RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 KIF3AQ9Y496 699 aa13.93□□□□□ -0.18
THUMPD1-201ENST00000381337 MCM2P49736 904 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 ERBINQ96RT1 1412 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 H3BQV1 296 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 CT47B1P0C2W7 299 aaPredicted RBP13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 C1orf115Q9H7X2 142 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 HDAC5Q9UQL6 1122 aa13.92□□□□□ -0.18
THUMPD1-201ENST00000381337 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
THUMPD1-201ENST00000381337 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
THUMPD1-201ENST00000381337 TEX35Q5T0J7 233 aa13.91□□□□□ -0.18
THUMPD1-201ENST00000381337 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
THUMPD1-201ENST00000381337 DAPK1P53355 1430 aa13.91□□□□□ -0.18
THUMPD1-201ENST00000381337 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
THUMPD1-201ENST00000381337 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 LETM1O95202 739 aaPredicted RBP13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 FAM184AQ8NB25 1140 aa13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 RRAGDQ9NQL2 400 aaPredicted RBP13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 RUFY2Q8WXA3 655 aa13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 GGNBP2Q9H3C7 697 aa13.9□□□□□ -0.18
THUMPD1-201ENST00000381337 CCAR2Q8N163 923 aaKnown RBP13.89□□□□□ -0.19
THUMPD1-201ENST00000381337 RNF123Q5XPI4 1314 aa13.89□□□□□ -0.19
THUMPD1-201ENST00000381337 HOMER1Q86YM7 354 aa13.89□□□□□ -0.19
THUMPD1-201ENST00000381337 NKTRP30414 1462 aaKnown RBP13.89□□□□□ -0.19
THUMPD1-201ENST00000381337 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
THUMPD1-201ENST00000381337 PRDM10Q9NQV6 1147 aa13.88□□□□□ -0.19
THUMPD1-201ENST00000381337 PCF11O94913 1555 aaKnown RBP13.88□□□□□ -0.19
THUMPD1-201ENST00000381337 SSFA2P28290 1259 aa13.88□□□□□ -0.19
THUMPD1-201ENST00000381337 GPS2Q13227 327 aa13.88□□□□□ -0.19
THUMPD1-201ENST00000381337 SYCE3A1L190 88 aa13.88□□□□□ -0.19
THUMPD1-201ENST00000381337 TRIM5Q9C035 493 aa13.88□□□□□ -0.19
THUMPD1-201ENST00000381337 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
THUMPD1-201ENST00000381337 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
THUMPD1-201ENST00000381337 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
THUMPD1-201ENST00000381337 SPC24Q8NBT2 197 aa13.87□□□□□ -0.19
THUMPD1-201ENST00000381337 SLC12A5Q9H2X9 1139 aa13.87□□□□□ -0.19
THUMPD1-201ENST00000381337 FIBPO43427 364 aa13.87□□□□□ -0.19
THUMPD1-201ENST00000381337 HMOX1P09601 288 aa13.86□□□□□ -0.19
THUMPD1-201ENST00000381337 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
THUMPD1-201ENST00000381337 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
THUMPD1-201ENST00000381337 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
THUMPD1-201ENST00000381337 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
THUMPD1-201ENST00000381337 LMOD2Q6P5Q4 547 aa13.85□□□□□ -0.19
THUMPD1-201ENST00000381337 TMEM57Q8N5G2 664 aa13.85□□□□□ -0.19
THUMPD1-201ENST00000381337 SUPT6HQ7KZ85 1726 aaKnown RBP13.85□□□□□ -0.19
THUMPD1-201ENST00000381337 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.195e-10■■■■□ 23.4
THUMPD1-201ENST00000381337 ARGLU1Q9NWB6 273 aaPredicted RBP13.85□□□□□ -0.19
THUMPD1-201ENST00000381337 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
THUMPD1-201ENST00000381337 PDCL2Q8N4E4 241 aa13.85□□□□□ -0.19
THUMPD1-201ENST00000381337 ERC2O15083 957 aa13.84□□□□□ -0.19
THUMPD1-201ENST00000381337 SCAPERQ9BY12 1400 aa13.84□□□□□ -0.19
THUMPD1-201ENST00000381337 PTPRKQ15262 1439 aa13.84□□□□□ -0.19
THUMPD1-201ENST00000381337 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
THUMPD1-201ENST00000381337 CCDC34Q96HJ3 373 aa13.84□□□□□ -0.19
THUMPD1-201ENST00000381337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.19
THUMPD1-201ENST00000381337 CBX1P83916 185 aa13.83□□□□□ -0.19
THUMPD1-201ENST00000381337 MNS1Q8NEH6 495 aa13.83□□□□□ -0.19
THUMPD1-201ENST00000381337 WDR33Q9C0J8 1336 aaKnown RBP13.83□□□□□ -0.19
THUMPD1-201ENST00000381337 COG3Q96JB2 828 aa13.83□□□□□ -0.2
THUMPD1-201ENST00000381337 KLHL40Q2TBA0 621 aa13.83□□□□□ -0.2
THUMPD1-201ENST00000381337 CCDC112Q8NEF3 446 aa13.83□□□□□ -0.2
THUMPD1-201ENST00000381337 BAG4O95429 457 aaKnown RBP13.82□□□□□ -0.2
THUMPD1-201ENST00000381337 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
THUMPD1-201ENST00000381337 C9orf84Q5VXU9 1444 aa13.82□□□□□ -0.2
THUMPD1-201ENST00000381337 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
THUMPD1-201ENST00000381337 DYNC1I1O14576 645 aa13.82□□□□□ -0.2
THUMPD1-201ENST00000381337 MCM5P33992 734 aa13.82□□□□□ -0.2
THUMPD1-201ENST00000381337 TWISTNBQ3B726 338 aaPredicted RBP13.82□□□□□ -0.2
THUMPD1-201ENST00000381337 SEC24BO95487 1268 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 PCDHB15Q9Y5E8 787 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 PTPRGP23470 1445 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 CCDC192P0DO97 292 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 CCDC73Q6ZRK6 1079 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 SSH1Q8WYL5 1049 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
THUMPD1-201ENST00000381337 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
THUMPD1-201ENST00000381337 NPHP1O15259 732 aa13.8□□□□□ -0.2
THUMPD1-201ENST00000381337 AMPHP49418 695 aa13.8□□□□□ -0.2
THUMPD1-201ENST00000381337 CHMP4CQ96CF2 233 aa13.79□□□□□ -0.2
THUMPD1-201ENST00000381337 ABCC5O15440 1437 aa13.79□□□□□ -0.2
THUMPD1-201ENST00000381337 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
THUMPD1-201ENST00000381337 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
THUMPD1-201ENST00000381337 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
THUMPD1-201ENST00000381337 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
THUMPD1-201ENST00000381337 DHX29Q7Z478 1369 aaKnown RBP13.78□□□□□ -0.2
THUMPD1-201ENST00000381337 A0A0G2JS52 829 aa13.78□□□□□ -0.2
THUMPD1-201ENST00000381337 TROQ12816 1431 aaPredicted RBP13.78□□□□□ -0.2
THUMPD1-201ENST00000381337 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
THUMPD1-201ENST00000381337 PDCP20941 246 aa13.77□□□□□ -0.2
THUMPD1-201ENST00000381337 OFD1O75665 1012 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms