RGPD8O14715 1765 aaPredicted RBP23.46■■□□□ 1.35
RTL8B-201ENST00000391440 AKAP12Q02952 1782 aa23.46■■□□□ 1.35
RTL8B-201ENST00000391440 CCDC146Q8IYE0 955 aa23.46■■□□□ 1.35
RTL8B-201ENST00000391440 MON2Q7Z3U7 1717 aa23.46■■□□□ 1.35
RTL8B-201ENST00000391440 TTC21BQ7Z4L5 1316 aa23.46■■□□□ 1.35
RTL8B-201ENST00000391440 LMTK3Q96Q04 1460 aa23.46■■□□□ 1.35
RTL8B-201ENST00000391440 NALCNQ8IZF0 1738 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms