RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
SNPH-202ENST00000381873 GNAI1P63096 354 aa18.28■□□□□ 0.52
SNPH-202ENST00000381873 REC8O95072 547 aa18.28■□□□□ 0.52
SNPH-202ENST00000381873 RAPGEF6Q8TEU7 1601 aa18.28■□□□□ 0.52
SNPH-202ENST00000381873 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
SNPH-202ENST00000381873 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
SNPH-202ENST00000381873 CTTNBP2Q8WZ74 1663 aa18.28■□□□□ 0.52
SNPH-202ENST00000381873 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
SNPH-202ENST00000381873 PDE4AP27815 886 aa18.27■□□□□ 0.51
SNPH-202ENST00000381873 ABCC5O15440 1437 aa18.27■□□□□ 0.51
SNPH-202ENST00000381873 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.51
SNPH-202ENST00000381873 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
SNPH-202ENST00000381873 G3BP1Q13283 466 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNPH-202ENST00000381873 AMOTL1Q8IY63 956 aa18.26■□□□□ 0.51
SNPH-202ENST00000381873 NLRP2Q9NX02 1062 aa18.25■□□□□ 0.51
SNPH-202ENST00000381873 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
SNPH-202ENST00000381873 NLRP6P59044 892 aa18.25■□□□□ 0.51
SNPH-202ENST00000381873 TMEM132EQ6IEE7 984 aa18.24■□□□□ 0.51
SNPH-202ENST00000381873 KIF7Q2M1P5 1343 aa18.24■□□□□ 0.51
SNPH-202ENST00000381873 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
SNPH-202ENST00000381873 AMER1Q5JTC6 1135 aaPredicted RBP18.24■□□□□ 0.51
SNPH-202ENST00000381873 HMOX1P09601 288 aa18.23■□□□□ 0.51
SNPH-202ENST00000381873 AEBP2Q6ZN18 517 aaPredicted RBP18.23■□□□□ 0.51
SNPH-202ENST00000381873 DDX11L8A8MPP1 907 aa18.23■□□□□ 0.51
SNPH-202ENST00000381873 APPP05067 770 aa18.23■□□□□ 0.51
SNPH-202ENST00000381873 CEP89Q96ST8 783 aa18.23■□□□□ 0.51
SNPH-202ENST00000381873 TPM3P06753 285 aa18.22■□□□□ 0.51
SNPH-202ENST00000381873 HSP90AB4PQ58FF6 505 aa18.22■□□□□ 0.51
SNPH-202ENST00000381873 MEX3CQ5U5Q3 659 aaKnown RBP18.22■□□□□ 0.51
SNPH-202ENST00000381873 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
SNPH-202ENST00000381873 CABP2Q9NPB3 220 aa18.21■□□□□ 0.51
SNPH-202ENST00000381873 TRDNQ13061 729 aa18.21■□□□□ 0.51
SNPH-202ENST00000381873 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
SNPH-202ENST00000381873 TRIM34Q9BYJ4 488 aa18.2■□□□□ 0.5
SNPH-202ENST00000381873 PES1O00541 588 aaKnown RBP18.2■□□□□ 0.5
SNPH-202ENST00000381873 CPLX1O14810 134 aa18.2■□□□□ 0.5
SNPH-202ENST00000381873 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
SNPH-202ENST00000381873 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
SNPH-202ENST00000381873 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
SNPH-202ENST00000381873 TPD52L1Q16890 204 aaPredicted RBP18.2■□□□□ 0.5
SNPH-202ENST00000381873 NCOA1Q15788 1441 aa18.19■□□□□ 0.5
SNPH-202ENST00000381873 RAPGEF3O95398 923 aa18.19■□□□□ 0.5
SNPH-202ENST00000381873 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
SNPH-202ENST00000381873 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
SNPH-202ENST00000381873 BECN2A8MW95 431 aa18.18■□□□□ 0.5
SNPH-202ENST00000381873 TRIM29Q14134 588 aa18.18■□□□□ 0.5
SNPH-202ENST00000381873 FOXD4L6Q3SYB3 417 aaPredicted RBP18.18■□□□□ 0.5
SNPH-202ENST00000381873 FOXD4L3Q6VB84 417 aaPredicted RBP18.18■□□□□ 0.5
SNPH-202ENST00000381873 CFAP70Q5T0N1 1121 aa18.18■□□□□ 0.5
SNPH-202ENST00000381873 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
SNPH-202ENST00000381873 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
SNPH-202ENST00000381873 KIAA0556O60303 1618 aa18.18■□□□□ 0.5
SNPH-202ENST00000381873 FANCAO15360 1455 aa18.17■□□□□ 0.5
SNPH-202ENST00000381873 RAD21O60216 631 aa18.17■□□□□ 0.5
SNPH-202ENST00000381873 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
SNPH-202ENST00000381873 BRD4O60885 1362 aaPredicted RBP18.17■□□□□ 0.5
SNPH-202ENST00000381873 GOLGA6L19H0YKK7 550 aa18.17■□□□□ 0.5
SNPH-202ENST00000381873 TSR1Q2NL82 804 aaKnown RBP18.17■□□□□ 0.5
SNPH-202ENST00000381873 ERBINQ96RT1 1412 aa18.16■□□□□ 0.5
SNPH-202ENST00000381873 MTHFSP49914 203 aa18.16■□□□□ 0.5
SNPH-202ENST00000381873 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
SNPH-202ENST00000381873 CTDP1Q9Y5B0 961 aaPredicted RBP18.15■□□□□ 0.5
SNPH-202ENST00000381873 GPATCH8Q9UKJ3 1502 aaKnown RBP18.15■□□□□ 0.5
SNPH-202ENST00000381873 PDE4CQ08493 712 aa18.15■□□□□ 0.5
SNPH-202ENST00000381873 SKOR2Q2VWA4 1001 aaPredicted RBP18.15■□□□□ 0.5
SNPH-202ENST00000381873 ERC2O15083 957 aa18.15■□□□□ 0.5
SNPH-202ENST00000381873 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
SNPH-202ENST00000381873 PLCH2O75038 1416 aa18.14■□□□□ 0.5
SNPH-202ENST00000381873 NUP160Q12769 1436 aa18.14■□□□□ 0.5
SNPH-202ENST00000381873 DHX16O60231 1041 aaKnown RBP18.14■□□□□ 0.5
SNPH-202ENST00000381873 AIMP1Q12904 312 aaKnown RBP18.14■□□□□ 0.5
SNPH-202ENST00000381873 TEX14Q8IWB6 1497 aa18.14■□□□□ 0.5
SNPH-202ENST00000381873 ATP10BO94823 1461 aa18.14■□□□□ 0.49
SNPH-202ENST00000381873 SLC4A3P48751 1232 aa18.14■□□□□ 0.49
SNPH-202ENST00000381873 USP35Q9P2H5 1018 aa18.14■□□□□ 0.49
SNPH-202ENST00000381873 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
SNPH-202ENST00000381873 AAMPQ13685 434 aa18.13■□□□□ 0.49
SNPH-202ENST00000381873 PROSER2Q86WR7 435 aaPredicted RBP18.13■□□□□ 0.49
SNPH-202ENST00000381873 LNPKQ9C0E8 428 aa18.13■□□□□ 0.49
SNPH-202ENST00000381873 NUP153P49790 1475 aaKnown RBP18.12■□□□□ 0.49
SNPH-202ENST00000381873 RBM33Q96EV2 1170 aaKnown RBP18.12■□□□□ 0.49
SNPH-202ENST00000381873 NEUROD6Q96NK8 337 aa18.12■□□□□ 0.49
SNPH-202ENST00000381873 TCEAL9Q9UHQ7 104 aa18.12■□□□□ 0.49
SNPH-202ENST00000381873 UBTFL1P0CB47 393 aaPredicted RBP18.12■□□□□ 0.49
SNPH-202ENST00000381873 TPM1P09493 284 aa18.11■□□□□ 0.49
SNPH-202ENST00000381873 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
SNPH-202ENST00000381873 GAS2L2Q8NHY3 880 aa18.11■□□□□ 0.49
SNPH-202ENST00000381873 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
SNPH-202ENST00000381873 DHX29Q7Z478 1369 aaKnown RBP18.11■□□□□ 0.49
SNPH-202ENST00000381873 A0A0U1RQG5 324 aaPredicted RBP18.11■□□□□ 0.49
SNPH-202ENST00000381873 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
SNPH-202ENST00000381873 ESCO1Q5FWF5 840 aa18.1■□□□□ 0.49
SNPH-202ENST00000381873 FBXW7Q969H0 707 aa18.1■□□□□ 0.49
SNPH-202ENST00000381873 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
SNPH-202ENST00000381873 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
SNPH-202ENST00000381873 ERICH2A1L162 156 aa18.1■□□□□ 0.49
SNPH-202ENST00000381873 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
SNPH-202ENST00000381873 TPM2P07951 284 aa18.1■□□□□ 0.49
SNPH-202ENST00000381873 CCDC47Q96A33 483 aaKnown RBP18.1■□□□□ 0.49
SNPH-202ENST00000381873 NFXL1Q6ZNB6 911 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms