RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 ZPR1O75312 459 aa7.06□□□□□ -1.28
RNU6-39P-201ENST00000384344 MTMR2Q13614 643 aa7.06□□□□□ -1.28
RNU6-39P-201ENST00000384344 PRPF38BQ5VTL8 546 aaKnown RBP7.06□□□□□ -1.28
RNU6-39P-201ENST00000384344 SCUBE3Q8IX30 993 aa7.06□□□□□ -1.28
RNU6-39P-201ENST00000384344 GUCA2AQ02747 115 aa7.05□□□□□ -1.28
RNU6-39P-201ENST00000384344 TJAP1Q5JTD0 557 aa7.05□□□□□ -1.28
RNU6-39P-201ENST00000384344 HLA-CQ95604 372 aa7.05□□□□□ -1.28
RNU6-39P-201ENST00000384344 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
RNU6-39P-201ENST00000384344 ITGBL1O95965 494 aaPredicted RBP7.04□□□□□ -1.28
RNU6-39P-201ENST00000384344 RETREG3Q86VR2 466 aa7.04□□□□□ -1.28
RNU6-39P-201ENST00000384344 SPSB2Q99619 263 aa7.04□□□□□ -1.28
RNU6-39P-201ENST00000384344 ADH1BP00325 375 aa7.03□□□□□ -1.28
RNU6-39P-201ENST00000384344 GGCXP38435 758 aa7.03□□□□□ -1.28
RNU6-39P-201ENST00000384344 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
RNU6-39P-201ENST00000384344 PROCA1Q8NCQ7 364 aaPredicted RBP7.03□□□□□ -1.28
RNU6-39P-201ENST00000384344 USB1Q9BQ65 265 aaKnown RBP7.03□□□□□ -1.28
RNU6-39P-201ENST00000384344 PCDHGC3Q9UN70 934 aa7.03□□□□□ -1.28
RNU6-39P-201ENST00000384344 HELBQ8NG08 1087 aaPredicted RBP7.02□□□□□ -1.29
RNU6-39P-201ENST00000384344 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.02□□□□□ -1.29
RNU6-39P-201ENST00000384344 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
RNU6-39P-201ENST00000384344 LILRB3O75022 631 aa7.01□□□□□ -1.29
RNU6-39P-201ENST00000384344 HRCP23327 699 aa7.01□□□□□ -1.29
RNU6-39P-201ENST00000384344 ZNF516Q92618 1163 aa7.01□□□□□ -1.29
RNU6-39P-201ENST00000384344 TLL1O43897 1013 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 QPCTQ16769 361 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 MSS51Q4VC12 460 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 RNF19BQ6ZMZ0 732 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 PRR7Q8TB68 274 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 CABLES1Q8TDN4 633 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 TSC1Q92574 1164 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 THAP11Q96EK4 314 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 SLC6A16Q9GZN6 736 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 PLA2G2EQ9NZK7 142 aa7□□□□□ -1.29
RNU6-39P-201ENST00000384344 TMEM259Q4ZIN3 620 aa6.99□□□□□ -1.29
RNU6-39P-201ENST00000384344 PPP2R2DQ66LE6 453 aa6.99□□□□□ -1.29
RNU6-39P-201ENST00000384344 IFFO2Q5TF58 517 aa6.98□□□□□ -1.29
RNU6-39P-201ENST00000384344 DESI1Q6ICB0 168 aa6.98□□□□□ -1.29
RNU6-39P-201ENST00000384344 SYMPKQ92797 1274 aaKnown RBP6.98□□□□□ -1.29
RNU6-39P-201ENST00000384344 APBB1O00213 710 aa6.97□□□□□ -1.29
RNU6-39P-201ENST00000384344 JUNDP17535 347 aa6.97□□□□□ -1.29
RNU6-39P-201ENST00000384344 RFC5P40937 340 aa6.97□□□□□ -1.29
RNU6-39P-201ENST00000384344 AP1G2O75843 785 aa6.96□□□□□ -1.3
RNU6-39P-201ENST00000384344 RTL5Q5HYW3 569 aaPredicted RBP6.96□□□□□ -1.3
RNU6-39P-201ENST00000384344 NKX2-3Q8TAU0 364 aa6.96□□□□□ -1.3
RNU6-39P-201ENST00000384344 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
RNU6-39P-201ENST00000384344 S1PR4O95977 384 aa6.95□□□□□ -1.3
RNU6-39P-201ENST00000384344 FAM160A2Q8N612 972 aaPredicted RBP6.95□□□□□ -1.3
RNU6-39P-201ENST00000384344 DXOO77932 396 aaKnown RBP6.94□□□□□ -1.3
RNU6-39P-201ENST00000384344 MMP16P51512 607 aa6.94□□□□□ -1.3
RNU6-39P-201ENST00000384344 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
RNU6-39P-201ENST00000384344 PTPRNQ16849 979 aa6.93□□□□□ -1.3
RNU6-39P-201ENST00000384344 PNMA1Q8ND90 353 aa6.93□□□□□ -1.3
RNU6-39P-201ENST00000384344 PRM3Q9NNZ6 103 aa6.93□□□□□ -1.3
RNU6-39P-201ENST00000384344 PRDM9Q9NQV7 894 aa6.93□□□□□ -1.3
RNU6-39P-201ENST00000384344 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.93□□□□□ -1.3
RNU6-39P-201ENST00000384344 CCNYL3P0C7X3 344 aa6.92□□□□□ -1.3
RNU6-39P-201ENST00000384344 FLIIQ13045 1269 aa6.92□□□□□ -1.3
RNU6-39P-201ENST00000384344 NUDT12Q9BQG2 462 aa6.92□□□□□ -1.3
RNU6-39P-201ENST00000384344 USP17L8P0C7I0 530 aa6.91□□□□□ -1.3
RNU6-39P-201ENST00000384344 PPP1R18Q6NYC8 613 aa6.91□□□□□ -1.3
RNU6-39P-201ENST00000384344 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
RNU6-39P-201ENST00000384344 CCDC24Q8N4L8 307 aa6.91□□□□□ -1.3
RNU6-39P-201ENST00000384344 ANKLE1Q8NAG6 615 aa6.91□□□□□ -1.3
RNU6-39P-201ENST00000384344 A0A0G2JS52 829 aa6.9□□□□□ -1.3
RNU6-39P-201ENST00000384344 ZBTB24O43167 697 aaPredicted RBP6.9□□□□□ -1.3
RNU6-39P-201ENST00000384344 CTHP32929 405 aa6.9□□□□□ -1.3
RNU6-39P-201ENST00000384344 CTDSPL2Q05D32 466 aa6.9□□□□□ -1.3
RNU6-39P-201ENST00000384344 FCF1Q9Y324 198 aaKnown RBP6.9□□□□□ -1.3
RNU6-39P-201ENST00000384344 GTF3C3Q9Y5Q9 886 aa6.9□□□□□ -1.3
RNU6-39P-201ENST00000384344 RNF223E7ERA6 249 aa6.89□□□□□ -1.31
RNU6-39P-201ENST00000384344 SOCS7O14512 581 aa6.88□□□□□ -1.31
RNU6-39P-201ENST00000384344 ARMC2Q8NEN0 867 aa6.88□□□□□ -1.31
RNU6-39P-201ENST00000384344 KCNH2Q12809 1159 aa6.87□□□□□ -1.31
RNU6-39P-201ENST00000384344 FBXO31Q5XUX0 539 aaPredicted RBP6.87□□□□□ -1.31
RNU6-39P-201ENST00000384344 EVA1BQ9NVM1 165 aa6.87□□□□□ -1.31
RNU6-39P-201ENST00000384344 PPEF1O14829 653 aaPredicted RBP6.86□□□□□ -1.31
RNU6-39P-201ENST00000384344 PER1O15534 1290 aaPredicted RBP6.86□□□□□ -1.31
RNU6-39P-201ENST00000384344 ERICH6Q7L0X2 663 aa6.86□□□□□ -1.31
RNU6-39P-201ENST00000384344 LRRN4Q8WUT4 740 aa6.86□□□□□ -1.31
RNU6-39P-201ENST00000384344 RAD21O60216 631 aa6.85□□□□□ -1.31
RNU6-39P-201ENST00000384344 RPIAP49247 311 aa6.85□□□□□ -1.31
RNU6-39P-201ENST00000384344 MCM6Q14566 821 aa6.85□□□□□ -1.31
RNU6-39P-201ENST00000384344 NBPF14Q5TI25 921 aa6.85□□□□□ -1.31
RNU6-39P-201ENST00000384344 CD2BP2O95400 341 aaKnown RBP6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 UBTFP17480 764 aaKnown RBP6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 WWC1Q8IX03 1113 aa6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 UNC93B1Q9H1C4 597 aa6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 SNRKQ9NRH2 765 aa6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 NDUFB9Q9Y6M9 179 aa6.84□□□□□ -1.31
RNU6-39P-201ENST00000384344 ZC3H4Q9UPT8 1303 aaKnown RBP6.83□□□□□ -1.32
RNU6-39P-201ENST00000384344 RGS20O76081 388 aa6.83□□□□□ -1.32
RNU6-39P-201ENST00000384344 SLC19A1P41440 591 aa6.83□□□□□ -1.32
RNU6-39P-201ENST00000384344 MTMR14Q8NCE2 650 aa6.83□□□□□ -1.32
RNU6-39P-201ENST00000384344 NR6A1Q15406 480 aa6.82□□□□□ -1.32
RNU6-39P-201ENST00000384344 GPKOWQ92917 476 aaPredicted RBP eCLIP6.82□□□□□ -1.322e-8■■■■■ 46.1
RNU6-39P-201ENST00000384344 FKBPLQ9UIM3 349 aa6.82□□□□□ -1.32
RNU6-39P-201ENST00000384344 TRIM32Q13049 653 aa6.81□□□□□ -1.32
RNU6-39P-201ENST00000384344 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms