RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SRPK2P78362 688 aaKnown RBP26.68■■□□□ 1.86
PDLIM5-205ENST00000380180 METP08581 1390 aa26.68■■□□□ 1.86
PDLIM5-205ENST00000380180 ABCC11Q96J66 1382 aa26.68■■□□□ 1.86
PDLIM5-205ENST00000380180 SENP3-EIF4A1A0A087X0R7 540 aa26.67■■□□□ 1.86
PDLIM5-205ENST00000380180 WAPLQ7Z5K2 1190 aa26.66■■□□□ 1.86
PDLIM5-205ENST00000380180 BCANQ96GW7 911 aa26.66■■□□□ 1.86
PDLIM5-205ENST00000380180 USP32Q8NFA0 1604 aa26.65■■□□□ 1.86
PDLIM5-205ENST00000380180 ANKRD36BQ8N2N9 1353 aa26.65■■□□□ 1.86
PDLIM5-205ENST00000380180 FKBP8Q14318 412 aa26.64■■□□□ 1.86
PDLIM5-205ENST00000380180 LTKP29376 864 aa26.63■■□□□ 1.85
PDLIM5-205ENST00000380180 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
PDLIM5-205ENST00000380180 PLEKHH1Q9ULM0 1364 aa26.62■■□□□ 1.85
PDLIM5-205ENST00000380180 CDK19Q9BWU1 502 aa26.62■■□□□ 1.85
PDLIM5-205ENST00000380180 ATAD2Q6PL18 1390 aa26.62■■□□□ 1.85
PDLIM5-205ENST00000380180 NINLQ9Y2I6 1382 aa26.62■■□□□ 1.85
PDLIM5-205ENST00000380180 INSRP06213 1382 aa26.61■■□□□ 1.85
PDLIM5-205ENST00000380180 NEFLP07196 543 aa26.61■■□□□ 1.85
PDLIM5-205ENST00000380180 TXNDC2Q86VQ3 553 aa26.6■■□□□ 1.85
PDLIM5-205ENST00000380180 ADAMTS13Q76LX8 1427 aa26.59■■□□□ 1.85
PDLIM5-205ENST00000380180 RIMS1Q86UR5 1692 aaKnown RBP26.59■■□□□ 1.85
PDLIM5-205ENST00000380180 PLEKHG1Q9ULL1 1385 aa26.59■■□□□ 1.85
PDLIM5-205ENST00000380180 CGNL1Q0VF96 1302 aa26.58■■□□□ 1.85
PDLIM5-205ENST00000380180 BLMP54132 1417 aaPredicted RBP26.58■■□□□ 1.85
PDLIM5-205ENST00000380180 SLIT1O75093 1534 aa26.57■■□□□ 1.84
PDLIM5-205ENST00000380180 ADAMTS8Q9UP79 889 aa26.57■■□□□ 1.84
PDLIM5-205ENST00000380180 MORC1Q86VD1 984 aa26.56■■□□□ 1.84
PDLIM5-205ENST00000380180 EID1Q9Y6B2 187 aa26.56■■□□□ 1.84
PDLIM5-205ENST00000380180 ARHGAP23Q9P227 1491 aa26.56■■□□□ 1.84
PDLIM5-205ENST00000380180 A0A1W2PP64 1363 aa26.56■■□□□ 1.84
PDLIM5-205ENST00000380180 TECPR2O15040 1411 aa26.56■■□□□ 1.84
PDLIM5-205ENST00000380180 SMG6Q86US8 1419 aaKnown RBP26.56■■□□□ 1.84
PDLIM5-205ENST00000380180 SIRT1Q96EB6 747 aa26.55■■□□□ 1.84
PDLIM5-205ENST00000380180 WDR43Q15061 677 aaKnown RBP eCLIP26.54■■□□□ 1.84
PDLIM5-205ENST00000380180 THEMISQ8N1K5 641 aaPredicted RBP26.54■■□□□ 1.84
PDLIM5-205ENST00000380180 CPS1P31327 1500 aa26.54■■□□□ 1.84
PDLIM5-205ENST00000380180 FAM135BQ49AJ0 1406 aa26.53■■□□□ 1.84
PDLIM5-205ENST00000380180 CD163L1Q9NR16 1453 aa26.53■■□□□ 1.84
PDLIM5-205ENST00000380180 TERF2IPQ9NYB0 399 aa26.52■■□□□ 1.84
PDLIM5-205ENST00000380180 NUDCQ9Y266 331 aa26.52■■□□□ 1.84
PDLIM5-205ENST00000380180 SALL2Q9Y467 1007 aaPredicted RBP26.51■■□□□ 1.83
PDLIM5-205ENST00000380180 MED14O60244 1454 aa26.51■■□□□ 1.83
PDLIM5-205ENST00000380180 CABP1Q9NZU7 370 aa26.5■■□□□ 1.83
PDLIM5-205ENST00000380180 TNNT2P45379 298 aaPredicted RBP26.49■■□□□ 1.83
PDLIM5-205ENST00000380180 NSD2O96028 1365 aa26.49■■□□□ 1.83
PDLIM5-205ENST00000380180 ADAMTSL3P82987 1691 aa26.49■■□□□ 1.83
PDLIM5-205ENST00000380180 SLC26A8Q96RN1 970 aa26.49■■□□□ 1.83
PDLIM5-205ENST00000380180 WASLO00401 505 aaPredicted RBP26.48■■□□□ 1.83
PDLIM5-205ENST00000380180 CEP170BQ9Y4F5 1589 aaPredicted RBP26.46■■□□□ 1.83
PDLIM5-205ENST00000380180 POLR3AO14802 1390 aaPredicted RBP26.46■■□□□ 1.83
PDLIM5-205ENST00000380180 ROBO2Q9HCK4 1378 aa26.46■■□□□ 1.83
PDLIM5-205ENST00000380180 HDGFL2Q7Z4V5 671 aaPredicted RBP26.46■■□□□ 1.83
PDLIM5-205ENST00000380180 ANKRD26Q9UPS8 1709 aa26.45■■□□□ 1.82
PDLIM5-205ENST00000380180 SETD1BQ9UPS6 1966 aaKnown RBP26.44■■□□□ 1.82
PDLIM5-205ENST00000380180 TBX22Q9Y458 520 aa26.43■■□□□ 1.82
PDLIM5-205ENST00000380180 PTPRUQ92729 1446 aa26.42■■□□□ 1.82
PDLIM5-205ENST00000380180 PDE3BQ13370 1112 aa26.42■■□□□ 1.82
PDLIM5-205ENST00000380180 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.41■■□□□ 1.82
PDLIM5-205ENST00000380180 KIF20BQ96Q89 1820 aa26.41■■□□□ 1.82
PDLIM5-205ENST00000380180 ATP7BP35670 1465 aa26.41■■□□□ 1.82
PDLIM5-205ENST00000380180 FYB1O15117 783 aa26.41■■□□□ 1.82
PDLIM5-205ENST00000380180 IRX6P78412 446 aaPredicted RBP26.41■■□□□ 1.82
PDLIM5-205ENST00000380180 SHPRHQ149N8 1683 aa26.4■■□□□ 1.82
PDLIM5-205ENST00000380180 MTHFSP49914 203 aa26.4■■□□□ 1.82
PDLIM5-205ENST00000380180 GGNBP2Q9H3C7 697 aa26.4■■□□□ 1.82
PDLIM5-205ENST00000380180 NUDT16Q96DE0 195 aaKnown RBP26.38■■□□□ 1.81
PDLIM5-205ENST00000380180 DIP2AQ14689 1571 aa26.38■■□□□ 1.81
PDLIM5-205ENST00000380180 PPIP5K1Q6PFW1 1433 aa26.38■■□□□ 1.81
PDLIM5-205ENST00000380180 AMOTL2Q9Y2J4 779 aa26.37■■□□□ 1.81
PDLIM5-205ENST00000380180 ZNF142P52746 1687 aaPredicted RBP26.36■■□□□ 1.81
PDLIM5-205ENST00000380180 ADGRB2O60241 1585 aa26.36■■□□□ 1.81
PDLIM5-205ENST00000380180 CCDC146Q8IYE0 955 aa26.35■■□□□ 1.81
PDLIM5-205ENST00000380180 CDCA7LQ96GN5 454 aa26.35■■□□□ 1.81
PDLIM5-205ENST00000380180 CCDC61Q9Y6R9 512 aa26.34■■□□□ 1.81
PDLIM5-205ENST00000380180 CPSF1Q10570 1443 aaKnown RBP26.34■■□□□ 1.81
PDLIM5-205ENST00000380180 NCKAP5LQ9HCH0 1330 aa26.33■■□□□ 1.81
PDLIM5-205ENST00000380180 CFAP53Q96M91 514 aa26.32■■□□□ 1.8
PDLIM5-205ENST00000380180 AKAP12Q02952 1782 aa26.31■■□□□ 1.8
PDLIM5-205ENST00000380180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.31■■□□□ 1.8
PDLIM5-205ENST00000380180 ITSN1Q15811 1721 aa26.31■■□□□ 1.8
PDLIM5-205ENST00000380180 PRR36Q9H6K5 1346 aa26.31■■□□□ 1.8
PDLIM5-205ENST00000380180 CDC42BPGQ6DT37 1551 aa26.31■■□□□ 1.8
PDLIM5-205ENST00000380180 MON2Q7Z3U7 1717 aa26.3■■□□□ 1.8
PDLIM5-205ENST00000380180 RNF123Q5XPI4 1314 aa26.29■■□□□ 1.8
PDLIM5-205ENST00000380180 PTCH1Q13635 1447 aa26.29■■□□□ 1.8
PDLIM5-205ENST00000380180 XRN1Q8IZH2 1706 aaKnown RBP26.28■■□□□ 1.8
PDLIM5-205ENST00000380180 APAF1O14727 1248 aa26.28■■□□□ 1.8
PDLIM5-205ENST00000380180 ERICH6BQ5W0A0 696 aa26.28■■□□□ 1.8
PDLIM5-205ENST00000380180 ANKLE2Q86XL3 938 aa26.27■■□□□ 1.8
PDLIM5-205ENST00000380180 ZNF521Q96K83 1311 aa26.27■■□□□ 1.8
PDLIM5-205ENST00000380180 EDC4Q6P2E9 1401 aaKnown RBP26.27■■□□□ 1.8
PDLIM5-205ENST00000380180 MAP2P11137 1827 aaKnown RBP26.26■■□□□ 1.79
PDLIM5-205ENST00000380180 TOPAZ1Q8N9V7 1692 aa26.25■■□□□ 1.79
PDLIM5-205ENST00000380180 PIK3R4Q99570 1358 aa26.23■■□□□ 1.79
PDLIM5-205ENST00000380180 NUTM2FA1L443 756 aa26.22■■□□□ 1.79
PDLIM5-205ENST00000380180 ZNF692Q9BU19 519 aaPredicted RBP26.22■■□□□ 1.79
PDLIM5-205ENST00000380180 CHD2O14647 1828 aaKnown RBP26.22■■□□□ 1.79
PDLIM5-205ENST00000380180 RCAN3Q9UKA8 241 aa26.22■■□□□ 1.79
PDLIM5-205ENST00000380180 RGPD8O14715 1765 aaPredicted RBP26.21■■□□□ 1.79
PDLIM5-205ENST00000380180 KCNA6P17658 529 aa26.21■■□□□ 1.79
PDLIM5-205ENST00000380180 GOLGA2Q08379 1002 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms