RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
HMGN1-202ENST00000380747 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
HMGN1-202ENST00000380747 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
HMGN1-202ENST00000380747 SETBP1Q9Y6X0 1596 aa13.48□□□□□ -0.25
HMGN1-202ENST00000380747 NRXN3Q9Y4C0 1643 aa13.46□□□□□ -0.25
HMGN1-202ENST00000380747 ADGRF5Q8IZF2 1346 aa13.46□□□□□ -0.25
HMGN1-202ENST00000380747 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
HMGN1-202ENST00000380747 DCCP43146 1447 aa13.46□□□□□ -0.26
HMGN1-202ENST00000380747 PPLO60437 1756 aa13.45□□□□□ -0.26
HMGN1-202ENST00000380747 ATF3P18847 181 aa13.45□□□□□ -0.26
HMGN1-202ENST00000380747 AMOTL2Q9Y2J4 779 aa13.45□□□□□ -0.26
HMGN1-202ENST00000380747 METP08581 1390 aa13.45□□□□□ -0.26
HMGN1-202ENST00000380747 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-202ENST00000380747 PROM2Q8N271 834 aa13.44□□□□□ -0.26
HMGN1-202ENST00000380747 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
HMGN1-202ENST00000380747 PTPRUQ92729 1446 aa13.44□□□□□ -0.26
HMGN1-202ENST00000380747 RXRBP28702 533 aa13.43□□□□□ -0.26
HMGN1-202ENST00000380747 C14orf37Q86TY3 774 aa13.43□□□□□ -0.26
HMGN1-202ENST00000380747 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
HMGN1-202ENST00000380747 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
HMGN1-202ENST00000380747 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
HMGN1-202ENST00000380747 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-202ENST00000380747 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
HMGN1-202ENST00000380747 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
HMGN1-202ENST00000380747 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
HMGN1-202ENST00000380747 MYOM2P54296 1465 aa13.4□□□□□ -0.26
HMGN1-202ENST00000380747 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
HMGN1-202ENST00000380747 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
HMGN1-202ENST00000380747 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
HMGN1-202ENST00000380747 STK26Q9P289 416 aa13.38□□□□□ -0.27
HMGN1-202ENST00000380747 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
HMGN1-202ENST00000380747 AFF2P51816 1311 aa13.38□□□□□ -0.27
HMGN1-202ENST00000380747 XRN1Q8IZH2 1706 aaKnown RBP13.37□□□□□ -0.27
HMGN1-202ENST00000380747 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
HMGN1-202ENST00000380747 CFAP70Q5T0N1 1121 aa13.37□□□□□ -0.27
HMGN1-202ENST00000380747 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
HMGN1-202ENST00000380747 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
HMGN1-202ENST00000380747 MST1RQ04912 1400 aa13.37□□□□□ -0.27
HMGN1-202ENST00000380747 NRXN1Q9ULB1 1477 aa13.36□□□□□ -0.27
HMGN1-202ENST00000380747 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
HMGN1-202ENST00000380747 C14orf93Q9H972 538 aaKnown RBP13.36□□□□□ -0.27
HMGN1-202ENST00000380747 EP400Q96L91 3159 aa13.35□□□□□ -0.27
HMGN1-202ENST00000380747 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
HMGN1-202ENST00000380747 STAC3Q96MF2 364 aa13.35□□□□□ -0.27
HMGN1-202ENST00000380747 ROBO2Q9HCK4 1378 aa13.34□□□□□ -0.27
HMGN1-202ENST00000380747 RGS12O14924 1447 aa13.34□□□□□ -0.27
HMGN1-202ENST00000380747 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-202ENST00000380747 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-202ENST00000380747 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-202ENST00000380747 LRPPRCP42704 1394 aaKnown RBP13.33□□□□□ -0.27
HMGN1-202ENST00000380747 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.27
HMGN1-202ENST00000380747 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.28
HMGN1-202ENST00000380747 PTCH1Q13635 1447 aa13.32□□□□□ -0.28
HMGN1-202ENST00000380747 QTRT2Q9H974 415 aaKnown RBP13.32□□□□□ -0.28
HMGN1-202ENST00000380747 LAMC1P11047 1609 aa13.31□□□□□ -0.28
HMGN1-202ENST00000380747 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
HMGN1-202ENST00000380747 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
HMGN1-202ENST00000380747 WAPLQ7Z5K2 1190 aa13.3□□□□□ -0.28
HMGN1-202ENST00000380747 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
HMGN1-202ENST00000380747 NGLY1Q96IV0 654 aa13.3□□□□□ -0.28
HMGN1-202ENST00000380747 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
HMGN1-202ENST00000380747 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-202ENST00000380747 ABCC11Q96J66 1382 aa13.3□□□□□ -0.28
HMGN1-202ENST00000380747 ATAD2Q6PL18 1390 aa13.29□□□□□ -0.28
HMGN1-202ENST00000380747 TECPR2O15040 1411 aa13.28□□□□□ -0.28
HMGN1-202ENST00000380747 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.29
HMGN1-202ENST00000380747 SPDYE6P0CI01 402 aa13.27□□□□□ -0.29
HMGN1-202ENST00000380747 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.29
HMGN1-202ENST00000380747 TRAK1Q9UPV9 953 aa13.27□□□□□ -0.29
HMGN1-202ENST00000380747 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
HMGN1-202ENST00000380747 C1orf167Q5SNV9 1468 aa13.27□□□□□ -0.29
HMGN1-202ENST00000380747 NALCNQ8IZF0 1738 aa13.27□□□□□ -0.29
HMGN1-202ENST00000380747 ADGRB1O14514 1584 aa13.26□□□□□ -0.29
HMGN1-202ENST00000380747 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-202ENST00000380747 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN1-202ENST00000380747 KNDC1Q76NI1 1749 aa13.26□□□□□ -0.29
HMGN1-202ENST00000380747 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
HMGN1-202ENST00000380747 POGKQ9P215 609 aa13.26□□□□□ -0.29
HMGN1-202ENST00000380747 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
HMGN1-202ENST00000380747 FNBP4Q8N3X1 1017 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-202ENST00000380747 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
HMGN1-202ENST00000380747 DDX17Q92841 729 aaKnown RBP13.24□□□□□ -0.29
HMGN1-202ENST00000380747 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-202ENST00000380747 NBPF1Q3BBV0 1214 aa13.23□□□□□ -0.29
HMGN1-202ENST00000380747 ATRNO75882 1429 aa13.22□□□□□ -0.29
HMGN1-202ENST00000380747 ADAMTS2O95450 1211 aa13.22□□□□□ -0.29
HMGN1-202ENST00000380747 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-202ENST00000380747 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
HMGN1-202ENST00000380747 USP21Q9UK80 565 aa13.22□□□□□ -0.29
HMGN1-202ENST00000380747 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
HMGN1-202ENST00000380747 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
HMGN1-202ENST00000380747 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-202ENST00000380747 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
HMGN1-202ENST00000380747 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.3
HMGN1-202ENST00000380747 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
HMGN1-202ENST00000380747 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
HMGN1-202ENST00000380747 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
HMGN1-202ENST00000380747 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-202ENST00000380747 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
HMGN1-202ENST00000380747 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms