RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TMEM132EQ6IEE7 984 aa19.43■□□□□ 0.7
COL2A1-202ENST00000380518 ERICH2A1L162 156 aa19.42■□□□□ 0.7
COL2A1-202ENST00000380518 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
COL2A1-202ENST00000380518 PCMTD1Q96MG8 357 aaPredicted RBP19.42■□□□□ 0.7
COL2A1-202ENST00000380518 GNAI3P08754 354 aa19.41■□□□□ 0.7
COL2A1-202ENST00000380518 HOMER1Q86YM7 354 aa19.41■□□□□ 0.7
COL2A1-202ENST00000380518 SAFBQ15424 915 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL2A1-202ENST00000380518 RALYLQ86SE5 291 aaKnown RBP19.41■□□□□ 0.7
COL2A1-202ENST00000380518 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
COL2A1-202ENST00000380518 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.41■□□□□ 0.7
COL2A1-202ENST00000380518 SYTL4Q96C24 671 aaPredicted RBP19.4■□□□□ 0.7
COL2A1-202ENST00000380518 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
COL2A1-202ENST00000380518 TRIM34Q9BYJ4 488 aa19.4■□□□□ 0.7
COL2A1-202ENST00000380518 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
COL2A1-202ENST00000380518 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.7
COL2A1-202ENST00000380518 DHX16O60231 1041 aaKnown RBP19.39■□□□□ 0.69
COL2A1-202ENST00000380518 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.69
COL2A1-202ENST00000380518 NEUROD6Q96NK8 337 aa19.39■□□□□ 0.69
COL2A1-202ENST00000380518 NLRP6P59044 892 aa19.38■□□□□ 0.69
COL2A1-202ENST00000380518 CLASRPQ8N2M8 674 aaKnown RBP19.38■□□□□ 0.69
COL2A1-202ENST00000380518 MRE11P49959 708 aa19.38■□□□□ 0.69
COL2A1-202ENST00000380518 PDE3AQ14432 1141 aa19.38■□□□□ 0.69
COL2A1-202ENST00000380518 NINLQ9Y2I6 1382 aa19.38■□□□□ 0.69
COL2A1-202ENST00000380518 RAD21O60216 631 aa19.38■□□□□ 0.69
COL2A1-202ENST00000380518 PRM3Q9NNZ6 103 aa19.37■□□□□ 0.69
COL2A1-202ENST00000380518 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.37■□□□□ 0.69
COL2A1-202ENST00000380518 AIMP1Q12904 312 aaKnown RBP19.37■□□□□ 0.69
COL2A1-202ENST00000380518 PSMA5P28066 241 aa19.37■□□□□ 0.69
COL2A1-202ENST00000380518 TCEAL9Q9UHQ7 104 aa19.37■□□□□ 0.69
COL2A1-202ENST00000380518 NLRP2Q9NX02 1062 aa19.36■□□□□ 0.69
COL2A1-202ENST00000380518 CNTROBQ8N137 903 aa19.36■□□□□ 0.69
COL2A1-202ENST00000380518 CCDC30Q5VVM6 783 aa19.36■□□□□ 0.69
COL2A1-202ENST00000380518 GAS2L2Q8NHY3 880 aa19.36■□□□□ 0.69
COL2A1-202ENST00000380518 FAM69CQ0P6D2 419 aa19.36■□□□□ 0.69
COL2A1-202ENST00000380518 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
COL2A1-202ENST00000380518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.35■□□□□ 0.69
COL2A1-202ENST00000380518 MSH5O43196 834 aa19.35■□□□□ 0.69
COL2A1-202ENST00000380518 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
COL2A1-202ENST00000380518 EXOSC9Q06265 439 aaKnown RBP19.35■□□□□ 0.69
COL2A1-202ENST00000380518 PRKAR2BP31323 418 aa19.35■□□□□ 0.69
COL2A1-202ENST00000380518 FAM13BQ9NYF5 915 aa19.34■□□□□ 0.69
COL2A1-202ENST00000380518 SURF6O75683 361 aaKnown RBP19.34■□□□□ 0.69
COL2A1-202ENST00000380518 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
COL2A1-202ENST00000380518 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.69
COL2A1-202ENST00000380518 MCM2P49736 904 aa19.33■□□□□ 0.69
COL2A1-202ENST00000380518 FSD1Q9BTV5 496 aa19.33■□□□□ 0.68
COL2A1-202ENST00000380518 SCAPERQ9BY12 1400 aa19.33■□□□□ 0.68
COL2A1-202ENST00000380518 NASPP49321 788 aaPredicted RBP19.33■□□□□ 0.68
COL2A1-202ENST00000380518 CTDP1Q9Y5B0 961 aaPredicted RBP19.33■□□□□ 0.68
COL2A1-202ENST00000380518 MBD3O95983 291 aa19.32■□□□□ 0.68
COL2A1-202ENST00000380518 SETQ01105 290 aaPredicted RBP19.32■□□□□ 0.68
COL2A1-202ENST00000380518 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
COL2A1-202ENST00000380518 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
COL2A1-202ENST00000380518 ATF3P18847 181 aa19.32■□□□□ 0.68
COL2A1-202ENST00000380518 FOSBP53539 338 aa19.32■□□□□ 0.68
COL2A1-202ENST00000380518 TWISTNBQ3B726 338 aaPredicted RBP19.32■□□□□ 0.68
COL2A1-202ENST00000380518 NAT10Q9H0A0 1025 aaKnown RBP19.32■□□□□ 0.68
COL2A1-202ENST00000380518 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL2A1-202ENST00000380518 SDF4Q9BRK5 362 aa19.31■□□□□ 0.68
COL2A1-202ENST00000380518 RABEP1Q15276 862 aa19.31■□□□□ 0.68
COL2A1-202ENST00000380518 VSIG10Q8N0Z9 540 aa19.31■□□□□ 0.68
COL2A1-202ENST00000380518 TRAK2O60296 914 aa19.31■□□□□ 0.68
COL2A1-202ENST00000380518 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
COL2A1-202ENST00000380518 ZNF771Q7L3S4 317 aaPredicted RBP19.31■□□□□ 0.68
COL2A1-202ENST00000380518 NEK4P51957 841 aa19.3■□□□□ 0.68
COL2A1-202ENST00000380518 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
COL2A1-202ENST00000380518 FBXW7Q969H0 707 aa19.3■□□□□ 0.68
COL2A1-202ENST00000380518 TEX35Q5T0J7 233 aa19.3■□□□□ 0.68
COL2A1-202ENST00000380518 PDCP20941 246 aa19.3■□□□□ 0.68
COL2A1-202ENST00000380518 CCDC39Q9UFE4 941 aa19.29■□□□□ 0.68
COL2A1-202ENST00000380518 MNS1Q8NEH6 495 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 ARAP1Q96P48 1450 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 ARHGAP5Q13017 1502 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 HIP1O00291 1037 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 XBP1P17861 261 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 ARGLU1Q9NWB6 273 aaPredicted RBP19.28■□□□□ 0.68
COL2A1-202ENST00000380518 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 BRMS1Q9HCU9 246 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
COL2A1-202ENST00000380518 OLFM4Q6UX06 510 aa19.27■□□□□ 0.68
COL2A1-202ENST00000380518 LETM1O95202 739 aaPredicted RBP19.27■□□□□ 0.68
COL2A1-202ENST00000380518 RBM33Q96EV2 1170 aaKnown RBP19.27■□□□□ 0.68
COL2A1-202ENST00000380518 CFTRP13569 1480 aa19.27■□□□□ 0.68
COL2A1-202ENST00000380518 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
COL2A1-202ENST00000380518 RNF214Q8ND24 703 aa19.27■□□□□ 0.68
COL2A1-202ENST00000380518 GNAI2P04899 355 aa19.27■□□□□ 0.67
COL2A1-202ENST00000380518 CT47B1P0C2W7 299 aaPredicted RBP19.27■□□□□ 0.67
COL2A1-202ENST00000380518 PLEKHO1Q53GL0 409 aaPredicted RBP19.27■□□□□ 0.67
COL2A1-202ENST00000380518 KIAA1107Q9UPP5 1409 aa19.27■□□□□ 0.67
COL2A1-202ENST00000380518 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
COL2A1-202ENST00000380518 GPRASP1Q5JY77 1395 aa19.26■□□□□ 0.67
COL2A1-202ENST00000380518 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
COL2A1-202ENST00000380518 ERC1Q8IUD2 1116 aa19.26■□□□□ 0.67
COL2A1-202ENST00000380518 ABTB2Q8N961 1025 aa19.26■□□□□ 0.67
COL2A1-202ENST00000380518 PRAM1Q96QH2 718 aa19.25■□□□□ 0.67
COL2A1-202ENST00000380518 SLC12A5Q9H2X9 1139 aa19.25■□□□□ 0.67
COL2A1-202ENST00000380518 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
COL2A1-202ENST00000380518 CAVIN1Q6NZI2 390 aaKnown RBP19.25■□□□□ 0.67
COL2A1-202ENST00000380518 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
COL2A1-202ENST00000380518 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms