RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
PMS2-202ENST00000380416 RPRD2Q5VT52 1461 aaKnown RBP13.25□□□□□ -0.29
PMS2-202ENST00000380416 IDI1Q13907 227 aa13.25□□□□□ -0.29
PMS2-202ENST00000380416 MST1RQ04912 1400 aa13.24□□□□□ -0.29
PMS2-202ENST00000380416 HRCP23327 699 aa13.24□□□□□ -0.29
PMS2-202ENST00000380416 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
PMS2-202ENST00000380416 FNBP4Q8N3X1 1017 aaPredicted RBP13.24□□□□□ -0.29
PMS2-202ENST00000380416 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
PMS2-202ENST00000380416 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
PMS2-202ENST00000380416 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
PMS2-202ENST00000380416 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
PMS2-202ENST00000380416 LAMC1P11047 1609 aa13.23□□□□□ -0.29
PMS2-202ENST00000380416 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
PMS2-202ENST00000380416 NOS1P29475 1434 aa13.22□□□□□ -0.29
PMS2-202ENST00000380416 PROM2Q8N271 834 aa13.21□□□□□ -0.29
PMS2-202ENST00000380416 BCANQ96GW7 911 aa13.21□□□□□ -0.29
PMS2-202ENST00000380416 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
PMS2-202ENST00000380416 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
PMS2-202ENST00000380416 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.2□□□□□ -0.3
PMS2-202ENST00000380416 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
PMS2-202ENST00000380416 E9PCH4 1651 aa13.2□□□□□ -0.3
PMS2-202ENST00000380416 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
PMS2-202ENST00000380416 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
PMS2-202ENST00000380416 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
PMS2-202ENST00000380416 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
PMS2-202ENST00000380416 TRPM2O94759 1503 aa13.19□□□□□ -0.3
PMS2-202ENST00000380416 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
PMS2-202ENST00000380416 NUP155O75694 1391 aa13.19□□□□□ -0.3
PMS2-202ENST00000380416 XRN1Q8IZH2 1706 aaKnown RBP13.17□□□□□ -0.3
PMS2-202ENST00000380416 GLI3P10071 1580 aa13.17□□□□□ -0.3
PMS2-202ENST00000380416 RIMS2Q9UQ26 1411 aa13.17□□□□□ -0.3
PMS2-202ENST00000380416 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
PMS2-202ENST00000380416 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
PMS2-202ENST00000380416 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
PMS2-202ENST00000380416 TMEM131LA2VDJ0 1609 aa13.15□□□□□ -0.3
PMS2-202ENST00000380416 NAIPQ13075 1403 aa13.14□□□□□ -0.31
PMS2-202ENST00000380416 PTPRUQ92729 1446 aa13.14□□□□□ -0.31
PMS2-202ENST00000380416 SF3B2Q13435 895 aaKnown RBP13.14□□□□□ -0.31
PMS2-202ENST00000380416 GJD4Q96KN9 370 aaPredicted RBP13.14□□□□□ -0.31
PMS2-202ENST00000380416 MYOM2P54296 1465 aa13.14□□□□□ -0.31
PMS2-202ENST00000380416 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
PMS2-202ENST00000380416 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
PMS2-202ENST00000380416 RALGAPBQ86X10 1494 aa13.12□□□□□ -0.31
PMS2-202ENST00000380416 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
PMS2-202ENST00000380416 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
PMS2-202ENST00000380416 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
PMS2-202ENST00000380416 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
PMS2-202ENST00000380416 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
PMS2-202ENST00000380416 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
PMS2-202ENST00000380416 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
PMS2-202ENST00000380416 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
PMS2-202ENST00000380416 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
PMS2-202ENST00000380416 HDGFP51858 240 aaKnown RBP13.09□□□□□ -0.31
PMS2-202ENST00000380416 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
PMS2-202ENST00000380416 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
PMS2-202ENST00000380416 BAG6P46379 1132 aa13.07□□□□□ -0.32
PMS2-202ENST00000380416 SLIT2O94813 1529 aa13.07□□□□□ -0.32
PMS2-202ENST00000380416 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
PMS2-202ENST00000380416 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
PMS2-202ENST00000380416 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
PMS2-202ENST00000380416 KIF1BO60333 1816 aa13.05□□□□□ -0.32
PMS2-202ENST00000380416 CLTCL1P53675 1640 aa13.04□□□□□ -0.32
PMS2-202ENST00000380416 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
PMS2-202ENST00000380416 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
PMS2-202ENST00000380416 DISP2A7MBM2 1401 aa13.03□□□□□ -0.32
PMS2-202ENST00000380416 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
PMS2-202ENST00000380416 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.33
PMS2-202ENST00000380416 ZNF784Q8NCA9 323 aaPredicted RBP13.02□□□□□ -0.33
PMS2-202ENST00000380416 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.33
PMS2-202ENST00000380416 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
PMS2-202ENST00000380416 ZNF326Q5BKZ1 582 aaKnown RBP13□□□□□ -0.33
PMS2-202ENST00000380416 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
PMS2-202ENST00000380416 PXDNQ92626 1479 aa12.99□□□□□ -0.33
PMS2-202ENST00000380416 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
PMS2-202ENST00000380416 ONECUT3O60422 494 aaPredicted RBP12.99□□□□□ -0.33
PMS2-202ENST00000380416 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
PMS2-202ENST00000380416 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
PMS2-202ENST00000380416 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
PMS2-202ENST00000380416 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
PMS2-202ENST00000380416 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
PMS2-202ENST00000380416 UTRNP46939 3433 aa12.97□□□□□ -0.33
PMS2-202ENST00000380416 NWD2Q9ULI1 1742 aa12.97□□□□□ -0.33
PMS2-202ENST00000380416 ACIN1Q9UKV3 1341 aaKnown RBP12.97□□□□□ -0.33
PMS2-202ENST00000380416 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
PMS2-202ENST00000380416 ORAI2Q96SN7 254 aa12.97□□□□□ -0.33
PMS2-202ENST00000380416 NEXMIFQ5QGS0 1516 aa12.97□□□□□ -0.33
PMS2-202ENST00000380416 RREB1Q92766 1687 aa12.96□□□□□ -0.34
PMS2-202ENST00000380416 METP08581 1390 aa12.95□□□□□ -0.34
PMS2-202ENST00000380416 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
PMS2-202ENST00000380416 HAX1O00165 279 aa12.94□□□□□ -0.34
PMS2-202ENST00000380416 VPS72Q15906 364 aa12.94□□□□□ -0.34
PMS2-202ENST00000380416 CCDC144AA2RUR9 1427 aa12.94□□□□□ -0.34
PMS2-202ENST00000380416 MPHOSPH9Q99550 1183 aa12.93□□□□□ -0.34
PMS2-202ENST00000380416 PPLO60437 1756 aa12.93□□□□□ -0.34
PMS2-202ENST00000380416 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
PMS2-202ENST00000380416 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
PMS2-202ENST00000380416 RAB3GAP2Q9H2M9 1393 aa12.92□□□□□ -0.34
PMS2-202ENST00000380416 CHD4Q14839 1912 aa12.92□□□□□ -0.34
PMS2-202ENST00000380416 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
PMS2-202ENST00000380416 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms