RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 TSKSQ9UJT2 592 aa3.33□□□□□ -1.88
TRAJ42-201ENST00000390495 CELA2BP08218 269 aaPredicted RBP3.3□□□□□ -1.88
TRAJ42-201ENST00000390495 LRP8Q14114 963 aa3.3□□□□□ -1.88
TRAJ42-201ENST00000390495 DOC2BQ14184 412 aa3.29□□□□□ -1.88
TRAJ42-201ENST00000390495 ALYREFQ86V81 257 aaKnown RBP3.29□□□□□ -1.88
TRAJ42-201ENST00000390495 SLF2Q8IX21 1173 aa3.29□□□□□ -1.88
TRAJ42-201ENST00000390495 PHF14O94880 888 aa3.28□□□□□ -1.88
TRAJ42-201ENST00000390495 ADAMTS2O95450 1211 aa3.28□□□□□ -1.88
TRAJ42-201ENST00000390495 REPIN1Q9BWE0 567 aaKnown RBP3.28□□□□□ -1.88
TRAJ42-201ENST00000390495 MAN1A2O60476 641 aa3.27□□□□□ -1.89
TRAJ42-201ENST00000390495 SCARF1Q14162 830 aa3.27□□□□□ -1.89
TRAJ42-201ENST00000390495 FCF1Q9Y324 198 aaKnown RBP3.27□□□□□ -1.89
TRAJ42-201ENST00000390495 RNF114Q9Y508 228 aa3.27□□□□□ -1.89
TRAJ42-201ENST00000390495 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
TRAJ42-201ENST00000390495 ZBTB24O43167 697 aaPredicted RBP3.26□□□□□ -1.89
TRAJ42-201ENST00000390495 HYAL3O43820 417 aaPredicted RBP3.26□□□□□ -1.89
TRAJ42-201ENST00000390495 NEDD1Q8NHV4 660 aa3.25□□□□□ -1.89
TRAJ42-201ENST00000390495 PURBQ96QR8 312 aaKnown RBP3.25□□□□□ -1.89
TRAJ42-201ENST00000390495 C1QTNF9BB2RNN3 333 aa3.24□□□□□ -1.89
TRAJ42-201ENST00000390495 VGFO15240 615 aaPredicted RBP3.24□□□□□ -1.89
TRAJ42-201ENST00000390495 PSPNO60542 156 aa3.24□□□□□ -1.89
TRAJ42-201ENST00000390495 MRPL14Q6P1L8 145 aaKnown RBP3.24□□□□□ -1.89
TRAJ42-201ENST00000390495 NANOS1Q8WY41 292 aaKnown RBP3.24□□□□□ -1.89
TRAJ42-201ENST00000390495 PNMA3Q9UL41 463 aa3.24□□□□□ -1.89
TRAJ42-201ENST00000390495 ALDH1A1P00352 501 aa3.23□□□□□ -1.89
TRAJ42-201ENST00000390495 SLC4A3P48751 1232 aa3.23□□□□□ -1.89
TRAJ42-201ENST00000390495 TATDN2Q93075 761 aa3.23□□□□□ -1.89
TRAJ42-201ENST00000390495 NBPF26B4DH59 902 aa3.22□□□□□ -1.89
TRAJ42-201ENST00000390495 RIOK3O14730 519 aaKnown RBP3.22□□□□□ -1.89
TRAJ42-201ENST00000390495 LSRQ86X29 649 aaPredicted RBP3.22□□□□□ -1.89
TRAJ42-201ENST00000390495 C3orf80F5H4A9 247 aa3.21□□□□□ -1.9
TRAJ42-201ENST00000390495 SRSF11Q05519 484 aaKnown RBP3.21□□□□□ -1.9
TRAJ42-201ENST00000390495 SWT1Q5T5J6 900 aaKnown RBP3.21□□□□□ -1.9
TRAJ42-201ENST00000390495 NR1I2O75469 434 aa3.2□□□□□ -1.9
TRAJ42-201ENST00000390495 COL8A1P27658 744 aa3.2□□□□□ -1.9
TRAJ42-201ENST00000390495 RSPO4Q2I0M5 234 aaPredicted RBP3.2□□□□□ -1.9
TRAJ42-201ENST00000390495 FBLN7Q53RD9 439 aa3.2□□□□□ -1.9
TRAJ42-201ENST00000390495 CD163Q86VB7 1156 aa3.2□□□□□ -1.9
TRAJ42-201ENST00000390495 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
TRAJ42-201ENST00000390495 PPP1R37O75864 691 aa3.19□□□□□ -1.9
TRAJ42-201ENST00000390495 TRIM41Q8WV44 630 aa3.19□□□□□ -1.9
TRAJ42-201ENST00000390495 EPAS1Q99814 870 aa3.19□□□□□ -1.9
TRAJ42-201ENST00000390495 TRIM32Q13049 653 aa3.18□□□□□ -1.9
TRAJ42-201ENST00000390495 BCL11BQ9C0K0 894 aaPredicted RBP3.18□□□□□ -1.9
TRAJ42-201ENST00000390495 MAP3K9P80192 1104 aa3.17□□□□□ -1.9
TRAJ42-201ENST00000390495 RBM33Q96EV2 1170 aaKnown RBP3.17□□□□□ -1.9
TRAJ42-201ENST00000390495 CDCA7LQ96GN5 454 aa3.17□□□□□ -1.9
TRAJ42-201ENST00000390495 SPSB2Q99619 263 aa3.17□□□□□ -1.9
TRAJ42-201ENST00000390495 FAM198AQ9UFP1 575 aa3.17□□□□□ -1.9
TRAJ42-201ENST00000390495 ACTN4O43707 911 aaKnown RBP3.16□□□□□ -1.9
TRAJ42-201ENST00000390495 RGS19P49795 217 aa3.16□□□□□ -1.9
TRAJ42-201ENST00000390495 PRSS36Q5K4E3 855 aa3.16□□□□□ -1.9
TRAJ42-201ENST00000390495 NKAPLQ5M9Q1 402 aa3.16□□□□□ -1.9
TRAJ42-201ENST00000390495 SH3RF1Q7Z6J0 888 aa3.16□□□□□ -1.9
TRAJ42-201ENST00000390495 WASF2Q9Y6W5 498 aa3.16□□□□□ -1.9
TRAJ42-201ENST00000390495 CHRNA4P43681 627 aa3.15□□□□□ -1.91
TRAJ42-201ENST00000390495 IRAK1P51617 712 aa3.15□□□□□ -1.91
TRAJ42-201ENST00000390495 DYRK3O43781 588 aa3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 BCRP11274 1271 aa3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 TAL1P17542 331 aaPredicted RBP3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 GRIN2CQ14957 1233 aa3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 RC3H1Q5TC82 1133 aaKnown RBP3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 NUDT18Q6ZVK8 323 aa3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 SV2AQ7L0J3 742 aa3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 VWA5B2Q8N398 1253 aa3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 STK24Q9Y6E0 443 aa3.14□□□□□ -1.91
TRAJ42-201ENST00000390495 PRSS12P56730 875 aa3.13□□□□□ -1.91
TRAJ42-201ENST00000390495 KMT5BQ4FZB7 885 aa3.13□□□□□ -1.91
TRAJ42-201ENST00000390495 PPP1R15BQ5SWA1 713 aa3.13□□□□□ -1.91
TRAJ42-201ENST00000390495 MKL2Q9ULH7 1088 aa3.13□□□□□ -1.91
TRAJ42-201ENST00000390495 JAG2Q9Y219 1238 aa3.13□□□□□ -1.91
TRAJ42-201ENST00000390495 CDC14CA4D256 554 aa3.12□□□□□ -1.91
TRAJ42-201ENST00000390495 GATA4P43694 442 aa3.12□□□□□ -1.91
TRAJ42-201ENST00000390495 SNRPNP63162 240 aaKnown RBP3.12□□□□□ -1.91
TRAJ42-201ENST00000390495 WDR26Q9H7D7 661 aa3.12□□□□□ -1.91
TRAJ42-201ENST00000390495 NCANO14594 1321 aa3.12□□□□□ -1.91
TRAJ42-201ENST00000390495 SCUBE3Q8IX30 993 aa3.11□□□□□ -1.91
TRAJ42-201ENST00000390495 RNF25Q96BH1 459 aaPredicted RBP3.11□□□□□ -1.91
TRAJ42-201ENST00000390495 PRRG2O14669 202 aa3.1□□□□□ -1.91
TRAJ42-201ENST00000390495 PTSQ03393 145 aa3.1□□□□□ -1.91
TRAJ42-201ENST00000390495 ELNP15502 786 aa3.09□□□□□ -1.91
TRAJ42-201ENST00000390495 C6orf118Q5T5N4 469 aa3.09□□□□□ -1.91
TRAJ42-201ENST00000390495 DNMT3LQ9UJW3 386 aa3.09□□□□□ -1.91
TRAJ42-201ENST00000390495 CCDC155Q8N6L0 562 aa3.08□□□□□ -1.92
TRAJ42-201ENST00000390495 SPOCK2Q92563 424 aa3.08□□□□□ -1.92
TRAJ42-201ENST00000390495 TSR1Q2NL82 804 aaKnown RBP3.07□□□□□ -1.92
TRAJ42-201ENST00000390495 ITGA6P23229 1130 aa3.06□□□□□ -1.92
TRAJ42-201ENST00000390495 WNT7BP56706 349 aa3.06□□□□□ -1.92
TRAJ42-201ENST00000390495 SKOR1P84550 965 aa3.06□□□□□ -1.92
TRAJ42-201ENST00000390495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.06□□□□□ -1.92
TRAJ42-201ENST00000390495 SPOCD1Q6ZMY3 1216 aa3.06□□□□□ -1.92
TRAJ42-201ENST00000390495 LRRC4BQ9NT99 713 aa3.06□□□□□ -1.92
TRAJ42-201ENST00000390495 SOS2Q07890 1332 aaPredicted RBP3.05□□□□□ -1.92
TRAJ42-201ENST00000390495 SIAH2O43255 324 aa3.05□□□□□ -1.92
TRAJ42-201ENST00000390495 C8AP07357 584 aa3.05□□□□□ -1.92
TRAJ42-201ENST00000390495 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
TRAJ42-201ENST00000390495 SUV39H2Q9H5I1 410 aa3.05□□□□□ -1.92
TRAJ42-201ENST00000390495 B8ZZF3 427 aa3.04□□□□□ -1.92
TRAJ42-201ENST00000390495 CFHP08603 1231 aa3.04□□□□□ -1.92
TRAJ42-201ENST00000390495 TIMP2P16035 220 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms