RNA–Protein interactions for RNA: ENST00000389385.8

RPH3A-201, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPH3A, Length 4,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-201ENST00000389385 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
RPH3A-201ENST00000389385 HOMER1Q86YM7 354 aa13.94□□□□□ -0.18
RPH3A-201ENST00000389385 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 ZNF330Q9Y3S2 320 aaPredicted RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 INTS3Q68E01 1043 aaKnown RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 RASSF8Q8NHQ8 419 aa13.93□□□□□ -0.18
RPH3A-201ENST00000389385 IFT57Q9NWB7 429 aa13.93□□□□□ -0.18
RPH3A-201ENST00000389385 ZKSCAN1P17029 563 aaPredicted RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 TPM1P09493 284 aa13.93□□□□□ -0.18
RPH3A-201ENST00000389385 TSR1Q2NL82 804 aaKnown RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 ZNF608Q9ULD9 1512 aaPredicted RBP13.93□□□□□ -0.18
RPH3A-201ENST00000389385 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
RPH3A-201ENST00000389385 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
RPH3A-201ENST00000389385 ARGLU1Q9NWB6 273 aaPredicted RBP13.92□□□□□ -0.18
RPH3A-201ENST00000389385 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
RPH3A-201ENST00000389385 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
RPH3A-201ENST00000389385 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
RPH3A-201ENST00000389385 RNF214Q8ND24 703 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 PANK1Q8TE04 598 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 ANO2Q9NQ90 1003 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 CHMP3Q9Y3E7 222 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 CLSTN1O94985 981 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 MBD3O95983 291 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 RRP9O43818 475 aaKnown RBP13.91□□□□□ -0.18
RPH3A-201ENST00000389385 CCDC70Q6NSX1 233 aa13.91□□□□□ -0.18
RPH3A-201ENST00000389385 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
RPH3A-201ENST00000389385 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
RPH3A-201ENST00000389385 TPD52L1Q16890 204 aaPredicted RBP13.9□□□□□ -0.18
RPH3A-201ENST00000389385 SMC3Q9UQE7 1217 aa13.9□□□□□ -0.18
RPH3A-201ENST00000389385 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.19
RPH3A-201ENST00000389385 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.19
RPH3A-201ENST00000389385 RUNDC1Q96C34 613 aa13.9□□□□□ -0.19
RPH3A-201ENST00000389385 GGNBP2Q9H3C7 697 aa13.9□□□□□ -0.19
RPH3A-201ENST00000389385 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
RPH3A-201ENST00000389385 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
RPH3A-201ENST00000389385 VPS37CA5D8V6 355 aaPredicted RBP13.89□□□□□ -0.19
RPH3A-201ENST00000389385 ROCK1Q13464 1354 aa13.89□□□□□ -0.19
RPH3A-201ENST00000389385 MNS1Q8NEH6 495 aa13.88□□□□□ -0.19
RPH3A-201ENST00000389385 PES1O00541 588 aaKnown RBP13.88□□□□□ -0.19
RPH3A-201ENST00000389385 MSH5O43196 834 aa13.88□□□□□ -0.19
RPH3A-201ENST00000389385 CDC45O75419 566 aa13.88□□□□□ -0.19
RPH3A-201ENST00000389385 ESPNB1AK53 854 aa13.88□□□□□ -0.19
RPH3A-201ENST00000389385 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
RPH3A-201ENST00000389385 RBM10P98175 930 aaKnown RBP13.87□□□□□ -0.19
RPH3A-201ENST00000389385 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
RPH3A-201ENST00000389385 CPLX2Q6PUV4 134 aaKnown RBP13.87□□□□□ -0.19
RPH3A-201ENST00000389385 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
RPH3A-201ENST00000389385 NOM1Q5C9Z4 860 aaKnown RBP13.86□□□□□ -0.19
RPH3A-201ENST00000389385 GRPEL1Q9HAV7 217 aa13.86□□□□□ -0.19
RPH3A-201ENST00000389385 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
RPH3A-201ENST00000389385 IPO7O95373 1038 aaKnown RBP13.86□□□□□ -0.19
RPH3A-201ENST00000389385 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
RPH3A-201ENST00000389385 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
RPH3A-201ENST00000389385 RIPK4P57078 832 aa13.85□□□□□ -0.19
RPH3A-201ENST00000389385 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
RPH3A-201ENST00000389385 TOMM22Q9NS69 142 aa13.85□□□□□ -0.19
RPH3A-201ENST00000389385 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
RPH3A-201ENST00000389385 PSME1Q06323 249 aa13.85□□□□□ -0.19
RPH3A-201ENST00000389385 PDZRN3Q9UPQ7 1066 aa13.85□□□□□ -0.19
RPH3A-201ENST00000389385 CCDC73Q6ZRK6 1079 aa13.84□□□□□ -0.19
RPH3A-201ENST00000389385 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
RPH3A-201ENST00000389385 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
RPH3A-201ENST00000389385 ABCC5O15440 1437 aa13.84□□□□□ -0.19
RPH3A-201ENST00000389385 HSP90B2PQ58FF3 399 aa13.84□□□□□ -0.19
RPH3A-201ENST00000389385 TXNDC2Q86VQ3 553 aa13.84□□□□□ -0.19
RPH3A-201ENST00000389385 ACBD3Q9H3P7 528 aa13.84□□□□□ -0.19
RPH3A-201ENST00000389385 MTHFSP49914 203 aa13.83□□□□□ -0.2
RPH3A-201ENST00000389385 MCM4P33991 863 aa13.83□□□□□ -0.2
RPH3A-201ENST00000389385 TEFQ10587 303 aa13.83□□□□□ -0.2
RPH3A-201ENST00000389385 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
RPH3A-201ENST00000389385 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
RPH3A-201ENST00000389385 PRPF40AO75400 957 aaKnown RBP13.83□□□□□ -0.2
RPH3A-201ENST00000389385 LETM1O95202 739 aaPredicted RBP13.83□□□□□ -0.2
RPH3A-201ENST00000389385 TSPY26PQ9H489 355 aa13.82□□□□□ -0.2
RPH3A-201ENST00000389385 RABEP1Q15276 862 aa13.82□□□□□ -0.2
RPH3A-201ENST00000389385 SMG6Q86US8 1419 aaKnown RBP13.82□□□□□ -0.2
RPH3A-201ENST00000389385 CAMSAP2Q08AD1 1489 aa13.82□□□□□ -0.2
RPH3A-201ENST00000389385 SLC12A5Q9H2X9 1139 aa13.82□□□□□ -0.2
RPH3A-201ENST00000389385 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
RPH3A-201ENST00000389385 ANKRD20A12PQ8NF67 263 aa13.82□□□□□ -0.2
RPH3A-201ENST00000389385 CWC15Q9P013 229 aaKnown RBP13.81□□□□□ -0.2
RPH3A-201ENST00000389385 HMOX1P09601 288 aa13.81□□□□□ -0.2
RPH3A-201ENST00000389385 MCM2P49736 904 aa13.81□□□□□ -0.2
RPH3A-201ENST00000389385 PNISRQ8TF01 805 aaKnown RBP13.81□□□□□ -0.2
RPH3A-201ENST00000389385 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
RPH3A-201ENST00000389385 TRIM5Q9C035 493 aa13.8□□□□□ -0.2
RPH3A-201ENST00000389385 CPLX1O14810 134 aa13.8□□□□□ -0.2
RPH3A-201ENST00000389385 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
RPH3A-201ENST00000389385 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
RPH3A-201ENST00000389385 GNAI1P63096 354 aa13.8□□□□□ -0.2
RPH3A-201ENST00000389385 HOOK1Q9UJC3 728 aaKnown RBP13.8□□□□□ -0.2
RPH3A-201ENST00000389385 IFIT2P09913 472 aaKnown RBP13.79□□□□□ -0.2
RPH3A-201ENST00000389385 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
RPH3A-201ENST00000389385 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
RPH3A-201ENST00000389385 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
RPH3A-201ENST00000389385 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.79□□□□□ -0.2
RPH3A-201ENST00000389385 TRIM29Q14134 588 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms