RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 GIMAP7Q8NHV1 300 aa11.79□□□□□ -0.52
VLDLR-203ENST00000382100 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
VLDLR-203ENST00000382100 ITPRIPQ8IWB1 547 aa11.79□□□□□ -0.52
VLDLR-203ENST00000382100 SEPT7Q16181 437 aaKnown RBP11.79□□□□□ -0.52
VLDLR-203ENST00000382100 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
VLDLR-203ENST00000382100 MYO15BQ96JP2 1530 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 CNGA1P29973 690 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 FMNL3Q8IVF7 1028 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 EHBP1Q8NDI1 1231 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
VLDLR-203ENST00000382100 IFT57Q9NWB7 429 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 IVLP07476 585 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
VLDLR-203ENST00000382100 MIA2Q96PC5 1412 aa11.78□□□□□ -0.52
VLDLR-203ENST00000382100 ZNF396Q96N95 335 aaPredicted RBP11.77□□□□□ -0.52
VLDLR-203ENST00000382100 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.52
VLDLR-203ENST00000382100 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.52
VLDLR-203ENST00000382100 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
VLDLR-203ENST00000382100 SEPT6Q14141 434 aa11.77□□□□□ -0.53
VLDLR-203ENST00000382100 CCDC192P0DO97 292 aa11.77□□□□□ -0.53
VLDLR-203ENST00000382100 SPECC1LQ69YQ0 1117 aa11.77□□□□□ -0.53
VLDLR-203ENST00000382100 TMCO5BA8MYB1 307 aa11.76□□□□□ -0.53
VLDLR-203ENST00000382100 HOXA7P31268 230 aaPredicted RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
VLDLR-203ENST00000382100 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
VLDLR-203ENST00000382100 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 JAKMIP3Q5VZ66 844 aa11.76□□□□□ -0.53
VLDLR-203ENST00000382100 AXDND1Q5T1B0 1012 aaPredicted RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 SMC1AQ14683 1233 aaKnown RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 DNAJC21Q5F1R6 531 aaKnown RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 SMC2O95347 1197 aa11.76□□□□□ -0.53
VLDLR-203ENST00000382100 PYM1Q9BRP8 204 aaKnown RBP11.76□□□□□ -0.53
VLDLR-203ENST00000382100 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
VLDLR-203ENST00000382100 ERICH2A1L162 156 aa11.75□□□□□ -0.53
VLDLR-203ENST00000382100 C6orf163Q5TEZ5 329 aa11.75□□□□□ -0.53
VLDLR-203ENST00000382100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.53
VLDLR-203ENST00000382100 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
VLDLR-203ENST00000382100 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
VLDLR-203ENST00000382100 SREK1Q8WXA9 508 aaKnown RBP11.75□□□□□ -0.53
VLDLR-203ENST00000382100 ZKSCAN2Q63HK3 967 aa11.75□□□□□ -0.53
VLDLR-203ENST00000382100 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
VLDLR-203ENST00000382100 TRIM6-TRIM34B2RNG4 842 aa11.75□□□□□ -0.53
VLDLR-203ENST00000382100 CDKL5O76039 1030 aa11.74□□□□□ -0.53
VLDLR-203ENST00000382100 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
VLDLR-203ENST00000382100 SYCP1Q15431 976 aa11.74□□□□□ -0.53
VLDLR-203ENST00000382100 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
VLDLR-203ENST00000382100 SH2D4BQ5SQS7 431 aa11.74□□□□□ -0.53
VLDLR-203ENST00000382100 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
VLDLR-203ENST00000382100 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
VLDLR-203ENST00000382100 SLC3A2P08195 630 aaKnown RBP11.73□□□□□ -0.53
VLDLR-203ENST00000382100 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
VLDLR-203ENST00000382100 DDX46Q7L014 1031 aaKnown RBP11.73□□□□□ -0.53
VLDLR-203ENST00000382100 ABCC9O60706 1549 aa11.73□□□□□ -0.53
VLDLR-203ENST00000382100 ZSCAN12O43309 604 aa11.73□□□□□ -0.53
VLDLR-203ENST00000382100 PPP1R12BO60237 982 aaPredicted RBP11.73□□□□□ -0.53
VLDLR-203ENST00000382100 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
VLDLR-203ENST00000382100 AIMP1Q12904 312 aaKnown RBP11.73□□□□□ -0.53
VLDLR-203ENST00000382100 STMN4Q9H169 189 aaPredicted RBP11.73□□□□□ -0.53
VLDLR-203ENST00000382100 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
VLDLR-203ENST00000382100 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
VLDLR-203ENST00000382100 CCDC175P0C221 793 aa11.72□□□□□ -0.53
VLDLR-203ENST00000382100 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
VLDLR-203ENST00000382100 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
VLDLR-203ENST00000382100 MYO10Q9HD67 2058 aa11.72□□□□□ -0.53
VLDLR-203ENST00000382100 GCOM1H8Y6P7 765 aaPredicted RBP11.72□□□□□ -0.53
VLDLR-203ENST00000382100 MYZAPP0CAP1 466 aa11.72□□□□□ -0.53
VLDLR-203ENST00000382100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.72□□□□□ -0.53
VLDLR-203ENST00000382100 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
VLDLR-203ENST00000382100 MAGEC2Q9UBF1 373 aaPredicted RBP11.71□□□□□ -0.53
VLDLR-203ENST00000382100 WDR66Q8TBY9 1149 aa11.71□□□□□ -0.53
VLDLR-203ENST00000382100 TTC14Q96N46 770 aa11.71□□□□□ -0.53
VLDLR-203ENST00000382100 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
VLDLR-203ENST00000382100 KIF3CO14782 793 aa11.71□□□□□ -0.54
VLDLR-203ENST00000382100 KIF20AO95235 890 aa11.71□□□□□ -0.54
VLDLR-203ENST00000382100 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.54
VLDLR-203ENST00000382100 CEP128Q6ZU80 1094 aa11.71□□□□□ -0.54
VLDLR-203ENST00000382100 TTC12Q9H892 705 aaPredicted RBP11.71□□□□□ -0.54
VLDLR-203ENST00000382100 BICD2Q8TD16 824 aa11.71□□□□□ -0.54
VLDLR-203ENST00000382100 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
VLDLR-203ENST00000382100 CCDC146Q8IYE0 955 aa11.7□□□□□ -0.54
VLDLR-203ENST00000382100 RALYLQ86SE5 291 aaKnown RBP11.7□□□□□ -0.54
VLDLR-203ENST00000382100 NAA15Q9BXJ9 866 aaKnown RBP11.7□□□□□ -0.54
VLDLR-203ENST00000382100 FGFR1OPO95684 399 aaKnown RBP11.7□□□□□ -0.54
VLDLR-203ENST00000382100 FAM193AP78312 1265 aa11.7□□□□□ -0.54
VLDLR-203ENST00000382100 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■■■■ 149.1
VLDLR-203ENST00000382100 FILIP1Q7Z7B0 1213 aa11.7□□□□□ -0.54
VLDLR-203ENST00000382100 KNL1Q8NG31 2342 aa11.69□□□□□ -0.54
VLDLR-203ENST00000382100 FERMT1Q9BQL6 677 aa11.69□□□□□ -0.54
VLDLR-203ENST00000382100 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
VLDLR-203ENST00000382100 PDCL3Q9H2J4 239 aa11.69□□□□□ -0.54
VLDLR-203ENST00000382100 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
VLDLR-203ENST00000382100 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
VLDLR-203ENST00000382100 GZF1Q9H116 711 aaPredicted RBP11.69□□□□□ -0.54
VLDLR-203ENST00000382100 PCMTD1Q96MG8 357 aaPredicted RBP11.69□□□□□ -0.54
VLDLR-203ENST00000382100 CEP83Q9Y592 693 aa11.69□□□□□ -0.54
VLDLR-203ENST00000382100 CCAR1Q8IX12 1150 aaKnown RBP11.69□□□□□ -0.54
VLDLR-203ENST00000382100 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms