RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ZSCAN30Q86W11 494 aa14.88□□□□□ -0.03
SRGAP3-202ENST00000383836 CALCOCO1Q9P1Z2 691 aa14.88□□□□□ -0.03
SRGAP3-202ENST00000383836 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
SRGAP3-202ENST00000383836 G3V3G9 751 aa14.88□□□□□ -0.03
SRGAP3-202ENST00000383836 DCAF8Q5TAQ9 597 aa14.88□□□□□ -0.03
SRGAP3-202ENST00000383836 LNPKQ9C0E8 428 aa14.88□□□□□ -0.03
SRGAP3-202ENST00000383836 ST20-MTHFSA0A0A6YYL1 179 aa14.87□□□□□ -0.03
SRGAP3-202ENST00000383836 BACH2Q9BYV9 841 aa14.87□□□□□ -0.03
SRGAP3-202ENST00000383836 CCDC18Q5T9S5 1454 aa14.87□□□□□ -0.03
SRGAP3-202ENST00000383836 CWC22Q9HCG8 908 aaKnown RBP14.87□□□□□ -0.03
SRGAP3-202ENST00000383836 CUX2O14529 1486 aa14.86□□□□□ -0.03
SRGAP3-202ENST00000383836 RABEP1Q15276 862 aa14.86□□□□□ -0.03
SRGAP3-202ENST00000383836 PRDM10Q9NQV6 1147 aa14.86□□□□□ -0.03
SRGAP3-202ENST00000383836 NINLQ9Y2I6 1382 aa14.86□□□□□ -0.03
SRGAP3-202ENST00000383836 SAFBQ15424 915 aaKnown RBP eCLIP14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 IFIT2P09913 472 aaKnown RBP14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 PDCP20941 246 aa14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 TRDNQ13061 729 aa14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 ZMYND15Q9H091 742 aa14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 EPS15P42566 896 aa14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 CT47A1Q5JQC4 288 aaPredicted RBP14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
SRGAP3-202ENST00000383836 APAF1O14727 1248 aa14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 HSP90AB2PQ58FF8 381 aa14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 ERLIN2O94905 339 aa14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 API5Q9BZZ5 524 aaKnown RBP14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 NEXNQ0ZGT2 675 aa14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 PSMA5P28066 241 aa14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 CBX1P83916 185 aa14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 CCDC27Q2M243 656 aa14.84□□□□□ -0.03
SRGAP3-202ENST00000383836 WIZO95785 1651 aa14.83□□□□□ -0.04
SRGAP3-202ENST00000383836 FILIP1LQ4L180 1135 aa14.83□□□□□ -0.04
SRGAP3-202ENST00000383836 AEBP1Q8IUX7 1158 aa14.83□□□□□ -0.04
SRGAP3-202ENST00000383836 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
SRGAP3-202ENST00000383836 ERC2O15083 957 aa14.83□□□□□ -0.04
SRGAP3-202ENST00000383836 ODF2Q5BJF6 829 aa14.83□□□□□ -0.04
SRGAP3-202ENST00000383836 ELL2O00472 640 aaPredicted RBP14.82□□□□□ -0.04
SRGAP3-202ENST00000383836 CCDC9Q9Y3X0 531 aaKnown RBP14.82□□□□□ -0.04
SRGAP3-202ENST00000383836 FBXO3Q9UK99 471 aa14.82□□□□□ -0.04
SRGAP3-202ENST00000383836 FOSBP53539 338 aa14.82□□□□□ -0.04
SRGAP3-202ENST00000383836 LRRCC1Q9C099 1032 aa14.82□□□□□ -0.04
SRGAP3-202ENST00000383836 IQCEQ6IPM2 695 aa14.82□□□□□ -0.04
SRGAP3-202ENST00000383836 CGNQ9P2M7 1197 aaKnown RBP14.82□□□□□ -0.04
SRGAP3-202ENST00000383836 OFD1O75665 1012 aa14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 CCDC144AA2RUR9 1427 aa14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 NFXL1Q6ZNB6 911 aa14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 CENPHQ9H3R5 247 aa14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 C9orf78Q9NZ63 289 aaPredicted RBP14.81□□□□□ -0.04
SRGAP3-202ENST00000383836 MCM4P33991 863 aa14.8□□□□□ -0.04
SRGAP3-202ENST00000383836 DDX11Q96FC9 970 aa14.8□□□□□ -0.04
SRGAP3-202ENST00000383836 AEBP2Q6ZN18 517 aaPredicted RBP14.8□□□□□ -0.04
SRGAP3-202ENST00000383836 ERICH2A1L162 156 aa14.8□□□□□ -0.04
SRGAP3-202ENST00000383836 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 FIBPO43427 364 aa14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 WWC1Q8IX03 1113 aa14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 TNMDQ9H2S6 317 aa14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 AKNAQ7Z591 1439 aa14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 K7ELQ4 463 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 SUPT6HQ7KZ85 1726 aaKnown RBP14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 CIZ1Q9ULV3 898 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 CCDC7Q96M83 1385 aa14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 CCDC102AQ96A19 550 aa14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 TCEAL9Q9UHQ7 104 aa14.79□□□□□ -0.04
SRGAP3-202ENST00000383836 RUNDC1Q96C34 613 aa14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 UACAQ9BZF9 1416 aa14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 SERPINC1P01008 464 aa14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 TMCO3Q6UWJ1 677 aa14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 ZNF396Q96N95 335 aaPredicted RBP14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 FMNL2Q96PY5 1086 aa14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 NEK4P51957 841 aa14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 FAM107BQ9H098 131 aa14.78□□□□□ -0.04
SRGAP3-202ENST00000383836 KIF2AO00139 706 aaPredicted RBP14.77□□□□□ -0.04
SRGAP3-202ENST00000383836 ZHX1Q9UKY1 873 aaPredicted RBP14.77□□□□□ -0.04
SRGAP3-202ENST00000383836 AMPHP49418 695 aa14.77□□□□□ -0.04
SRGAP3-202ENST00000383836 BRMS1Q9HCU9 246 aa14.77□□□□□ -0.04
SRGAP3-202ENST00000383836 WDR33Q9C0J8 1336 aaKnown RBP14.77□□□□□ -0.04
SRGAP3-202ENST00000383836 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
SRGAP3-202ENST00000383836 AMOTL1Q8IY63 956 aa14.77□□□□□ -0.05
SRGAP3-202ENST00000383836 ENOX2Q16206 610 aaKnown RBP14.77□□□□□ -0.05
SRGAP3-202ENST00000383836 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.05
SRGAP3-202ENST00000383836 ZNHIT6Q9NWK9 470 aaKnown RBP14.77□□□□□ -0.05
SRGAP3-202ENST00000383836 PIP4K2AP48426 406 aaPredicted RBP14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 CNTROBQ8N137 903 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 TXLNBQ8N3L3 684 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 SHTN1A0MZ66 631 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 GPATCH11Q8N954 259 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 MAGEC2Q9UBF1 373 aaPredicted RBP14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 UBXN4Q92575 508 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 CCDC181Q5TID7 509 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 CBFA2T2O43439 604 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 PPFIBP1Q86W92 1011 aa14.76□□□□□ -0.05
SRGAP3-202ENST00000383836 FAM193AP78312 1265 aa14.75□□□□□ -0.05
SRGAP3-202ENST00000383836 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
SRGAP3-202ENST00000383836 RALYLQ86SE5 291 aaKnown RBP14.75□□□□□ -0.05
SRGAP3-202ENST00000383836 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms