RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
VLDLR-202ENST00000382099 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
VLDLR-202ENST00000382099 PKD2Q13563 968 aa18.62■□□□□ 0.57
VLDLR-202ENST00000382099 KIF3AQ9Y496 699 aa18.62■□□□□ 0.57
VLDLR-202ENST00000382099 RAB3GAP1Q15042 981 aa18.62■□□□□ 0.57
VLDLR-202ENST00000382099 PRIM1P49642 420 aaKnown RBP18.61■□□□□ 0.57
VLDLR-202ENST00000382099 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
VLDLR-202ENST00000382099 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
VLDLR-202ENST00000382099 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
VLDLR-202ENST00000382099 KLHL40Q2TBA0 621 aa18.6■□□□□ 0.57
VLDLR-202ENST00000382099 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
VLDLR-202ENST00000382099 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
VLDLR-202ENST00000382099 TRERF1Q96PN7 1200 aa18.6■□□□□ 0.57
VLDLR-202ENST00000382099 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
VLDLR-202ENST00000382099 ZBTB9Q96C00 473 aa18.59■□□□□ 0.57
VLDLR-202ENST00000382099 ZSCAN23Q3MJ62 389 aa18.59■□□□□ 0.57
VLDLR-202ENST00000382099 NBPF1Q3BBV0 1214 aa18.59■□□□□ 0.57
VLDLR-202ENST00000382099 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
VLDLR-202ENST00000382099 MCM5P33992 734 aa18.58■□□□□ 0.57
VLDLR-202ENST00000382099 TROQ12816 1431 aaPredicted RBP18.58■□□□□ 0.56
VLDLR-202ENST00000382099 HMGN5P82970 282 aaKnown RBP18.58■□□□□ 0.56
VLDLR-202ENST00000382099 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
VLDLR-202ENST00000382099 CIZ1Q9ULV3 898 aaPredicted RBP18.57■□□□□ 0.56
VLDLR-202ENST00000382099 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
VLDLR-202ENST00000382099 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
VLDLR-202ENST00000382099 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.56
VLDLR-202ENST00000382099 C17orf53Q8N3J3 647 aaPredicted RBP18.56■□□□□ 0.56
VLDLR-202ENST00000382099 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
VLDLR-202ENST00000382099 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
VLDLR-202ENST00000382099 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
VLDLR-202ENST00000382099 ITSN2Q9NZM3 1697 aa18.56■□□□□ 0.56
VLDLR-202ENST00000382099 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
VLDLR-202ENST00000382099 RALGAPBQ86X10 1494 aa18.55■□□□□ 0.56
VLDLR-202ENST00000382099 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
VLDLR-202ENST00000382099 BAG4O95429 457 aaKnown RBP18.55■□□□□ 0.56
VLDLR-202ENST00000382099 UHRF1BP1Q6BDS2 1440 aa18.54■□□□□ 0.56
VLDLR-202ENST00000382099 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
VLDLR-202ENST00000382099 ERICH4A6NGS2 130 aa18.54■□□□□ 0.56
VLDLR-202ENST00000382099 PDLIM2Q96JY6 352 aa18.54■□□□□ 0.56
VLDLR-202ENST00000382099 DNAJC2Q99543 621 aaKnown RBP18.54■□□□□ 0.56
VLDLR-202ENST00000382099 RWDD1Q9H446 243 aaPredicted RBP18.54■□□□□ 0.56
VLDLR-202ENST00000382099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.54■□□□□ 0.56
VLDLR-202ENST00000382099 TRIM6-TRIM34B2RNG4 842 aa18.53■□□□□ 0.56
VLDLR-202ENST00000382099 SMC5Q8IY18 1101 aa18.53■□□□□ 0.56
VLDLR-202ENST00000382099 PRIMPOLQ96LW4 560 aa18.53■□□□□ 0.56
VLDLR-202ENST00000382099 BCL2L13Q9BXK5 485 aa18.53■□□□□ 0.56
VLDLR-202ENST00000382099 TRIM34Q9BYJ4 488 aa18.53■□□□□ 0.56
VLDLR-202ENST00000382099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.53■□□□□ 0.56
VLDLR-202ENST00000382099 ANKRD50Q9ULJ7 1429 aa18.52■□□□□ 0.56
VLDLR-202ENST00000382099 APAF1O14727 1248 aa18.52■□□□□ 0.55
VLDLR-202ENST00000382099 ZNF445P59923 1031 aa18.52■□□□□ 0.55
VLDLR-202ENST00000382099 SYCE3A1L190 88 aa18.51■□□□□ 0.55
VLDLR-202ENST00000382099 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
VLDLR-202ENST00000382099 BLMP54132 1417 aaPredicted RBP18.51■□□□□ 0.55
VLDLR-202ENST00000382099 CCDC66A2RUB6 948 aa18.51■□□□□ 0.55
VLDLR-202ENST00000382099 TEX2Q8IWB9 1127 aa18.51■□□□□ 0.55
VLDLR-202ENST00000382099 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
VLDLR-202ENST00000382099 PDE3AQ14432 1141 aa18.51■□□□□ 0.55
VLDLR-202ENST00000382099 ZMYM4Q5VZL5 1548 aa18.5■□□□□ 0.55
VLDLR-202ENST00000382099 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
VLDLR-202ENST00000382099 ANKRD30AQ9BXX3 1397 aa18.5■□□□□ 0.55
VLDLR-202ENST00000382099 TIGD1Q96MW7 591 aa18.49■□□□□ 0.55
VLDLR-202ENST00000382099 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
VLDLR-202ENST00000382099 DDIT3P35638 169 aa18.49■□□□□ 0.55
VLDLR-202ENST00000382099 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
VLDLR-202ENST00000382099 NOLC1Q14978 699 aaKnown RBP eCLIP18.49■□□□□ 0.55
VLDLR-202ENST00000382099 CHMP4CQ96CF2 233 aa18.49■□□□□ 0.55
VLDLR-202ENST00000382099 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
VLDLR-202ENST00000382099 NUP155O75694 1391 aa18.48■□□□□ 0.55
VLDLR-202ENST00000382099 E9PCH4 1651 aa18.48■□□□□ 0.55
VLDLR-202ENST00000382099 CDC42BPAQ5VT25 1732 aa18.48■□□□□ 0.55
VLDLR-202ENST00000382099 PLCB2Q00722 1185 aa18.48■□□□□ 0.55
VLDLR-202ENST00000382099 TNNT3P45378 269 aaPredicted RBP18.47■□□□□ 0.55
VLDLR-202ENST00000382099 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
VLDLR-202ENST00000382099 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
VLDLR-202ENST00000382099 RBM25P49756 843 aaKnown RBP18.47■□□□□ 0.55
VLDLR-202ENST00000382099 FOXD4L5Q5VV16 416 aaPredicted RBP18.47■□□□□ 0.55
VLDLR-202ENST00000382099 FOXD4L4Q8WXT5 416 aaPredicted RBP18.47■□□□□ 0.55
VLDLR-202ENST00000382099 RGS22Q8NE09 1264 aa18.46■□□□□ 0.55
VLDLR-202ENST00000382099 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
VLDLR-202ENST00000382099 TTC12Q9H892 705 aaPredicted RBP18.46■□□□□ 0.55
VLDLR-202ENST00000382099 CD2BP2O95400 341 aaKnown RBP18.46■□□□□ 0.55
VLDLR-202ENST00000382099 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
VLDLR-202ENST00000382099 GAS2L2Q8NHY3 880 aa18.45■□□□□ 0.54
VLDLR-202ENST00000382099 K7ELQ4 463 aaPredicted RBP18.45■□□□□ 0.54
VLDLR-202ENST00000382099 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
VLDLR-202ENST00000382099 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
VLDLR-202ENST00000382099 PER1O15534 1290 aaPredicted RBP18.44■□□□□ 0.54
VLDLR-202ENST00000382099 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
VLDLR-202ENST00000382099 SNX21Q969T3 373 aa18.44■□□□□ 0.54
VLDLR-202ENST00000382099 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
VLDLR-202ENST00000382099 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
VLDLR-202ENST00000382099 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
VLDLR-202ENST00000382099 C9orf84Q5VXU9 1444 aa18.43■□□□□ 0.54
VLDLR-202ENST00000382099 BRD2P25440 801 aaKnown RBP18.42■□□□□ 0.54
VLDLR-202ENST00000382099 NKTRP30414 1462 aaKnown RBP18.42■□□□□ 0.54
VLDLR-202ENST00000382099 RLBP1P12271 317 aa18.42■□□□□ 0.54
VLDLR-202ENST00000382099 OGFRQ9NZT2 677 aa18.42■□□□□ 0.54
VLDLR-202ENST00000382099 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
VLDLR-202ENST00000382099 RIOK3O14730 519 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms