RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 XPCQ01831 940 aaPredicted RBP9.86□□□□□ -0.83
TRAV1-2-201ENST00000390423 PXDNQ92626 1479 aa9.85□□□□□ -0.83
TRAV1-2-201ENST00000390423 SF3B2Q13435 895 aaKnown RBP9.85□□□□□ -0.83
TRAV1-2-201ENST00000390423 SEPT12Q8IYM1 358 aa9.85□□□□□ -0.83
TRAV1-2-201ENST00000390423 SLIT2O94813 1529 aa9.85□□□□□ -0.83
TRAV1-2-201ENST00000390423 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
TRAV1-2-201ENST00000390423 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
TRAV1-2-201ENST00000390423 YY1P25490 414 aa9.84□□□□□ -0.83
TRAV1-2-201ENST00000390423 LOC105371045A0A1W2PR82 267 aa9.83□□□□□ -0.84
TRAV1-2-201ENST00000390423 R3HDM1Q15032 1099 aaKnown RBP9.83□□□□□ -0.84
TRAV1-2-201ENST00000390423 UNC5CLQ8IV45 518 aa9.83□□□□□ -0.84
TRAV1-2-201ENST00000390423 USP32Q8NFA0 1604 aa9.81□□□□□ -0.84
TRAV1-2-201ENST00000390423 NEXMIFQ5QGS0 1516 aa9.81□□□□□ -0.84
TRAV1-2-201ENST00000390423 FOXO3O43524 673 aa9.8□□□□□ -0.84
TRAV1-2-201ENST00000390423 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
TRAV1-2-201ENST00000390423 ZNF326Q5BKZ1 582 aaKnown RBP9.8□□□□□ -0.84
TRAV1-2-201ENST00000390423 KRT27Q7Z3Y8 459 aa9.8□□□□□ -0.84
TRAV1-2-201ENST00000390423 PLCH1Q4KWH8 1693 aa9.8□□□□□ -0.84
TRAV1-2-201ENST00000390423 NPHP3Q7Z494 1330 aa9.8□□□□□ -0.84
TRAV1-2-201ENST00000390423 BAG6P46379 1132 aa9.79□□□□□ -0.84
TRAV1-2-201ENST00000390423 ESCO1Q5FWF5 840 aa9.79□□□□□ -0.84
TRAV1-2-201ENST00000390423 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
TRAV1-2-201ENST00000390423 VPS72Q15906 364 aa9.78□□□□□ -0.84
TRAV1-2-201ENST00000390423 FAM182BQ5T319 152 aa9.78□□□□□ -0.84
TRAV1-2-201ENST00000390423 TNS1Q9HBL0 1735 aaKnown RBP9.77□□□□□ -0.85
TRAV1-2-201ENST00000390423 CDC42BPGQ6DT37 1551 aa9.77□□□□□ -0.85
TRAV1-2-201ENST00000390423 NUTM2FA1L443 756 aa9.77□□□□□ -0.85
TRAV1-2-201ENST00000390423 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.85
TRAV1-2-201ENST00000390423 CCDC9Q9Y3X0 531 aaKnown RBP9.77□□□□□ -0.85
TRAV1-2-201ENST00000390423 RGPD1P0DJD0 1748 aa9.76□□□□□ -0.85
TRAV1-2-201ENST00000390423 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
TRAV1-2-201ENST00000390423 FAM50AQ14320 339 aaKnown RBP9.76□□□□□ -0.85
TRAV1-2-201ENST00000390423 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
TRAV1-2-201ENST00000390423 SPATA31A3Q5VYP0 1347 aa9.76□□□□□ -0.85
TRAV1-2-201ENST00000390423 PRAG1Q86YV5 1406 aa9.75□□□□□ -0.85
TRAV1-2-201ENST00000390423 A0A0G2JS52 829 aa9.75□□□□□ -0.85
TRAV1-2-201ENST00000390423 MYT1Q01538 1121 aa9.75□□□□□ -0.85
TRAV1-2-201ENST00000390423 EZH2Q15910 746 aaKnown RBP9.75□□□□□ -0.85
TRAV1-2-201ENST00000390423 ABCA3Q99758 1704 aa9.75□□□□□ -0.85
TRAV1-2-201ENST00000390423 NWD2Q9ULI1 1742 aa9.75□□□□□ -0.85
TRAV1-2-201ENST00000390423 NUP155O75694 1391 aa9.75□□□□□ -0.85
TRAV1-2-201ENST00000390423 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
TRAV1-2-201ENST00000390423 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
TRAV1-2-201ENST00000390423 HFM1A2PYH4 1435 aa9.73□□□□□ -0.85
TRAV1-2-201ENST00000390423 DISP2A7MBM2 1401 aa9.73□□□□□ -0.85
TRAV1-2-201ENST00000390423 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
TRAV1-2-201ENST00000390423 NAIPQ13075 1403 aa9.73□□□□□ -0.85
TRAV1-2-201ENST00000390423 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
TRAV1-2-201ENST00000390423 FAM83GA6ND36 823 aa9.71□□□□□ -0.86
TRAV1-2-201ENST00000390423 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
TRAV1-2-201ENST00000390423 LRPPRCP42704 1394 aaKnown RBP9.71□□□□□ -0.86
TRAV1-2-201ENST00000390423 SENP3-EIF4A1A0A087X0R7 540 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 KRT28Q7Z3Y7 464 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 WAPLQ7Z5K2 1190 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 CAMKK2Q96RR4 588 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 CCDC144AA2RUR9 1427 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 TNS3Q68CZ2 1445 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 KIF1AQ12756 1690 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 THSD7AQ9UPZ6 1657 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 FMN2Q9NZ56 1722 aa9.7□□□□□ -0.86
TRAV1-2-201ENST00000390423 RREB1Q92766 1687 aa9.69□□□□□ -0.86
TRAV1-2-201ENST00000390423 PLEKHH1Q9ULM0 1364 aa9.69□□□□□ -0.86
TRAV1-2-201ENST00000390423 KIF1BO60333 1816 aa9.68□□□□□ -0.86
TRAV1-2-201ENST00000390423 RGPD8O14715 1765 aaPredicted RBP9.68□□□□□ -0.86
TRAV1-2-201ENST00000390423 ADGRB2O60241 1585 aa9.68□□□□□ -0.86
TRAV1-2-201ENST00000390423 ROCK1Q13464 1354 aa9.68□□□□□ -0.86
TRAV1-2-201ENST00000390423 TRIM37O94972 964 aa9.68□□□□□ -0.86
TRAV1-2-201ENST00000390423 ZNF784Q8NCA9 323 aaPredicted RBP9.68□□□□□ -0.86
TRAV1-2-201ENST00000390423 APLP2Q06481 763 aa9.67□□□□□ -0.86
TRAV1-2-201ENST00000390423 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
TRAV1-2-201ENST00000390423 STK26Q9P289 416 aa9.67□□□□□ -0.86
TRAV1-2-201ENST00000390423 NINLQ9Y2I6 1382 aa9.66□□□□□ -0.86
TRAV1-2-201ENST00000390423 PPLO60437 1756 aa9.66□□□□□ -0.86
TRAV1-2-201ENST00000390423 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
TRAV1-2-201ENST00000390423 PPP1R1BQ9UD71 204 aaPredicted RBP9.66□□□□□ -0.86
TRAV1-2-201ENST00000390423 SPATA31A5Q5VU36 1347 aa9.65□□□□□ -0.86
TRAV1-2-201ENST00000390423 SPATA31A7Q8IWB4 1347 aa9.65□□□□□ -0.86
TRAV1-2-201ENST00000390423 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.86
TRAV1-2-201ENST00000390423 APBA3O96018 575 aa9.65□□□□□ -0.86
TRAV1-2-201ENST00000390423 IFT172Q9UG01 1749 aa9.65□□□□□ -0.87
TRAV1-2-201ENST00000390423 TECPR2O15040 1411 aa9.65□□□□□ -0.87
TRAV1-2-201ENST00000390423 UTRNP46939 3433 aa9.64□□□□□ -0.87
TRAV1-2-201ENST00000390423 COL14A1Q05707 1796 aaKnown RBP9.64□□□□□ -0.87
TRAV1-2-201ENST00000390423 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 KCNQ2O43526 872 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 ITGAEP38570 1179 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 C1QTNF8P60827 252 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 SPON1Q9HCB6 807 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 NRXN1Q9ULB1 1477 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 NRKQ7Z2Y5 1582 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
TRAV1-2-201ENST00000390423 KNDC1Q76NI1 1749 aa9.62□□□□□ -0.87
TRAV1-2-201ENST00000390423 DCAF8L1A6NGE4 600 aa9.62□□□□□ -0.87
TRAV1-2-201ENST00000390423 TMEM132EQ6IEE7 984 aa9.62□□□□□ -0.87
TRAV1-2-201ENST00000390423 TRPM3Q9HCF6 1732 aaPredicted RBP9.62□□□□□ -0.87
TRAV1-2-201ENST00000390423 MYOM1P52179 1685 aa9.61□□□□□ -0.87
TRAV1-2-201ENST00000390423 ADGRF5Q8IZF2 1346 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms