RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 PER1O15534 1290 aaPredicted RBP10.94□□□□□ -0.66
ERCC8-202ENST00000381118 CC2D1BQ5T0F9 858 aaKnown RBP10.94□□□□□ -0.66
ERCC8-202ENST00000381118 CPS1P31327 1500 aa10.94□□□□□ -0.66
ERCC8-202ENST00000381118 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
ERCC8-202ENST00000381118 SLC12A5Q9H2X9 1139 aa10.94□□□□□ -0.66
ERCC8-202ENST00000381118 DIP2AQ14689 1571 aa10.93□□□□□ -0.66
ERCC8-202ENST00000381118 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
ERCC8-202ENST00000381118 ROBO2Q9HCK4 1378 aa10.93□□□□□ -0.66
ERCC8-202ENST00000381118 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
ERCC8-202ENST00000381118 KNSTRNQ9Y448 316 aa10.93□□□□□ -0.66
ERCC8-202ENST00000381118 TBX22Q9Y458 520 aa10.93□□□□□ -0.66
ERCC8-202ENST00000381118 TECPR2O15040 1411 aa10.93□□□□□ -0.66
ERCC8-202ENST00000381118 CDK19Q9BWU1 502 aa10.92□□□□□ -0.66
ERCC8-202ENST00000381118 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
ERCC8-202ENST00000381118 NCKAP5LQ9HCH0 1330 aa10.91□□□□□ -0.66
ERCC8-202ENST00000381118 FAM135BQ49AJ0 1406 aa10.91□□□□□ -0.66
ERCC8-202ENST00000381118 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.91□□□□□ -0.66
ERCC8-202ENST00000381118 MRS2Q9HD23 443 aa10.9□□□□□ -0.66
ERCC8-202ENST00000381118 CHD2O14647 1828 aaKnown RBP10.9□□□□□ -0.66
ERCC8-202ENST00000381118 CARD14Q9BXL6 1004 aa10.9□□□□□ -0.66
ERCC8-202ENST00000381118 NPHP4O75161 1426 aaPredicted RBP10.9□□□□□ -0.67
ERCC8-202ENST00000381118 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
ERCC8-202ENST00000381118 HSPA2P54652 639 aa10.89□□□□□ -0.67
ERCC8-202ENST00000381118 KCNA6P17658 529 aa10.89□□□□□ -0.67
ERCC8-202ENST00000381118 ATAD2Q6PL18 1390 aa10.89□□□□□ -0.67
ERCC8-202ENST00000381118 PARD3Q8TEW0 1356 aa10.88□□□□□ -0.67
ERCC8-202ENST00000381118 WASLO00401 505 aaPredicted RBP10.88□□□□□ -0.67
ERCC8-202ENST00000381118 RALBP1Q15311 655 aa10.88□□□□□ -0.67
ERCC8-202ENST00000381118 SIRT1Q96EB6 747 aa10.88□□□□□ -0.67
ERCC8-202ENST00000381118 NSD3Q9BZ95 1437 aa10.88□□□□□ -0.67
ERCC8-202ENST00000381118 NUTM2FA1L443 756 aa10.88□□□□□ -0.67
ERCC8-202ENST00000381118 AMER1Q5JTC6 1135 aaPredicted RBP10.88□□□□□ -0.67
ERCC8-202ENST00000381118 PUS7Q96PZ0 661 aaKnown RBP10.88□□□□□ -0.67
ERCC8-202ENST00000381118 MYBBP1AQ9BQG0 1328 aaKnown RBP10.87□□□□□ -0.67
ERCC8-202ENST00000381118 FAM9BQ8IZU0 186 aa10.87□□□□□ -0.67
ERCC8-202ENST00000381118 PTCH1Q13635 1447 aa10.87□□□□□ -0.67
ERCC8-202ENST00000381118 A0A1W2PP64 1363 aa10.87□□□□□ -0.67
ERCC8-202ENST00000381118 ANKRD36BQ8N2N9 1353 aa10.87□□□□□ -0.67
ERCC8-202ENST00000381118 RBM33Q96EV2 1170 aaKnown RBP10.86□□□□□ -0.67
ERCC8-202ENST00000381118 CABP1Q9NZU7 370 aa10.86□□□□□ -0.67
ERCC8-202ENST00000381118 PIK3R4Q99570 1358 aa10.86□□□□□ -0.67
ERCC8-202ENST00000381118 RGPD8O14715 1765 aaPredicted RBP10.85□□□□□ -0.67
ERCC8-202ENST00000381118 CENPBP07199 599 aaPredicted RBP10.85□□□□□ -0.67
ERCC8-202ENST00000381118 ADGRB2O60241 1585 aa10.85□□□□□ -0.67
ERCC8-202ENST00000381118 NINLQ9Y2I6 1382 aa10.85□□□□□ -0.67
ERCC8-202ENST00000381118 PPIP5K1Q6PFW1 1433 aa10.84□□□□□ -0.67
ERCC8-202ENST00000381118 LMTK3Q96Q04 1460 aa10.84□□□□□ -0.67
ERCC8-202ENST00000381118 NUDT16Q96DE0 195 aaKnown RBP10.84□□□□□ -0.67
ERCC8-202ENST00000381118 CD163L1Q9NR16 1453 aa10.84□□□□□ -0.67
ERCC8-202ENST00000381118 TERF2IPQ9NYB0 399 aa10.84□□□□□ -0.67
ERCC8-202ENST00000381118 ATP7BP35670 1465 aa10.83□□□□□ -0.68
ERCC8-202ENST00000381118 HDGFL2Q7Z4V5 671 aaPredicted RBP10.83□□□□□ -0.68
ERCC8-202ENST00000381118 NLRP13Q86W25 1043 aa10.83□□□□□ -0.68
ERCC8-202ENST00000381118 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
ERCC8-202ENST00000381118 PRR36Q9H6K5 1346 aa10.83□□□□□ -0.68
ERCC8-202ENST00000381118 ITSN1Q15811 1721 aa10.83□□□□□ -0.68
ERCC8-202ENST00000381118 TNNT2P45379 298 aaPredicted RBP10.82□□□□□ -0.68
ERCC8-202ENST00000381118 USP32Q8NFA0 1604 aa10.82□□□□□ -0.68
ERCC8-202ENST00000381118 CCDC61Q9Y6R9 512 aa10.82□□□□□ -0.68
ERCC8-202ENST00000381118 CGNL1Q0VF96 1302 aa10.82□□□□□ -0.68
ERCC8-202ENST00000381118 BRD4O60885 1362 aaPredicted RBP10.81□□□□□ -0.68
ERCC8-202ENST00000381118 PPP2R1AP30153 589 aa10.81□□□□□ -0.68
ERCC8-202ENST00000381118 NPC1L1Q9UHC9 1359 aa10.81□□□□□ -0.68
ERCC8-202ENST00000381118 KIF20BQ96Q89 1820 aa10.81□□□□□ -0.68
ERCC8-202ENST00000381118 STRCQ7RTU9 1775 aa10.81□□□□□ -0.68
ERCC8-202ENST00000381118 TOPAZ1Q8N9V7 1692 aa10.81□□□□□ -0.68
ERCC8-202ENST00000381118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.68
ERCC8-202ENST00000381118 HNRNPUQ00839 825 aaKnown RBP eCLIP10.8□□□□□ -0.68
ERCC8-202ENST00000381118 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
ERCC8-202ENST00000381118 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
ERCC8-202ENST00000381118 AKAP12Q02952 1782 aa10.8□□□□□ -0.68
ERCC8-202ENST00000381118 GGNBP2Q9H3C7 697 aa10.8□□□□□ -0.68
ERCC8-202ENST00000381118 CDC42BPGQ6DT37 1551 aa10.79□□□□□ -0.68
ERCC8-202ENST00000381118 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
ERCC8-202ENST00000381118 SENP3-EIF4A1A0A087X0R7 540 aa10.79□□□□□ -0.68
ERCC8-202ENST00000381118 NWD1Q149M9 1564 aa10.79□□□□□ -0.68
ERCC8-202ENST00000381118 MON2Q7Z3U7 1717 aa10.79□□□□□ -0.68
ERCC8-202ENST00000381118 FMN2Q9NZ56 1722 aa10.79□□□□□ -0.68
ERCC8-202ENST00000381118 PMFBP1Q8TBY8 1022 aa10.78□□□□□ -0.68
ERCC8-202ENST00000381118 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
ERCC8-202ENST00000381118 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
ERCC8-202ENST00000381118 NKTRP30414 1462 aaKnown RBP10.78□□□□□ -0.68
ERCC8-202ENST00000381118 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.68
ERCC8-202ENST00000381118 CPSF1Q10570 1443 aaKnown RBP10.77□□□□□ -0.69
ERCC8-202ENST00000381118 ACEP12821 1306 aa10.77□□□□□ -0.69
ERCC8-202ENST00000381118 FYB1O15117 783 aa10.77□□□□□ -0.69
ERCC8-202ENST00000381118 NSD2O96028 1365 aa10.76□□□□□ -0.69
ERCC8-202ENST00000381118 ADGRL3Q9HAR2 1447 aa10.76□□□□□ -0.69
ERCC8-202ENST00000381118 EDC4Q6P2E9 1401 aaKnown RBP10.75□□□□□ -0.69
ERCC8-202ENST00000381118 NME9Q86XW9 330 aa10.74□□□□□ -0.69
ERCC8-202ENST00000381118 NGDNQ8NEJ9 315 aaKnown RBP10.74□□□□□ -0.69
ERCC8-202ENST00000381118 NRKQ7Z2Y5 1582 aa10.74□□□□□ -0.69
ERCC8-202ENST00000381118 PLEKHG3A1L390 1219 aa10.74□□□□□ -0.69
ERCC8-202ENST00000381118 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
ERCC8-202ENST00000381118 MAP2P11137 1827 aaKnown RBP10.73□□□□□ -0.69
ERCC8-202ENST00000381118 ZRANB1Q9UGI0 708 aa10.73□□□□□ -0.69
ERCC8-202ENST00000381118 FBLN1P23142 703 aa10.73□□□□□ -0.69
ERCC8-202ENST00000381118 MTHFSP49914 203 aa10.73□□□□□ -0.69
ERCC8-202ENST00000381118 ANKARQ7Z5J8 1434 aa10.73□□□□□ -0.69
ERCC8-202ENST00000381118 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms