RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.2□□□□□ -0.78
RNU6-40P-201ENST00000384254 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
RNU6-40P-201ENST00000384254 GUCA2AQ02747 115 aa10.19□□□□□ -0.78
RNU6-40P-201ENST00000384254 C1orf115Q9H7X2 142 aa10.19□□□□□ -0.78
RNU6-40P-201ENST00000384254 HLA-CQ95604 372 aa10.18□□□□□ -0.78
RNU6-40P-201ENST00000384254 ANKK1Q8NFD2 765 aa10.17□□□□□ -0.78
RNU6-40P-201ENST00000384254 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
RNU6-40P-201ENST00000384254 PCDHGC3Q9UN70 934 aa10.17□□□□□ -0.78
RNU6-40P-201ENST00000384254 ZNF330Q9Y3S2 320 aaPredicted RBP10.17□□□□□ -0.78
RNU6-40P-201ENST00000384254 ABL2P42684 1182 aa10.16□□□□□ -0.78
RNU6-40P-201ENST00000384254 CCDC97Q96F63 343 aaPredicted RBP10.16□□□□□ -0.78
RNU6-40P-201ENST00000384254 GDPD2Q9HCC8 539 aa10.16□□□□□ -0.78
RNU6-40P-201ENST00000384254 Q3C1V9 767 aa10.15□□□□□ -0.78
RNU6-40P-201ENST00000384254 FNBP4Q8N3X1 1017 aaPredicted RBP10.15□□□□□ -0.78
RNU6-40P-201ENST00000384254 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
RNU6-40P-201ENST00000384254 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
RNU6-40P-201ENST00000384254 NDUFB9Q9Y6M9 179 aa10.14□□□□□ -0.79
RNU6-40P-201ENST00000384254 ACTN4O43707 911 aaKnown RBP10.13□□□□□ -0.79
RNU6-40P-201ENST00000384254 PPP4CP60510 307 aa10.13□□□□□ -0.79
RNU6-40P-201ENST00000384254 SERPINA10Q9UK55 444 aa10.12□□□□□ -0.79
RNU6-40P-201ENST00000384254 TBC1D2BQ9UPU7 963 aa10.12□□□□□ -0.79
RNU6-40P-201ENST00000384254 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
RNU6-40P-201ENST00000384254 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
RNU6-40P-201ENST00000384254 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
RNU6-40P-201ENST00000384254 HRO43593 1189 aa10.1□□□□□ -0.79
RNU6-40P-201ENST00000384254 PRR7Q8TB68 274 aa10.1□□□□□ -0.79
RNU6-40P-201ENST00000384254 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
RNU6-40P-201ENST00000384254 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
RNU6-40P-201ENST00000384254 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
RNU6-40P-201ENST00000384254 MORN1Q5T089 497 aa10.09□□□□□ -0.79
RNU6-40P-201ENST00000384254 RETREG3Q86VR2 466 aa10.09□□□□□ -0.79
RNU6-40P-201ENST00000384254 WNT2BQ93097 391 aa10.09□□□□□ -0.79
RNU6-40P-201ENST00000384254 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
RNU6-40P-201ENST00000384254 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
RNU6-40P-201ENST00000384254 PNMA1Q8ND90 353 aa10.07□□□□□ -0.8
RNU6-40P-201ENST00000384254 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
RNU6-40P-201ENST00000384254 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
RNU6-40P-201ENST00000384254 BCAMP50895 628 aa10.06□□□□□ -0.8
RNU6-40P-201ENST00000384254 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
RNU6-40P-201ENST00000384254 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
RNU6-40P-201ENST00000384254 CALR3Q96L12 384 aaKnown RBP10.06□□□□□ -0.8
RNU6-40P-201ENST00000384254 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
RNU6-40P-201ENST00000384254 NR1I2O75469 434 aa10.05□□□□□ -0.8
RNU6-40P-201ENST00000384254 LRRN4Q8WUT4 740 aa10.05□□□□□ -0.8
RNU6-40P-201ENST00000384254 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
RNU6-40P-201ENST00000384254 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
RNU6-40P-201ENST00000384254 DESI1Q6ICB0 168 aa10.04□□□□□ -0.8
RNU6-40P-201ENST00000384254 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.81
RNU6-40P-201ENST00000384254 APLP1P51693 650 aa10.02□□□□□ -0.81
RNU6-40P-201ENST00000384254 USB1Q9BQ65 265 aaKnown RBP10.02□□□□□ -0.81
RNU6-40P-201ENST00000384254 LCE2DQ5TA82 110 aaPredicted RBP10.01□□□□□ -0.81
RNU6-40P-201ENST00000384254 GLMNQ92990 594 aa10.01□□□□□ -0.81
RNU6-40P-201ENST00000384254 TRIM34Q9BYJ4 488 aa10.01□□□□□ -0.81
RNU6-40P-201ENST00000384254 SALL2Q9Y467 1007 aaPredicted RBP10.01□□□□□ -0.81
RNU6-40P-201ENST00000384254 RNF19BQ6ZMZ0 732 aa10□□□□□ -0.81
RNU6-40P-201ENST00000384254 NR6A1Q15406 480 aa9.99□□□□□ -0.81
RNU6-40P-201ENST00000384254 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
RNU6-40P-201ENST00000384254 POM121CA8CG34 1229 aa9.98□□□□□ -0.81
RNU6-40P-201ENST00000384254 BRICD5Q6PL45 260 aa9.98□□□□□ -0.81
RNU6-40P-201ENST00000384254 SCUBE3Q8IX30 993 aa9.98□□□□□ -0.81
RNU6-40P-201ENST00000384254 PER1O15534 1290 aaPredicted RBP9.97□□□□□ -0.81
RNU6-40P-201ENST00000384254 IRF5Q13568 498 aa9.97□□□□□ -0.81
RNU6-40P-201ENST00000384254 LYPD8Q6UX82 237 aa9.97□□□□□ -0.81
RNU6-40P-201ENST00000384254 VAC14Q08AM6 782 aa9.96□□□□□ -0.82
RNU6-40P-201ENST00000384254 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
RNU6-40P-201ENST00000384254 HDGFL1Q5TGJ6 251 aa9.95□□□□□ -0.82
RNU6-40P-201ENST00000384254 NYAP1Q6ZVC0 841 aa9.95□□□□□ -0.82
RNU6-40P-201ENST00000384254 EPS8L1Q8TE68 723 aa9.95□□□□□ -0.82
RNU6-40P-201ENST00000384254 PDIA4P13667 645 aaKnown RBP9.94□□□□□ -0.82
RNU6-40P-201ENST00000384254 JUNDP17535 347 aa9.94□□□□□ -0.82
RNU6-40P-201ENST00000384254 SOX11P35716 441 aa9.94□□□□□ -0.82
RNU6-40P-201ENST00000384254 THSD4Q6ZMP0 1018 aa9.94□□□□□ -0.82
RNU6-40P-201ENST00000384254 PTPRNQ16849 979 aa9.93□□□□□ -0.82
RNU6-40P-201ENST00000384254 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
RNU6-40P-201ENST00000384254 CTHP32929 405 aa9.92□□□□□ -0.82
RNU6-40P-201ENST00000384254 COPS2P61201 443 aa9.92□□□□□ -0.82
RNU6-40P-201ENST00000384254 SEMA3FQ13275 785 aa9.92□□□□□ -0.82
RNU6-40P-201ENST00000384254 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
RNU6-40P-201ENST00000384254 SPSB2Q99619 263 aa9.92□□□□□ -0.82
RNU6-40P-201ENST00000384254 GPR37L1O60883 481 aa9.91□□□□□ -0.82
RNU6-40P-201ENST00000384254 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.82
RNU6-40P-201ENST00000384254 MSS51Q4VC12 460 aa9.91□□□□□ -0.82
RNU6-40P-201ENST00000384254 PPP1R15AO75807 674 aaPredicted RBP9.9□□□□□ -0.82
RNU6-40P-201ENST00000384254 FKBPLQ9UIM3 349 aa9.9□□□□□ -0.82
RNU6-40P-201ENST00000384254 ACIN1Q9UKV3 1341 aaKnown RBP9.89□□□□□ -0.83
RNU6-40P-201ENST00000384254 ZC3H4Q9UPT8 1303 aaKnown RBP9.89□□□□□ -0.83
RNU6-40P-201ENST00000384254 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
RNU6-40P-201ENST00000384254 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
RNU6-40P-201ENST00000384254 CCNYL3P0C7X3 344 aa9.88□□□□□ -0.83
RNU6-40P-201ENST00000384254 ARMC2Q8NEN0 867 aa9.88□□□□□ -0.83
RNU6-40P-201ENST00000384254 F12P00748 615 aaPredicted RBP9.87□□□□□ -0.83
RNU6-40P-201ENST00000384254 NR1H3Q13133 447 aa9.87□□□□□ -0.83
RNU6-40P-201ENST00000384254 NUDT12Q9BQG2 462 aa9.87□□□□□ -0.83
RNU6-40P-201ENST00000384254 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
RNU6-40P-201ENST00000384254 ZBBXA8MT70 800 aa9.86□□□□□ -0.83
RNU6-40P-201ENST00000384254 DXOO77932 396 aaKnown RBP9.86□□□□□ -0.83
RNU6-40P-201ENST00000384254 ADAMTS19Q8TE59 1207 aa9.86□□□□□ -0.83
RNU6-40P-201ENST00000384254 ZNF592Q92610 1267 aa9.86□□□□□ -0.83
RNU6-40P-201ENST00000384254 ALG2Q9H553 416 aa9.86□□□□□ -0.83
RNU6-40P-201ENST00000384254 ZPR1O75312 459 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms